MELO3C016112.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAATTCAAAGAAGGCGGCTGCCTTATAAACCTCCATTTTAAGATCTTCATCTCATTCCTCCGAATTCAACCAATCCTTACGATTTTCCGTCTCTTTTGACTCTTCCTCTTGCTGCGACACGGTCCGTTTCTAAATCTCCGCTCTTCCTTTCATTAACTTCTCTCTTCTCCTTCATTTTCATATCGCTTCCAATTTCGGATCTCTTTTGGTTTTTGCATGTTACATGTATATGTTCATAGACTCACGCGCGCGATTTCTTTGTTGATTTATCGTGCTTTTGCTGATTGTTGGGATTCATAGATGGATATATTATTCGATATTGCTTGCCAATTTGATAATCTTTTTTACCATGCATCCTCCTGTTGCATTCATTTAAGATTTTTCGCGTAGATTTTCCATTTTCAATCGTGCCCGACATTAGCTTTTTTGAATTGTGAAAGTTTCTGGTTTTTTAATTGAATTTTCTTATTTGCAAATTGATCGTCGTTGCCTAATTAGTTTTAGTAGACTAAGAAAGAAAAGTTGTTATTCTTTTACAACAATTACTAATTTTTGTTGTTCTTCCGTGTATTATTTAATGATTTTTGTTGTTTTTTTTCAAGATAATTGACTATAAGGAAGATGGGAGGTGGGTTTAGAGTCCTTCATCTGGTCAGGCCATTCCTTTCGTTTCTCCCTGAGGTGCAGAGTGCCGATCGGAAAATTCCATTCAGAGAGAAGGTCATTTATACTGTCATCGCACTTTTCATCTTCTTGGTATGCAGCCAGCTTCCTCTGTATGGGATTCACTCCACCACGGGCGCAGATCCGTTTTATTGGATGCGTGTTATCCTAGCTTCCAATCGTGGTACCGTCATGGAGCTTGGGATCACCCCCATCGTCACATCTGGGATGGTGATGCAACTCCTCGTTGGATCCAAGATTATTGAAGTCGACAACAATGTGCGGGAGGATCGTGCACTCTTGTAAGTTCTTATATATTTATATAGACACACACGCACGAGATTTGTTTGTTGATTTACCGTGCTTGCTGAATGTTGAGGTTCATAGATGGAGATATTATTCGATATGGGTATGCAATTTTATGACTTGTGTTGACCATGCATCCTCCTGTTGTATTCATTTAAAATTTTTCGCATAGATGTTTCATTTTCAATGTGCCCAGCATTAGCTTTTCTTTATTTTGAAAGAATTTCGTTTGCTAATATTTGTTAATTTACATTTTATAAATGCTTTAAGAATCATAGATTTCATTAAATGTTTTGTTTGAAGAACTAGTTGTTACAAAGCTGCAGTTTGTAATTGAAGTTCGATGCATCATGCATGCTATAGTGTATTTCTTTAAGTTATGCGTATTGTTGAACAATGATGACTTGAATTGTGCCTGCTTTTCTTGTTGATTTAGTGCGATGACGTCTGTTATAAGAATTTACTTACAATGATGACGTTTGTAGCATTTCATTTTTCATAAAGTTATTATTATTATAGTTGATCGTGAATGCATTGAAATAATGTTTCCTTGTTGTTTGGGTTTCCATATTGCTAGTATGATTCTTTTTCTGATCTATATTCACTTTTGCATTCTAATTTAACTTGTATACATCTTTCTCCAATTATTTTCCACTGTCAGAAACGGTGCACAGAAATTGCTGGGCATCCTCATAGCCGTTGGTGAAGCGGTTGCTTATGTTCTTTCCGGAATGTATGGTAGCGTTAGCCAACTTGGGGTGGGAAATGCTATTCTTATAATTGTTCAGCTGTGCTTCGCCGGTATTGTTGTCATATGCTTGGATGAGCTTCTCCAGAAGGGATATGGTTTAGGATCTGGAATTTCCCTCTTCATAGCAACGAACATGTGGTAAGTTCTGGTTCTCCTACCTTTCTGTCATCCTTTATCATTGAACTGAAGTGTTGACATATTTTCTCGTTGCTGTCATTAATGAACTTCTCAAAATTGTCTGGATTCTGCAGTGAGAACATTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATTTTGCTTGCAGTGACAATTATTTATCAGTACTTCGAGACCTTCGAGAAGGAGAAAGTCAGCGAATTGGGTCTGTTTGGTTTCTAAATTTTTTCAATTCGGTTTAAGTTATAAACTTTTGGTGGTGCCAAAGAGCTCCCTGTTAATTTTGGTGCCTTGGGATTTTCACAAGCCTCTAATTGTATGAATATTTTAGATTAGAAACGTTACAAGTTTTGAAGTAAAGTATAAAATTGATATATTTTAGCGGAACTCCTTCATTTAGAGCCAAACATCTCTAATAACATTAAAATAGTTTTGTTTATTTTGAATTTTGCTTAATTAAAACATTTTTATATAGTTATGATTGTGTCAAATTTCATAAATAGTTTATAGACTATATTTTTCCACTCTGAAAAAATAATATGTATCTATTTATTTTTCTTGATAAGCTAAAATTTTAATGCAGTAATAAGATAGGTGTTTAAATTAAAAAAATATATATATGCCAAAATCTAAAAAGAACACCAACTCATACTTGTGTCAATATTGTAGTGATATTAATTATTAATTAGATTTGATAAAAATATAATTATCAAGTAAATGCCAAAAAGAGTAAACTAGCACATGAGATCTTCTGTTTGAATTCATTTTCTTTGCAAGTTACCTTCATCCCCAAAAGGTATGCATTTGGTTTTAAGTTTTTATTTAACTTTTTAGCTTTTGA GAATTCAAAGAAGGCGGCTGCCTTATAAACCTCCATTTTAAGATCTTCATCTCATTCCTCCGAATTCAACCAATCCTTACGATTTTCCGTCTCTTTTGACTCTTCCTCTTGCTGCGACACGATAATTGACTATAAGGAAGATGGGAGGTGGGTTTAGAGTCCTTCATCTGGTCAGGCCATTCCTTTCGTTTCTCCCTGAGGTGCAGAGTGCCGATCGGAAAATTCCATTCAGAGAGAAGGTCATTTATACTGTCATCGCACTTTTCATCTTCTTGGTATGCAGCCAGCTTCCTCTGTATGGGATTCACTCCACCACGGGCGCAGATCCGTTTTATTGGATGCGTGTTATCCTAGCTTCCAATCGTGGTACCGTCATGGAGCTTGGGATCACCCCCATCGTCACATCTGGGATGGTGATGCAACTCCTCGTTGGATCCAAGATTATTGAAGTCGACAACAATGTGCGGGAGGATCGTGCACTCTTAAACGGTGCACAGAAATTGCTGGGCATCCTCATAGCCGTTGGTGAAGCGGTTGCTTATGTTCTTTCCGGAATGTATGGTAGCGTTAGCCAACTTGGGGTGGGAAATGCTATTCTTATAATTGTTCAGCTGTGCTTCGCCGGTATTGTTGTCATATGCTTGGATGAGCTTCTCCAGAAGGGATATGGTTTAGGATCTGGAATTTCCCTCTTCATAGCAACGAACATGTGCTTTTGA