MELO3C016704.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C016704.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING-H2 finger protein ATL39-like
Locationchr07 : 2729832 .. 2730317 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGTTTTTTCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG

mRNA sequence

ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGTTTTTTCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG

Coding sequence (CDS)

ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGTTTTTTCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG

Protein sequence

MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Homology
[Close]
BLAST of MELO3C016704.2 vs. NCBI nr
Match: XP_008453063.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo])

HSP 1 Score: 315.8 bits (808), Expect = 8.2e-83
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0 

Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEE 120
           FLDVRRSGGGDEDVEAAMAEERRMKR  +EKLPLPPTVKFGSEKMVRRRSEEECAICLEE
Sbjct: 61  FLDVRRSGGGDEDVEAAMAEERRMKR--AEKLPLPPTVKFGSEKMVRRRSEEECAICLEE 120

Query: 121 FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 162
           FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Sbjct: 121 FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 159

[Close]
BLAST of MELO3C016704.2 vs. NCBI nr
Match: KGN55133.1 (hypothetical protein Csa_4G637730 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 7.2e-79
Identity = 149/161 (92.55%), Postives = 156/161 (96.89%), Query Frame = 0 

Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPES SPPVLHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESPSPPVLHYTVTLDIRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEE 120
           FLDVRR+GGG EDVEAAMAEERR+KR  +EKLPLPPTV+FGSEKMVRRRSEEECAICLEE
Sbjct: 61  FLDVRRNGGGGEDVEAAMAEERRLKR--AEKLPLPPTVRFGSEKMVRRRSEEECAICLEE 120

Query: 121 FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 162
           FL GENCQALPEC+HFFHSECI+VWFSKKFTCPICRNCVAA
Sbjct: 121 FLIGENCQALPECNHFFHSECIDVWFSKKFTCPICRNCVAA 159

[Close]
BLAST of MELO3C016704.2 vs. NCBI nr
Match: XP_022976597.1 (RING-H2 finger protein ATL39-like [Cucurbita maxima])

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 127/162 (78.40%), Postives = 143/162 (88.27%), Query Frame = 0 

Query: 1   MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQ 60
           M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQ
Sbjct: 1   MADPLLTLLFPMETMVSESASPPVIVHYTVTLDLRTSIIFSVTIILFFLFLYHVLSGFLQ 60

Query: 61  WFLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLE 120
           WFL  RR G    DVEA M EERR++R  +EK  +P  V+FGSE+MVRRRSEEECAICLE
Sbjct: 61  WFLSGRRGG----DVEAGMGEERRVRR--AEK--MPAAVRFGSERMVRRRSEEECAICLE 120

Query: 121 EFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 162
           EF+AGENCQALPEC+HFFHS+CI+VWFSKKFTCPICR+C+AA
Sbjct: 121 EFMAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRHCIAA 154

[Close]
BLAST of MELO3C016704.2 vs. NCBI nr
Match: XP_022936829.1 (RING-H2 finger protein ATL39-like [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-62
Identity = 126/162 (77.78%), Postives = 143/162 (88.27%), Query Frame = 0 

Query: 1   MGDPLLTLLFPMETMVPESSSPP-VLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQ 60
           M DPLLTLLFPMETMV ES+SPP V+HYTVTLDLRTS+IFS +IILFFLFL+HVLSGFLQ
Sbjct: 1   MADPLLTLLFPMETMVSESASPPVVVHYTVTLDLRTSMIFSVTIILFFLFLYHVLSGFLQ 60

Query: 61  WFLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLE 120
           WFL  RR G    DVEA M EERR++R  +EK  +P  V+FGSE+MVRRRSEEECAICLE
Sbjct: 61  WFLSGRRGG----DVEAGMGEERRVRR--AEK--MPAAVRFGSERMVRRRSEEECAICLE 120

Query: 121 EFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 162
           EF+AGENCQALPEC+HFFHS+CI+VWFSKKFTCPICR+C+AA
Sbjct: 121 EFMAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRHCIAA 154

