MELO3C016113 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCACCTCCTTCTCTCTTAATACTCACGATCCATCTCAGATCTCATCTCTCTCAACTCCCGTCACGTTCACGTTCCCTCCATCCTTGACCTGCCACCGTTCCACCTCCGTCTCACCTCTCTGACTCTCACTTCACGGCTCCACCTACAGCCGGCATCCAGCACGTTGCCACCGCCTTCGGATCCGTACAGTGACTCAACACAAACCCTTCGTTCGGGTTTTGGGTTATTTGATTACAAAGGTGTTTGAGAAAATGTCTTAATGGGATCGTTGAAAATAAATTCTATTCTTTTTATTTGACGTAATTGCGTCGTCTTTTGAGATCATTTGGAGCTCTTTAACTTTTTTCTTTTGTTTATTATTTTTGTTTTTCTGTTTGATAATTAAAATTTTGCTGAAGTTCAAACCAATTATTCTGTTTGATGATTCTACCAGATAATCTCAACAAATTAATTTTCATTAACAAACATCCACAGCTTCCAATTTTCAGATCTCTATTGTTTTTTTGCATGTTCCATGATTTTATTGGATATATCCGTGATTAGGGGTTTTCTTTATCAATTTTGGTTCTACGAATCGGTAGATTGTCTAGATCTGTTGAATGTAATGTTCGATTATTGACTTTTTTTTTTTTTTTTTGTTTTCCTTTTGTTGATAATAAGTTGGTTGAAGGAAAATGGGAGGTGGGTTTAGAGTCCTTCATCTCGTCAGACCGTTCCTTTCGTTTCTTCCCGAGGTGCAGAGTGCCGATCGGAAAATTCCATTCAGAGAGAAGGTTATTTATACTGTCATCGCTCTCTTCATCTTCTTGGTATGCAGCCAGCTTCCTCTATATGGGATTCACTCCACCACGGGCGCAGATCCGTTTTATTGGATGCGTGTTATCCTAGCTTCCAATCGTGGTACTGTCATGGAGCTTGGGATCACCCCCATCGTCACATCTGGGATGGTGATGCAACTCCTCGTTGGGTCCAAGATTATTGAGGTCGACAACAATGTGCGGGAGGACCGTGCTCTCTTGTAAGTTTTTGTATATCCATATAGACACACGCATATTTATTTGTCGTGCTTGCTGATGGTTGAGGTTCATAGGCGGAGATATTGTTCGATATGGGTAGGCAATTTTATAACTTGTGTTGATCTGTCCTCCTGTTGTGTTCATTTCAAACTTTTTCCGTAGATGTTCCATTTTAAATTGTGCCGCATTAGCTTTTCTGCATTGTGAAAAAATTTCGTCTGTTAATATTTGTTAATTTACCTTTTATAAATTCTTTTAGAATCATAGCCTTTATTGAACATTTTGTTTGAAGAAATAGTTGTTACAAAGCTGTAGTTTGTAATTGAAGTTTGATGCATCATGCATACAATAGTTTATTTTCTCTAAGTTCTGCGTATTGTTGAAAACGATGGCTTGAATTTCTGTGGCTGCTTTTCTTGTTGATTAAGTGCGATGACGTCTGTTATAATTTACCTACAAATGGCGACGTTTGTAGCATTTCATTTTTCATAAAGTTATTATTATTATAGTTGATCGTGAATGCATTGAGATAATGTTTCCTGGTTGTTTTGGTTACATATTGCTAGTATGATTCCTTTTCTGATCTATATTCACTTTTGCATTATAATTTAACTTGTATACATCTTTCCCCAATTATTTTCCACTGTCAGAAACGGTGCACAGAAATTGCTGGGTATCCTCATAGCCATAGGTGAAGCAGTTGCTTATGTTCTTTCCGGAATGTATGGTAGCGTTAGCCAACTTGGGGTGGGAAATGCTATTCTTATAATTGTTCAGCTGTGCTTTGCCGGTATTGTTGTCATATGCTTGGATGAGCTTCTCCAGAAGGGATATGGTTTAGGATCTGGAATTTCCCTCTTCATAGCAACGAACATGTGGTAA CCCACCTCCTTCTCTCTTAATACTCACGATCCATCTCAGATCTCATCTCTCTCAACTCCCGTCACGTTCACGTTCCCTCCATCCTTGACCTGCCACCGTTCCACCTCCGTCTCACCTCTCTGACTCTCACTTCACGGCTCCACCTACAGCCGGCATCCAGCACGTTGCCACCGCCTTCGGATCCGTACAGTGACTCAACACAAACCCTTCGTTCGGGTTTTGGGTTATTTGATTACAAAGTTGGTTGAAGGAAAATGGGAGGTGGGTTTAGAGTCCTTCATCTCGTCAGACCGTTCCTTTCGTTTCTTCCCGAGGTGCAGAGTGCCGATCGGAAAATTCCATTCAGAGAGAAGGTTATTTATACTGTCATCGCTCTCTTCATCTTCTTGGTATGCAGCCAGCTTCCTCTATATGGGATTCACTCCACCACGGGCGCAGATCCGTTTTATTGGATGCGTGTTATCCTAGCTTCCAATCGTGGTACTGTCATGGAGCTTGGGATCACCCCCATCGTCACATCTGGGATGGTGATGCAACTCCTCGTTGGGTCCAAGATTATTGAGGTCGACAACAATGTGCGGGAGGACCGTGCTCTCTTAAACGGTGCACAGAAATTGCTGGGTATCCTCATAGCCATAGGTGAAGCAGTTGCTTATGTTCTTTCCGGAATGTATGGTAGCGTTAGCCAACTTGGGGTGGGAAATGCTATTCTTATAATTGTTCAGCTGTGCTTTGCCGGTATTGTTGTCATATGCTTGGATGAGCTTCTCCAGAAGGGATATGGTTTAGGATCTGGAATTTCCCTCTTCATAGCAACGAACATGTGGTAA