ATGGGAGGTGGGTTTAGAGTCCTTCATCTGGTCAGGCCATTCCTTTCGTTTCTCCCTGAGGTGCAGAGTGCCGATCGGAAAATTCCATTCAGAGAGAAGGTCATTTATACTGTCATCGCACTTTTCATCTTCTTGGTATGCAGCCAGCTTCCTCTGTATGGGATTCACTCCACCACGGGCGCAGATCCGTTTTATTGGATGCGTGTTATCCTAGCTTCCAATCGTGGTACCGTCATGGAGCTTGGGATCACCCCCATCGTCACATCTGGGATGGTGATGCAACTCCTCGTTGGATCCAAGATTATTGAAGTCGACAACAATGTGCGGGAGGATCGTGCACTCTTAAACGGTGCACAGAAATTGCTGGGCATCCTCATAGCCGTTGGTGAAGCGGTTGCTTATGTTCTTTCCGGAATGTATGGTAGCGTTAGCCAACTTGGGGTGGGAAATGCTATTCTTATAATTGTTCAGCTGTGCTTCGCCGGTATTGTTGTCATATGCTTGGATGAGCTTCTCCAGAAGGGATATGGTTTAGGATCTGGAATTTCCCTCTTCATAGCAACGAACATGTGCTTTTGA MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQLGVGNAILIIVQLCFAGIVVICLDELLQKGYGLGSGISLFIATNMCF
BLAST of MELO3C016112.2 vs. NCBI nr
Match: XP_004136590.1 (PREDICTED: protein transport protein Sec61 subunit alpha [Cucumis sativus] >XP_004137223.1 PREDICTED: protein transport protein Sec61 subunit alpha-like [Cucumis sativus] >XP_011652123.1 PREDICTED: protein transport protein Sec61 subunit alpha [Cucumis sativus] >KGN53583.1 hypothetical protein Csa_4G083570 [Cucumis sativus] >KGN59343.1 hypothetical protein Csa_3G812150 [Cucumis sativus]) HSP 1 Score: 369.0 bits (946), Expect = 9.7e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. NCBI nr
Match: XP_008443118.1 (PREDICTED: protein transport protein Sec61 subunit alpha-like [Cucumis melo] >XP_022142804.1 protein transport protein Sec61 subunit alpha-like [Momordica charantia]) HSP 1 Score: 369.0 bits (946), Expect = 9.7e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. NCBI nr
Match: XP_016901148.1 (PREDICTED: protein transport protein Sec61 subunit alpha-like, partial [Cucumis melo]) HSP 1 Score: 369.0 bits (946), Expect = 9.7e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. NCBI nr
Match: XP_022942548.1 (protein transport protein Sec61 subunit alpha-like [Cucurbita moschata] >XP_022931407.1 protein transport protein Sec61 subunit alpha-like [Cucurbita moschata] >XP_022980723.1 protein transport protein Sec61 subunit alpha-like [Cucurbita maxima] >XP_022984325.1 protein transport protein Sec61 subunit alpha-like [Cucurbita maxima] >XP_022984326.1 protein transport protein Sec61 subunit alpha-like [Cucurbita maxima] >XP_023542606.1 protein transport protein Sec61 subunit alpha-like [Cucurbita pepo subsp. pepo] >XP_023552144.1 protein transport protein Sec61 subunit alpha-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 369.0 bits (946), Expect = 9.7e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. NCBI nr
Match: XP_008452137.1 (PREDICTED: protein transport protein Sec61 subunit alpha-like, partial [Cucumis melo]) HSP 1 Score: 368.6 bits (945), Expect = 1.3e-98 Identity = 190/191 (99.48%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TAIR10
Match: AT1G29310.1 (SecY protein transport family protein) HSP 1 Score: 352.8 bits (904), Expect = 1.3e-97 Identity = 180/191 (94.24%), Postives = 187/191 (97.91%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TAIR10