[Close]
BLAST of MELO3C016704.2 vs. NCBI nr
Match: XP_023536164.1 (RING-H2 finger protein ATL39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 7.5e-60
Identity = 123/158 (77.85%), Postives = 139/158 (87.97%), Query Frame = 0 

Query: 1   MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQ 60
           M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTSIIFS +IILFFLF++HVLSGFLQ
Sbjct: 1   MADPLLTLLFPMETMVSESASPPVIVHYTVTLDLRTSIIFSVTIILFFLFIYHVLSGFLQ 60

Query: 61  WFLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLE 120
           WFL  RR G    DVEA M EERR++R  +EK  +P  V+FGSE+MVRRRSEEECAICLE
Sbjct: 61  WFLGGRRGG----DVEAGMGEERRVRR--AEK--MPAAVRFGSERMVRRRSEEECAICLE 120

Query: 121 EFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRN 158
           EF+AGENCQALPEC+HFFHS+CI+VWFSKKFTCPICR+
Sbjct: 121 EFMAGENCQALPECNHFFHSDCIDVWFSKKFTCPICRH 150

[Close]
BLAST of MELO3C016704.2 vs. TAIR10
Match: AT1G49220.1 (RING/U-box superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 8.3e-13
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 0 

Query: 85  KRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEV 144
           K +  + L + P V + S +M     +EEC ICL +F++GE  + LP+C+H FH  CI+ 
Sbjct: 107 KGIKKKALRMFPVVSY-SPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 166

Query: 145 WFSKKFTCPICRNCV 160
           W  +  TCP CRNC+
Sbjct: 167 WLQQHLTCPKCRNCL 180

[Close]
BLAST of MELO3C016704.2 vs. TAIR10
Match: AT1G72310.1 (RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 113 ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV 160
           EC+ICL E + G+  + LP+C+H FH ECI++WF    TCPICRN V
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172

[Close]
BLAST of MELO3C016704.2 vs. TAIR10
Match: AT3G18773.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 112 EECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV 160
           EEC ICL +F+AGE  + LP+C+H FH  CI+ W ++  TCP CR+C+
Sbjct: 128 EECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCL 175

[Close]
BLAST of MELO3C016704.2 vs. TAIR10
Match: AT2G35000.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 71  DEDVEAAMAEERRM--KRVFSEKLPLPPTVKFGSEKMVR-RRSEEECAICLEEFLAGENC 130
           D D E+ +   RR+  + + +E +   PT  +   K VR  +   ECA+CL EF   E  
Sbjct: 89  DADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETL 148

Query: 131 QALPECSHFFHSECIEVWFSKKFTCPICR 157
           + +P C H FH++C++VW S+  TCP+CR
Sbjct: 149 RLMPPCCHVFHADCVDVWLSEHSTCPLCR 177

[Close]
BLAST of MELO3C016704.2 vs. TAIR10
Match: AT1G49210.1 (RING/U-box superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0 

Query: 85  KRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEV 144
           K +  + L + P V + S +M      EEC ICL +F++GE  + LP+C+H FH  CI+ 
Sbjct: 107 KGIKKKALRMFPVVSY-SREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 166

Query: 145 WFSKKFTCPICRNCV 160
           W     TCP CR+C+
Sbjct: 167 WLQHHLTCPKCRHCL 180

[Close]
BLAST of MELO3C016704.2 vs. Swiss-Prot
Match: sp|P0C034|ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 0 

Query: 85  KRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEV 144
           K +  + L + P V + S +M     +EEC ICL +F++GE  + LP+C+H FH  CI+ 
Sbjct: 107 KGIKKKALRMFPVVSY-SPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 166

