MELO3C016069 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016069
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDisease resistance protein (CC-NBS-LRR class) family
Locationchr7 : 18453629 .. 18454123 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTACAAAGGATACATCATTGAAGAAGAACACTACGCCATGGTCGAAGGGAAAAAAGTTGATTTTGGGCCAGATGCAATCAATCAACTCTTTGGGTTAGAGGCGAAAGAGATAGAACATGCAATTTTCAAAAACCCACAAGAGCGAGATTTAGAAGATGCATTAAAGAGAGTAGCTTGGCCCAGGACAAAATGGGACATAATGCCAACAGGGAAGTATCAACTCTTTCTGCAGAACCTGAACACAGAAGCCATCATCTGGTTGGTTTTTGTGAAGAACGATATCAGGCCTACTCGTCATGATAGCACCATATCTATGGAGCATATCATGTTGGTTTATTGCATAATGGAGCATCTTTTGGTGAACATAGTCGAGATAATAAGCGAGCACATCATAGCTTGGGTTAAGCATCCTCGCAGAACAAGACCCTTCTCGCACTTGATTGAGAAATTATGCTTAAAGGCATGCCCAACGTCAGAGCAGCTTGCTTAA

mRNA sequence

ATGTTTTACAAAGGATACATCATTGAAGAAGAACACTACGCCATGGTCGAAGGGAAAAAAGTTGATTTTGGGCCAGATGCAATCAATCAACTCTTTGGGTTAGAGGCGAAAGAGATAGAACATGCAATTTTCAAAAACCCACAAGAGCGAGATTTAGAAGATGCATTAAAGAGAGTAGCTTGGCCCAGGACAAAATGGGACATAATGCCAACAGGGAAGTATCAACTCTTTCTGCAGAACCTGAACACAGAAGCCATCATCTGGTTGGTTTTTGTGAAGAACGATATCAGGCCTACTCGTCATGATAGCACCATATCTATGGAGCATATCATGTTGGTTTATTGCATAATGGAGCATCTTTTGGTGAACATAGTCGAGATAATAAGCGAGCACATCATAGCTTGGGTTAAGCATCCTCGCAGAACAAGACCCTTCTCGCACTTGATTGAGAAATTATGCTTAAAGGCATGCCCAACGTCAGAGCAGCTTGCTTAA

Coding sequence (CDS)

ATGTTTTACAAAGGATACATCATTGAAGAAGAACACTACGCCATGGTCGAAGGGAAAAAAGTTGATTTTGGGCCAGATGCAATCAATCAACTCTTTGGGTTAGAGGCGAAAGAGATAGAACATGCAATTTTCAAAAACCCACAAGAGCGAGATTTAGAAGATGCATTAAAGAGAGTAGCTTGGCCCAGGACAAAATGGGACATAATGCCAACAGGGAAGTATCAACTCTTTCTGCAGAACCTGAACACAGAAGCCATCATCTGGTTGGTTTTTGTGAAGAACGATATCAGGCCTACTCGTCATGATAGCACCATATCTATGGAGCATATCATGTTGGTTTATTGCATAATGGAGCATCTTTTGGTGAACATAGTCGAGATAATAAGCGAGCACATCATAGCTTGGGTTAAGCATCCTCGCAGAACAAGACCCTTCTCGCACTTGATTGAGAAATTATGCTTAAAGGCATGCCCAACGTCAGAGCAGCTTGCTTAA

Protein sequence

MFYKGYIIEEEHYAMVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIAWVKHPRRTRPFSHLIEKLCLKACPTSEQLA*
Homology
[Close]
BLAST of MELO3C016069 vs. TrEMBL
Match: A0A0A0LAY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.0e-35
Identity = 81/166 (48.80%), Postives = 103/166 (62.05%), Query Frame = 1 

Query: 2   FYKGYIIEEEHYAMVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAW 61
           FYKGYI EE+ Y M++G+K                             +D+++ALK+V  
Sbjct: 35  FYKGYINEEQQYVMIKGQK-----------------------------QDVDEALKKVVC 94

Query: 62  PRTKWDIMPTGKYQL-----FLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCI 121
            +TKWD M  G YQ+     FL N NT+A +WLVFVK  I  TR DSTISM+ IML+YCI
Sbjct: 95  SKTKWDKMSIGTYQIRMGLIFLHNPNTDASVWLVFVKKKIMSTRPDSTISMDKIMLIYCI 154

Query: 122 MEHLLVNIVEIISEHIIAWVKHPRRTRPFSHLIEKLCLKACPTSEQ 163
           ME + VN+ EII +HI+AW+KHP   RPF HLIEKLCLKAC T ++
Sbjct: 155 MEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLTKKE 171

[Close]
BLAST of MELO3C016069 vs. TrEMBL
Match: A0A0A0L2P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G569710 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.8e-26
Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 1 

Query: 38  EIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIR 97
           EI H I KNP+ +DLE ALK+V WP T  DI PTGKYQL   NLNTEAIIWLVFVK  I 
Sbjct: 4   EIGHDILKNPRAQDLESALKKVVWPETMLDITPTGKYQLLPHNLNTEAIIWLVFVKKKIM 63

Query: 98  PTRHDSTISMEHIMLVYCIMEHLLVNI 125
           PTRHD+ ISME +MLVYCIM+ +LV +
Sbjct: 64  PTRHDNNISMERVMLVYCIMKEILVEV 90

[Close]
BLAST of MELO3C016069 vs. TrEMBL
Match: A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.3e-21
Identity = 53/77 (68.83%), Postives = 62/77 (80.52%), Query Frame = 1 

Query: 87  IWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIAWVKHPRRTRPFS 146
           IWLV +K  I PTRH STISME +MLVYCIM+ +LVNI +IIS HIIA VKHPR  RPFS
Sbjct: 28  IWLVLIKKKIMPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFS 87

Query: 147 HLIEKLCLKACPTSEQL 164
           +LIE+LCL+AC   E+L
Sbjct: 88  YLIEQLCLRACLMLEKL 104

[Close]
BLAST of MELO3C016069 vs. TrEMBL
Match: A0A0A0K4F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G327740 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-17
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 1 

Query: 1   MFYKGYIIEEEHYAMVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVA 60
           +FYK +I +EE+Y +V+ + V FG D IN  +GL+  E+   IFKN   +D++D LK + 
Sbjct: 101 LFYKSFIHDEENYTVVKQEHVYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTIT 160

Query: 61  WPRTKWDIMPTGKYQLFLQNLNTEAIIWL 90
           W +T+WD  PT KYQLF  NLNT A IWL
Sbjct: 161 WLKTEWDNKPTEKYQLFSHNLNTCASIWL 189

[Close]
BLAST of MELO3C016069 vs. TrEMBL
Match: W9QTD9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-10
Identity = 51/157 (32.48%), Postives = 71/157 (45.22%), Query Frame = 1 

Query: 2   FYKGYIIEEEHYAMVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNP-QERDLEDALKRVA 61
           FY   +   +    V+  KV F   AIN +FGLE    E+  F +   +  LE  L  VA
Sbjct: 34  FYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVVDEYVDFASEVTDEQLEVVLAEVA 93

Query: 62  WPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHL 121
                W I P G Y    + L   A IW  F+     P+ H  T++ + ++L+Y I+  +
Sbjct: 94  IEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGKTVAKDRVLLLYSILTGI 153

Query: 122 LVNIVEIISEHIIAW-VKHPRRTRPFSHLIEKLCLKA 157
            VNI EI  + I A      R    F  LI +L LKA
Sbjct: 154 SVNIEEITIKEIKACSAARKRGGLYFPSLITQLWLKA 190

[Close]
BLAST of MELO3C016069 vs. NCBI nr
Match: gi|700202971|gb|KGN58104.1| (hypothetical protein Csa_3G511970 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 5.7e-35
Identity = 81/166 (48.80%), Postives = 103/166 (62.05%), Query Frame = 1 

Query: 2   FYKGYIIEEEHYAMVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAW 61
           FYKGYI EE+ Y M++G+K                             +D+++ALK+V  
Sbjct: 35  FYKGYINEEQQYVMIKGQK-----------------------------QDVDEALKKVVC 94

Query: 62  PRTKWDIMPTGKYQL-----FLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCI 121
            +TKWD M  G YQ+     FL N NT+A +WLVFVK  I  TR DSTISM+ IML+YCI
Sbjct: 95  SKTKWDKMSIGTYQIRMGLIFLHNPNTDASVWLVFVKKKIMSTRPDSTISMDKIMLIYCI 154

Query: 122 MEHLLVNIVEIISEHIIAWVKHPRRTRPFSHLIEKLCLKACPTSEQ 163
           ME + VN+ EII +HI+AW+KHP   RPF HLIEKLCLKAC T ++
Sbjct: 155 MEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLTKKE 171

[Close]
BLAST of MELO3C016069 vs. NCBI nr
Match: gi|700199714|gb|KGN54872.1| (hypothetical protein Csa_4G569710 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-26
Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 1 

Query: 38  EIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIR 97
           EI H I KNP+ +DLE ALK+V WP T  DI PTGKYQL   NLNTEAIIWLVFVK  I 
Sbjct: 4   EIGHDILKNPRAQDLESALKKVVWPETMLDITPTGKYQLLPHNLNTEAIIWLVFVKKKIM 63

Query: 98  PTRHDSTISMEHIMLVYCIMEHLLVNI 125
           PTRHD+ ISME +MLVYCIM+ +LV +
Sbjct: 64  PTRHDNNISMERVMLVYCIMKEILVEV 90