Match: AT2G34250.1 (SecY protein transport family protein) HSP 1 Score: 352.4 bits (903), Expect = 1.7e-97 Identity = 179/191 (93.72%), Postives = 187/191 (97.91%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TAIR10
Match: AT1G78720.1 (SecY protein transport family protein) HSP 1 Score: 346.3 bits (887), Expect = 1.2e-95 Identity = 175/191 (91.62%), Postives = 186/191 (97.38%), Query Frame = 0
BLAST of MELO3C016112.2 vs. Swiss-Prot
Match: sp|P38379|SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina OX=3034 PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.3e-70 Identity = 133/188 (70.74%), Postives = 158/188 (84.04%), Query Frame = 0
BLAST of MELO3C016112.2 vs. Swiss-Prot
Match: sp|Q54XK2|SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum OX=44689 GN=sec61a PE=3 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69 Identity = 129/188 (68.62%), Postives = 156/188 (82.98%), Query Frame = 0
BLAST of MELO3C016112.2 vs. Swiss-Prot
Match: sp|Q7T277|SC61A_DISMA (Protein transport protein Sec61 subunit alpha OS=Dissostichus mawsoni OX=36200 GN=sec61a PE=2 SV=3) HSP 1 Score: 253.1 bits (645), Expect = 2.5e-66 Identity = 123/188 (65.43%), Postives = 157/188 (83.51%), Query Frame = 0
BLAST of MELO3C016112.2 vs. Swiss-Prot
Match: sp|Q7T278|SC61A_HARAN (Protein transport protein Sec61 subunit alpha OS=Harpagifer antarcticus OX=43256 GN=sec61a PE=2 SV=3) HSP 1 Score: 253.1 bits (645), Expect = 2.5e-66 Identity = 123/188 (65.43%), Postives = 157/188 (83.51%), Query Frame = 0
BLAST of MELO3C016112.2 vs. Swiss-Prot
Match: sp|Q8AY35|SC61A_NOTAN (Protein transport protein Sec61 subunit alpha OS=Notothenia angustata OX=8210 GN=sec61a PE=2 SV=3) HSP 1 Score: 252.7 bits (644), Expect = 3.3e-66 Identity = 123/188 (65.43%), Postives = 156/188 (82.98%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TrEMBL
Match: tr|A0A0A0LBY7|A0A0A0LBY7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812150 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 6.4e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TrEMBL
Match: tr|A0A1S3B825|A0A1S3B825_CUCME (protein transport protein Sec61 subunit alpha-like OS=Cucumis melo OX=3656 GN=LOC103486806 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 6.4e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TrEMBL
Match: tr|A0A1S4DYU8|A0A1S4DYU8_CUCME (protein transport protein Sec61 subunit alpha-like OS=Cucumis melo OX=3656 GN=LOC103493234 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 6.4e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TrEMBL
Match: tr|A0A1S3BSJ3|A0A1S3BSJ3_CUCME (protein transport protein Sec61 subunit alpha-like OS=Cucumis melo OX=3656 GN=LOC103493235 PE=3 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 8.4e-99 Identity = 190/191 (99.48%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of MELO3C016112.2 vs. TrEMBL
Match: tr|F6H1W7|F6H1W7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g01020 PE=3 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 4.6e-97 Identity = 185/191 (96.86%), Postives = 190/191 (99.48%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|