Query: 145 WFSKKFTCPICRNCV 160
           W  +  TCP CRNC+
Sbjct: 167 WLQQHLTCPKCRNCL 180

[Close]
BLAST of MELO3C016704.2 vs. Swiss-Prot
Match: sp|Q9XF63|ATL3_ARATH (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.4e-11
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 113 ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV 160
           EC+ICL E + G+  + LP+C+H FH ECI++WF    TCPICRN V
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172

[Close]
BLAST of MELO3C016704.2 vs. Swiss-Prot
Match: sp|Q8H7N9|ATL31_ORYSJ (E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0188200 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-11
Identity = 33/93 (35.48%), Postives = 46/93 (49.46%), Query Frame = 0 

Query: 66  RSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEK--MVRRRSEEECAICLEEFLA 125
           RS    + V  A A  R  + +  E +   PT  +G  K  M  +    ECA+CL EF  
Sbjct: 83  RSTASHQPVGGAAAASRASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFAD 142

Query: 126 GENCQALPECSHFFHSECIEVWFSKKFTCPICR 157
            +  + LP C H FH +CI+ W +   TCP+CR
Sbjct: 143 SDELRVLPACCHVFHPDCIDPWLAAAVTCPLCR 175

[Close]
BLAST of MELO3C016704.2 vs. Swiss-Prot
Match: sp|Q9LS99|ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-11
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 112 EECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV 160
           EEC ICL +F+AGE  + LP+C+H FH  CI+ W ++  TCP CR+C+
Sbjct: 128 EECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCL 175

[Close]
BLAST of MELO3C016704.2 vs. Swiss-Prot
Match: sp|O64763|ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.5e-11
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 71  DEDVEAAMAEERRM--KRVFSEKLPLPPTVKFGSEKMVR-RRSEEECAICLEEFLAGENC 130
           D D E+ +   RR+  + + +E +   PT  +   K VR  +   ECA+CL EF   E  
Sbjct: 89  DADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETL 148

Query: 131 QALPECSHFFHSECIEVWFSKKFTCPICR 157
           + +P C H FH++C++VW S+  TCP+CR
Sbjct: 149 RLMPPCCHVFHADCVDVWLSEHSTCPLCR 177

[Close]
BLAST of MELO3C016704.2 vs. TrEMBL
Match: tr|A0A1S3BVC7|A0A1S3BVC7_CUCME (RING-H2 finger protein ATL39-like OS=Cucumis melo OX=3656 GN=LOC103493886 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 5.4e-83
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0 

Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEE 120
           FLDVRRSGGGDEDVEAAMAEERRMKR  +EKLPLPPTVKFGSEKMVRRRSEEECAICLEE
Sbjct: 61  FLDVRRSGGGDEDVEAAMAEERRMKR--AEKLPLPPTVKFGSEKMVRRRSEEECAICLEE 120

Query: 121 FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 162
           FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Sbjct: 121 FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 159

[Close]
BLAST of MELO3C016704.2 vs. TrEMBL
Match: tr|A0A0A0L062|A0A0A0L062_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637730 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.8e-79
Identity = 149/161 (92.55%), Postives = 156/161 (96.89%), Query Frame = 0 

Query: 1   MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQW 60
           MGDPLLTLLFPMETMVPES SPPVLHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQW
Sbjct: 1   MGDPLLTLLFPMETMVPESPSPPVLHYTVTLDIRTSIIFSFSIILFFLFLFHVLSGFLQW 60

Query: 61  FLDVRRSGGGDEDVEAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEE 120
           FLDVRR+GGG EDVEAAMAEERR+KR  +EKLPLPPTV+FGSEKMVRRRSEEECAICLEE
Sbjct: 61  FLDVRRNGGGGEDVEAAMAEERRLKR--AEKLPLPPTVRFGSEKMVRRRSEEECAICLEE 120

Query: 121 FLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA 162
           FL GENCQALPEC+HFFHSECI+VWFSKKFTCPICRNCVAA
Sbjct: 121 FLIGENCQALPECNHFFHSECIDVWFSKKFTCPICRNCVAA 159