ATGGGAGGTGGGTTTAGAGTCCTTCATCTCGTCAGACCGTTCCTTTCGTTTCTTCCCGAGGTGCAGAGTGCCGATCGGAAAATTCCATTCAGAGAGAAGGTTATTTATACTGTCATCGCTCTCTTCATCTTCTTGGTATGCAGCCAGCTTCCTCTATATGGGATTCACTCCACCACGGGCGCAGATCCGTTTTATTGGATGCGTGTTATCCTAGCTTCCAATCGTGGTACTGTCATGGAGCTTGGGATCACCCCCATCGTCACATCTGGGATGGTGATGCAACTCCTCGTTGGGTCCAAGATTATTGAGGTCGACAACAATGTGCGGGAGGACCGTGCTCTCTTAAACGGTGCACAGAAATTGCTGGGTATCCTCATAGCCATAGGTGAAGCAGTTGCTTATGTTCTTTCCGGAATGTATGGTAGCGTTAGCCAACTTGGGGTGGGAAATGCTATTCTTATAATTGTTCAGCTGTGCTTTGCCGGTATTGTTGTCATATGCTTGGATGAGCTTCTCCAGAAGGGATATGGTTTAGGATCTGGAATTTCCCTCTTCATAGCAACGAACATGTGGTAA MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVLSGMYGSVSQLGVGNAILIIVQLCFAGIVVICLDELLQKGYGLGSGISLFIATNMW*
BLAST of MELO3C016113 vs. Swiss-Prot
Match: SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 4.4e-71 Identity = 133/187 (71.12%), Postives = 155/187 (82.89%), Query Frame = 1
BLAST of MELO3C016113 vs. Swiss-Prot
Match: SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-69 Identity = 127/187 (67.91%), Postives = 153/187 (81.82%), Query Frame = 1
BLAST of MELO3C016113 vs. Swiss-Prot
Match: SC61A_HARAN (Protein transport protein Sec61 subunit alpha OS=Harpagifer antarcticus GN=sec61a PE=2 SV=3) HSP 1 Score: 255.0 bits (650), Expect = 6.6e-67 Identity = 123/187 (65.78%), Postives = 154/187 (82.35%), Query Frame = 1
BLAST of MELO3C016113 vs. Swiss-Prot
Match: SC61A_DISMA (Protein transport protein Sec61 subunit alpha OS=Dissostichus mawsoni GN=sec61a PE=2 SV=3) HSP 1 Score: 255.0 bits (650), Expect = 6.6e-67 Identity = 123/187 (65.78%), Postives = 154/187 (82.35%), Query Frame = 1
BLAST of MELO3C016113 vs. Swiss-Prot
Match: SC61A_PAGBO (Protein transport protein Sec61 subunit alpha OS=Pagothenia borchgrevinki GN=sec61a PE=2 SV=3) HSP 1 Score: 254.6 bits (649), Expect = 8.6e-67 Identity = 123/187 (65.78%), Postives = 153/187 (81.82%), Query Frame = 1
BLAST of MELO3C016113 vs. TrEMBL
Match: A0A0A0LBY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812150 PE=3 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 2.0e-99 Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of MELO3C016113 vs. TrEMBL
Match: A0A059BNX0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01316 PE=3 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 1.7e-98 Identity = 184/191 (96.34%), Postives = 189/191 (98.95%), Query Frame = 1
BLAST of MELO3C016113 vs. TrEMBL