[Close]
BLAST of MELO3C016069 vs. NCBI nr
Match: gi|700202594|gb|KGN57727.1| (hypothetical protein Csa_3G263250 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 6.1e-21
Identity = 53/77 (68.83%), Postives = 62/77 (80.52%), Query Frame = 1 

Query: 87  IWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIAWVKHPRRTRPFS 146
           IWLV +K  I PTRH STISME +MLVYCIM+ +LVNI +IIS HIIA VKHPR  RPFS
Sbjct: 28  IWLVLIKKKIMPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFS 87

Query: 147 HLIEKLCLKACPTSEQL 164
           +LIE+LCL+AC   E+L
Sbjct: 88  YLIEQLCLRACLMLEKL 104

[Close]
BLAST of MELO3C016069 vs. NCBI nr
Match: gi|700189302|gb|KGN44535.1| (hypothetical protein Csa_7G327740 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-17
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 1 

Query: 1   MFYKGYIIEEEHYAMVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVA 60
           +FYK +I +EE+Y +V+ + V FG D IN  +GL+  E+   IFKN   +D++D LK + 
Sbjct: 101 LFYKSFIHDEENYTVVKQEHVYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTIT 160

Query: 61  WPRTKWDIMPTGKYQLFLQNLNTEAIIWL 90
           W +T+WD  PT KYQLF  NLNT A IWL
Sbjct: 161 WLKTEWDNKPTEKYQLFSHNLNTCASIWL 189

[Close]
BLAST of MELO3C016069 vs. NCBI nr
Match: gi|703087370|ref|XP_010093253.1| (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 72.4 bits (176), Expect = 8.3e-10
Identity = 51/157 (32.48%), Postives = 71/157 (45.22%), Query Frame = 1 

Query: 2   FYKGYIIEEEHYAMVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNP-QERDLEDALKRVA 61
           FY   +   +    V+  KV F   AIN +FGLE    E+  F +   +  LE  L  VA
Sbjct: 34  FYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVVDEYVDFASEVTDEQLEVVLAEVA 93

Query: 62  WPRTKWDIMPTGKYQLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHL 121
                W I P G Y    + L   A IW  F+     P+ H  T++ + ++L+Y I+  +
Sbjct: 94  IEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGKTVAKDRVLLLYSILTGI 153

Query: 122 LVNIVEIISEHIIAW-VKHPRRTRPFSHLIEKLCLKA 157
            VNI EI  + I A      R    F  LI +L LKA
Sbjct: 154 SVNIEEITIKEIKACSAARKRGGLYFPSLITQLWLKA 190

The following BLAST results are available for this feature:
BLAST of MELO3C016069 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAY9_CUCSA4.0e-3548.80Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1[more]
A0A0A0L2P0_CUCSA5.8e-2667.82Uncharacterized protein OS=Cucumis sativus GN=Csa_4G569710 PE=4 SV=1[more]
A0A0A0LAN0_CUCSA4.3e-2168.83Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1[more]
A0A0A0K4F2_CUCSA1.7e-1749.44Uncharacterized protein OS=Cucumis sativus GN=Csa_7G327740 PE=4 SV=1[more]
W9QTD9_9ROSA5.8e-1032.48Uncharacterized protein OS=Morus notabilis GN=L484_022412 PE=4 SV=1[more]
BLAST of MELO3C016069 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202971|gb|KGN58104.1|5.7e-3548.80hypothetical protein Csa_3G511970 [Cucumis sativus][more]
gi|700199714|gb|KGN54872.1|8.3e-2667.82hypothetical protein Csa_4G569710 [Cucumis sativus][more]
gi|700202594|gb|KGN57727.1|6.1e-2168.83hypothetical protein Csa_3G263250 [Cucumis sativus][more]
gi|700189302|gb|KGN44535.1|2.4e-1749.44hypothetical protein Csa_7G327740 [Cucumis sativus][more]
gi|703087370|ref|XP_010093253.1|8.3e-1032.48hypothetical protein L484_022412 [Morus notabilis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016069T1MELO3C016069T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016069CSPI04G08400Wild cucumber (PI 183967)cpimeB312
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016069Cucumber (Gy14) v2cgybmeB271
MELO3C016069Cucumber (Chinese Long) v3cucmeB317
MELO3C016069Watermelon (97103) v2mewmbB464
MELO3C016069Melon (DHL92) v3.5.1memeB153
MELO3C016069Cucumber (Gy14) v1cgymeB455
MELO3C016069Cucurbita maxima (Rimu)cmameB306
MELO3C016069Cucurbita moschata (Rifu)cmomeB296
MELO3C016069Cucumber (Chinese Long) v2cumeB314
MELO3C016069Watermelon (Charleston Gray)mewcgB454
MELO3C016069Cucurbita pepo (Zucchini)cpemeB198
MELO3C016069Bottle gourd (USVL1VR-Ls)lsimeB270