[Close]
BLAST of MELO3C016704.2 vs. TrEMBL
Match: tr|A0A2I4HI81|A0A2I4HI81_9ROSI (RING-H2 finger protein ATL77-like OS=Juglans regia OX=51240 GN=LOC109018137 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.9e-21
Identity = 67/176 (38.07%), Postives = 88/176 (50.00%), Query Frame = 0 

Query: 21  SPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVR-----RSGGG----D 80
           S P  H+T+TLDL TSII   S++LFFL L H+L  F QW  +VR       G G    D
Sbjct: 16  SSPSFHFTITLDLPTSIIMCISVMLFFLILAHILHAFFQWLKEVRPGYDLEEGEGIHRQD 75

Query: 81  EDVEAAMAE---------------------------ERRMKRVFSEKLPLPPTVKFGSEK 140
            +V   ++                            ERR +R+ + K  LP  V +GS  
Sbjct: 76  MNVSNPISHPAAFYQAIEENNVRVFGILDRFMRDVGERRGQRLRASK-KLPTLVNYGSHG 135

Query: 141 MVRRR-SEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV 160
           +        +CAICLE+F  G++CQ  P C+H FHS CI+ W   K TCP+CRNCV
Sbjct: 136 IKSASFCSTDCAICLEDFAVGDSCQVFPVCNHIFHSNCIDHWLRNKITCPVCRNCV 190

[Close]
BLAST of MELO3C016704.2 vs. TrEMBL
Match: tr|K7M2C6|K7M2C6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102664186 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 0 

Query: 75  EAAMAEERRMKRVFSEKLPLPPTVKFGSEKMVRRRSEEECAICLEEFLAGENCQALPECS 134
           E A  E+R  +   S+K  LPP V +G    V R   EECAIC+EEF   + CQ  PEC 
Sbjct: 105 EGAFNEKRGQRLRASKK--LPPLVNYGKHG-VTRSCGEECAICMEEFKVSQLCQVFPECK 164

Query: 135 HFFHSECIEVWFSKKFTCPICRNCV 160
           H FHS+CI+ W  KK TCPICR+C+
Sbjct: 165 HIFHSDCIDHWLQKKLTCPICRSCI 186

[Close]
BLAST of MELO3C016704.2 vs. TrEMBL
Match: tr|W9QYW3|W9QYW3_9ROSA (E3 ubiquitin-protein ligase ATL76 OS=Morus notabilis OX=981085 GN=L484_002925 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 59/181 (32.60%), Postives = 89/181 (49.17%), Query Frame = 0 

Query: 13  ETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDE 72
           +T +P   S P   YT+TLD   ++I   +I   F+ L+H+L   L W  D+R +    E
Sbjct: 4   QTSIP---SFPSSQYTLTLDFLATLILCVTIAFCFVLLYHILFSLLSWLQDMRSNHNILE 63

Query: 73  D---VEAAMA---------------------------EERRMKRVFSEKLPLPPTVKFGS 132
               +++ M+                           +ERR +R+  E   LPP + +GS
Sbjct: 64  QTQIIDSNMSHQVHFYRSLVQYNAQLIDMLERFVRDIDERRGQRL-RESNRLPPLISYGS 123

Query: 133 EKMVRRRSE----EECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNC 160
            +   RRS     +EC ICLE+   GE+CQ  P C+H FH+ CI+ W   + TCP+CRNC
Sbjct: 124 RE---RRSSYGGGDECVICLEDLEDGESCQVWPVCNHIFHTNCIDHWLKNRHTCPVCRNC 177

The following BLAST results are available for this feature:
BLAST of MELO3C016704.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453063.18.2e-8398.14PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo][more]
KGN55133.17.2e-7992.55hypothetical protein Csa_4G637730 [Cucumis sativus][more]
XP_022976597.12.1e-6278.40RING-H2 finger protein ATL39-like [Cucurbita maxima][more]
XP_022936829.16.1e-6277.78RING-H2 finger protein ATL39-like [Cucurbita moschata][more]
XP_023536164.17.5e-6077.85RING-H2 finger protein ATL39-like [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C016704.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49220.18.3e-1341.33RING/U-box superfamily protein[more]
AT1G72310.12.4e-1255.32RING/U-box superfamily protein[more]
AT3G18773.13.2e-1252.08RING/U-box superfamily protein[more]
AT2G35000.14.1e-1237.08RING/U-box superfamily protein[more]
AT1G49210.11.2e-1140.00RING/U-box superfamily protein[more]
BLAST of MELO3C016704.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P0C034|ATL10_ARATH1.5e-1141.33RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1[more]
sp|Q9XF63|ATL3_ARATH4.4e-1155.32RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1[more]
sp|Q8H7N9|ATL31_ORYSJ5.7e-1135.48E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=3994... [more]
sp|Q9LS99|ATL77_ARATH5.7e-1152.08RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1[more]
sp|O64763|ATL9_ARATH7.5e-1137.08E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV... [more]
BLAST of MELO3C016704.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BVC7|A0A1S3BVC7_CUCME5.4e-8398.14RING-H2 finger protein ATL39-like OS=Cucumis melo OX=3656 GN=LOC103493886 PE=4 S... [more]
tr|A0A0A0L062|A0A0A0L062_CUCSA4.8e-7992.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637730 PE=4 SV=1[more]
tr|A0A2I4HI81|A0A2I4HI81_9ROSI5.9e-2138.07RING-H2 finger protein ATL77-like OS=Juglans regia OX=51240 GN=LOC109018137 PE=4... [more]
tr|K7M2C6|K7M2C6_SOYBN1.3e-1550.59Uncharacterized protein OS=Glycine max OX=3847 GN=102664186 PE=4 SV=1[more]
tr|W9QYW3|W9QYW3_9ROSA1.7e-1532.60E3 ubiquitin-protein ligase ATL76 OS=Morus notabilis OX=981085 GN=L484_002925 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016704.2.1MELO3C016704.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 114..155
e-value: 1.7E-6
score: 37.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 113..156
e-value: 2.5E-13
score: 50.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 114..156
score: 12.534
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 71..160
e-value: 1.8E-18
score: 68.0
NoneNo IPR availablePANTHERPTHR14155:SF456RING-H2 FINGER PROTEIN ATL60coord: 33..157
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 33..157
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 109..159

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016704.2Csa4G637730Cucumber (Chinese Long) v2cumedB298
MELO3C016704.2CSPI04G23540Wild cucumber (PI 183967)cpimedB302
MELO3C016704.2Cucsa.123190Cucumber (Gy14) v1cgymedB187
MELO3C016704.2CmaCh09G008700Cucurbita maxima (Rimu)cmamedB040
MELO3C016704.2CmoCh09G008580Cucurbita moschata (Rifu)cmomedB030
MELO3C016704.2Cp4.1LG06g07020Cucurbita pepo (Zucchini)cpemedB868
MELO3C016704.2Cla023389Watermelon (97103) v1medwmB531
MELO3C016704.2Carg17104Silver-seed gourdcarmedB0178
MELO3C016704.2CsaV3_4G033750Cucumber (Chinese Long) v3cucmedB308
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016704.2Cucumber (Gy14) v2cgybmedB267
MELO3C016704.2Cucurbita maxima (Rimu)cmamedB504
MELO3C016704.2Cucurbita moschata (Rifu)cmomedB491
MELO3C016704.2Cucurbita pepo (Zucchini)cpemedB643
MELO3C016704.2Bottle gourd (USVL1VR-Ls)lsimedB333
MELO3C016704.2Watermelon (Charleston Gray)medwcgB457
MELO3C016704.2Silver-seed gourdcarmedB0322
MELO3C016704.2Watermelon (97103) v2medwmbB467
MELO3C016704.2Wax gourdmedwgoB601