Match: F6H1W7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01020 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.5e-97 Identity = 183/190 (96.32%), Postives = 189/190 (99.47%), Query Frame = 1
BLAST of MELO3C016113 vs. TrEMBL
Match: A9PG45_POPTR (Transport protein sec61 OS=Populus trichocarpa GN=POPTR_0011s10920g PE=2 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 1.9e-97 Identity = 183/190 (96.32%), Postives = 188/190 (98.95%), Query Frame = 1
BLAST of MELO3C016113 vs. TrEMBL
Match: B9N8W6_POPTR (Transport protein sec61 OS=Populus trichocarpa GN=POPTR_0001s39590g PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 1.9e-97 Identity = 183/190 (96.32%), Postives = 188/190 (98.95%), Query Frame = 1
BLAST of MELO3C016113 vs. TAIR10
Match: AT1G29310.1 (AT1G29310.1 SecY protein transport family protein) HSP 1 Score: 354.4 bits (908), Expect = 4.5e-98 Identity = 180/190 (94.74%), Postives = 184/190 (96.84%), Query Frame = 1
BLAST of MELO3C016113 vs. TAIR10
Match: AT2G34250.1 (AT2G34250.1 SecY protein transport family protein) HSP 1 Score: 354.0 bits (907), Expect = 5.9e-98 Identity = 179/190 (94.21%), Postives = 184/190 (96.84%), Query Frame = 1
BLAST of MELO3C016113 vs. TAIR10
Match: AT1G78720.1 (AT1G78720.1 SecY protein transport family protein) HSP 1 Score: 347.1 bits (889), Expect = 7.2e-96 Identity = 173/190 (91.05%), Postives = 183/190 (96.32%), Query Frame = 1
BLAST of MELO3C016113 vs. NCBI nr
Match: gi|659102450|ref|XP_008452137.1| (PREDICTED: protein transport protein Sec61 subunit alpha-like, partial [Cucumis melo]) HSP 1 Score: 370.2 bits (949), Expect = 2.2e-99 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of MELO3C016113 vs. NCBI nr
Match: gi|449437621|ref|XP_004136590.1| (PREDICTED: protein transport protein Sec61 subunit alpha [Cucumis sativus]) HSP 1 Score: 369.8 bits (948), Expect = 2.9e-99 Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of MELO3C016113 vs. NCBI nr
Match: gi|659102448|ref|XP_008452136.1| (PREDICTED: protein transport protein Sec61 subunit alpha-like, partial [Cucumis melo]) HSP 1 Score: 369.8 bits (948), Expect = 2.9e-99 Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of MELO3C016113 vs. NCBI nr
Match: gi|659084871|ref|XP_008443118.1| (PREDICTED: protein transport protein Sec61 subunit alpha-like [Cucumis melo]) HSP 1 Score: 369.8 bits (948), Expect = 2.9e-99 Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of MELO3C016113 vs. NCBI nr
Match: gi|702365927|ref|XP_010060738.1| (PREDICTED: protein transport protein Sec61 subunit alpha-like [Eucalyptus grandis]) HSP 1 Score: 366.7 bits (940), Expect = 2.5e-98 Identity = 184/191 (96.34%), Postives = 189/191 (98.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |