MELO3C016063 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016063
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Sister chromatid cohesion 2
Location	chr7 : 18352489 .. 18355493 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGCCGCCCTCTGCTTTTGCTTCTGCTTCTTCCTCTGCCTCTACCTCCTCCAACCGCGGCATCGGCTTGTCTAATACTATACACTCTGAAGTTGCTCCTTGCTTGCCTTTGCCATCACTTCCGGTCTTCTTTGGCGCCTCTGACCCTCACCTTCGCCTCTTCGATCACCCCGACGCTACCTATGCTACTTCCACCGCTGATCTTCTCCCTCACTCTAAGAAGATCGCTGATCTGCTTCTTGCTACTGATGTCTCTTACTTGTGAGTTTCCCAATTTCTTTTTTCTCTATTTCGAACTTCATTTTTCTCCTAATTCTTCACTTCGGTTGACTCTATTTTGGTTCGCTCCTACTGTTTTGTGGATTTGGCGGTGTTACTATTTCTGCCTCCACGGAAATGCTTTCAGGAACTTCACATTTTTTTTTTTTTTTTGAAATCTCTACTTTTTGACCGTTGATTTAGGATTATTCTATCTCGTAGTTGTAATTCAGCAATGCAACTAGTCTTTCGCTTTTGGGTTTTAAATTATCCATTTTTGAAGTTAGAACTACTTGATTAATGCGAATAGCAGCATCTATAGCCTTCATTTTCAAAATTTAACTGTAGAATTATCAGTAGTAGCCGACAAATTTGGATTAGTGAAGGTATACGCGGCGGTTACTGCTTCGATTTTCATAGTATACTAGTTTATGTCATCTTTCAATCGTGGAAGTCTGTAGGCTACCAGACGTCCCAGCTAGCTACTCTCCGGAGATTTATCCCTCACTAAACTTAGTTACTGTGAACTGCTGGATCATCAATACGTAGTTGATATCTGTCGATTAACTAGAGTTGCATTACTGAATTATGCTGTACATTGTCTCCATATTTGACTTAGTGATTCCTCGTTCCTAAGGCCTTTAGGCGGCTGTTTTCCTTTTTGGCTGTCTAATATGGTTGAAAAATAAATTCCATGGATGCATCGTTTGGGTTTTGCTCGTATTCTAGCCTCTATGTGATGTTTTTCGTTCAAGTTTTTGCTAATTATTCTATTCAAGACAAACTTGTATTCGGATGCTTTTATTTTCTCCATTTAAGTTTATGGTCTCTATTGTCTTCTAATTCTCCTATGTTTTCTGGCATTGTGTATTTTTGAGCATTAGTCTCTTTTCATTTTATCCATGAAAAGTGTTGTTTTCTTTTCAAGAGAAGGGGAAAAAACAGTTGATTTCGCTTCCTATAAACTAAAAGGAGAGTTACATGCGATAGATTTCTTTCCATGTTCATATTGATATTATTATTCACTTTGGTGCCATCAACAGAAATCTCAGAGAAGATGCTCAGGTTCTTCAAGAAGGGTCTGTGGAGCCTTTTGAACTCTATGAGGAAGTTCTACGTCATGATGGTGATGCCTTCAGTTATACTGCTCCAGGTAAACGAAGTCTTGAAATGTTTTTCTTCCTTATTTAATGGAAATATCAATGACTTAATGTAACTATATCTTGACATATTTTGAAATGTAAATTGAGTGACACAAACCATCTTATTTTGTTTCTCCAATGTAATGAAAAAGTTTTTGAATCTCCTATTATGAGCAAATTTGGCGTGATATTGTCACTTTTTGTGATATATAAATAGCTCTATCAGTCAAGTGTATGCTTGTTTGGAGTTGGGAAGAATTGTCCATGCTTTGTGGAATGTTTATGTTTGACGTGGGACCTAGGAGTTCCAAATTTCGAAGACAAGTTATCTTCTTTTAATTGTTTTTATTATTGTACACCATTCTGCTTCTTGCTCCTGATCAAGCTCTAGAAATATTCTATATAACTATAGTCTTTTGATGTTTAAATTATTGGAAGGTTTTTCTTTGTAGGGGGTTTCTCTCTATCTAGCTCCTAGGTTGTTCATAGTATTTATTTGGAATACATTAGCATTTTTTCCCCCTCCAAAAACGGGTTGAGGTGTACAAGGAATTCAAAAGCTTCAGATCCGATGAGTTCCCTTTTATTTCTTAAACAATAAAATTACTGTTTGATTGTGCATCATGTTCTGGCCCCATTGGTAATTTTAAGGGGCGGGAAATTGTAAAAATATAATATTTAGGAAAAAGGGTTACGATAAACCATGAAAATAGGAAAGTAAGAATGAAGATGATTTTAATCTTTTCATTTACCTTTTTGTTTGATTTTATTTTACTTGGATGACTTTTATTCCTGAAGTCAATCATTTATTTTTGAACTTACTGTCTATTGTGCTGTTCAAGTTTCTCAGGTCCTATTATGGAGCATGTCTCCAGCAGTACAGTACCTGATAGGAAAGTTTTTGAGCAAAGACTACATATTAGAAATCAAGTTGAAGGAGACTCTAGAACAACTCAAAGTCAAAAGATGGAACCTGAAACTATGCCTACTAATGTATGCAAGCATTAGGGTTTCCAGTCTCTTTATTTTATTACTTGTGCTTTGCTAATCCTGGCTATAAAAAAATTACAGGATACGCCAATCTCATCTTCTAGAAAAGTAAAAACTAAGAAGAAAGTCCGAGATGAAACTTCTTCTGGTAGAACTGGCTCTTCTGAGCTTCAAGGTTGTTCTACAAACGTTTCTTGAGCTAGTATATGGATGCTGTTCTGTATTTCACCTCACAAGTTTTGTTTTCATCTTTCATGGACTAAATATTACTTTGAATATTGTAGACAACACCCTTGCAAAATCTTGTGAGTTCTTAGAGGACTTTTGTGGTAGAGCTGAAATTGTCGATGATGATCGTGATGAATCAGAGTGGCTGGCTCTTCCTCTTACTGATCTTCGAATGCTTGTCAATGAAATAATGTCCATACGTTCGAAGAAACTTCTTCATTTGGTTCCTCTAGATAAGCTGACGAGGCTGTTGAAGGTTTTAGATAATCAGATTCATAGAGCAGAAGGATTGTCTGTTGAAGAATGTGAACATGTGAGTTACCTTTTTTTAAATGGTTTTGTTATTCATATTCTTAATTGGTGCTCGTTCCCGTTTTCTTGA

mRNA sequence

ATGAGTTTGCCGCCCTCTGCTTTTGCTTCTGCTTCTTCCTCTGCCTCTACCTCCTCCAACCGCGGCATCGGCTTGTCTAATACTATACACTCTGAAGTTGCTCCTTGCTTGCCTTTGCCATCACTTCCGGTCTTCTTTGGCGCCTCTGACCCTCACCTTCGCCTCTTCGATCACCCCGACGCTACCTATGCTACTTCCACCGCTGATCTTCTCCCTCACTCTAAGAAGATCGCTGATCTGCTTCTTGCTACTGATGTCTCTTACTTAAATCTCAGAGAAGATGCTCAGGTTCTTCAAGAAGGGTCTGTGGAGCCTTTTGAACTCTATGAGGAAGTTCTACGTCATGATGGTGATGCCTTCAGTTATACTGCTCCAGGTCCTATTATGGAGCATGTCTCCAGCAGTACAGTACCTGATAGGAAAGTTTTTGAGCAAAGACTACATATTAGAAATCAAGTTGAAGGAGACTCTAGAACAACTCAAAGTCAAAAGATGGAACCTGAAACTATGCCTACTAATGATACGCCAATCTCATCTTCTAGAAAAGTAAAAACTAAGAAGAAAGTCCGAGATGAAACTTCTTCTGGTAGAACTGGCTCTTCTGAGCTTCAAGACAACACCCTTGCAAAATCTTGTGAGTTCTTAGAGGACTTTTGTGGTAGAGCTGAAATTGTCGATGATGATCGTGATGAATCAGAGTGGCTGGCTCTTCCTCTTACTGATCTTCGAATGCTTGTCAATGAAATAATGTCCATACGTTCGAAGAAACTTCTTCATTTGGTTCCTCTAGATAAGCTGACGAGGCTGTTGAAGGTTTTAGATAATCAGATTCATAGAGCAGAAGGATTGTCTGTTGAAGAATGTGAACATGTGAGTTACCTTTTTTTAAATGGTTTTGTTATTCATATTCTTAATTGGTGCTCGTTCCCGTTTTCTTGA

Coding sequence (CDS)

ATGAGTTTGCCGCCCTCTGCTTTTGCTTCTGCTTCTTCCTCTGCCTCTACCTCCTCCAACCGCGGCATCGGCTTGTCTAATACTATACACTCTGAAGTTGCTCCTTGCTTGCCTTTGCCATCACTTCCGGTCTTCTTTGGCGCCTCTGACCCTCACCTTCGCCTCTTCGATCACCCCGACGCTACCTATGCTACTTCCACCGCTGATCTTCTCCCTCACTCTAAGAAGATCGCTGATCTGCTTCTTGCTACTGATGTCTCTTACTTAAATCTCAGAGAAGATGCTCAGGTTCTTCAAGAAGGGTCTGTGGAGCCTTTTGAACTCTATGAGGAAGTTCTACGTCATGATGGTGATGCCTTCAGTTATACTGCTCCAGGTCCTATTATGGAGCATGTCTCCAGCAGTACAGTACCTGATAGGAAAGTTTTTGAGCAAAGACTACATATTAGAAATCAAGTTGAAGGAGACTCTAGAACAACTCAAAGTCAAAAGATGGAACCTGAAACTATGCCTACTAATGATACGCCAATCTCATCTTCTAGAAAAGTAAAAACTAAGAAGAAAGTCCGAGATGAAACTTCTTCTGGTAGAACTGGCTCTTCTGAGCTTCAAGACAACACCCTTGCAAAATCTTGTGAGTTCTTAGAGGACTTTTGTGGTAGAGCTGAAATTGTCGATGATGATCGTGATGAATCAGAGTGGCTGGCTCTTCCTCTTACTGATCTTCGAATGCTTGTCAATGAAATAATGTCCATACGTTCGAAGAAACTTCTTCATTTGGTTCCTCTAGATAAGCTGACGAGGCTGTTGAAGGTTTTAGATAATCAGATTCATAGAGCAGAAGGATTGTCTGTTGAAGAATGTGAACATGTGAGTTACCTTTTTTTAAATGGTTTTGTTATTCATATTCTTAATTGGTGCTCGTTCCCGTTTTCTTGA

Protein sequence

MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPDATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAFSYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSSRKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLTDLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEHVSYLFLNGFVIHILNWCSFPFS*

Homology

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BLAST of MELO3C016063 vs. TrEMBL
Match: A0A0A0KVP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092970 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 1.9e-147
Identity = 271/291 (93.13%), Postives = 277/291 (95.19%), Query Frame = 1


Query: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60
           MSLP SA  SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRL DHPD
Sbjct: 1   MSLPLSA--SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLSDHPD 60

Query: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120
           ATYATST+DLLPHS+KIADLLLATDVSYLNLREDA+VLQEG VEPFELYEEVLRHDGDAF
Sbjct: 61  ATYATSTSDLLPHSRKIADLLLATDVSYLNLREDAKVLQEGPVEPFELYEEVLRHDGDAF 120

Query: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180
           SYTAPGPIM+HVSSST PDRKVFEQRL IRNQVEGDSRTTQS K EPETMPTNDT ISSS
Sbjct: 121 SYTAPGPIMDHVSSSTAPDRKVFEQRLPIRNQVEGDSRTTQSHKTEPETMPTNDTQISSS 180

Query: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240
           RKVKTKKK RDETSSGRT SSELQDNTLA +CEFLEDFCGRAEIVDDDRDESEWLALPLT
Sbjct: 181 RKVKTKKKGRDETSSGRTDSSELQDNTLANTCEFLEDFCGRAEIVDDDRDESEWLALPLT 240

Query: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEHV 292
           DLRMLVNEIMSIRSKKLLHLVPLD LTRLLKVLDNQIHRAEGLSVEECEH+
Sbjct: 241 DLRMLVNEIMSIRSKKLLHLVPLDMLTRLLKVLDNQIHRAEGLSVEECEHI 289

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BLAST of MELO3C016063 vs. TrEMBL
Match: W9QQY4_9ROSA (Nipped-B-like protein OS=Morus notabilis GN=L484_021011 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.6e-75
Identity = 154/285 (54.04%), Postives = 199/285 (69.82%), Query Frame = 1


Query: 9   ASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPDATYATSTA 68
           +S+ S  +  ++RGIGLSNTIHSEVA CLPLPSLPVF GASDP LRLFD     Y  S  
Sbjct: 10  SSSGSGPALWNHRGIGLSNTIHSEVASCLPLPSLPVFCGASDPELRLFDDSSRNYLWSLN 69

Query: 69  --DLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAFSYTAPG 128
             ++L  S +IADLL  TDVSYLNLRE  Q +  G +EP +L++EVLR + +AF+   PG
Sbjct: 70  RNEILNQSGRIADLLRQTDVSYLNLREAPQEVSYGYLEPLDLHDEVLRFNSEAFNVNGPG 129

Query: 129 PIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSSRKVKTK 188
            I E +S  TVP++K FE  + I +    D   T +       +P NDT  SSSRK + K
Sbjct: 130 HIKEQISVGTVPEKKPFEPSIPITSHSHKDYGATHNHHFN--NVPANDTSTSSSRKSRAK 189

Query: 189 KKVRDETSSG-RTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLTDLRML 248
           KKV D  S+      +ELQD  +   CE +E+FC RAEI +DDRDE+EWL++PL+DLR+L
Sbjct: 190 KKVSDNISTAVLPDPTELQDAAIESFCELVENFCSRAEIDNDDRDEAEWLSIPLSDLRIL 249

Query: 249 VNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           VNEI+SIR+K+LLHL+P+D L R+L+VLD+QIHRAEGLS+ +CEH
Sbjct: 250 VNEIISIRAKRLLHLLPVDILVRVLRVLDHQIHRAEGLSINDCEH 292

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BLAST of MELO3C016063 vs. TrEMBL
Match: A0A061EF60_THECC (Pearli, putative isoform 3 OS=Theobroma cacao GN=TCM_018720 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 7.7e-72
Identity = 153/275 (55.64%), Postives = 194/275 (70.55%), Query Frame = 1


Query: 19  SNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD--ATYATSTADLLPHSKK 78
           ++RGIGLSNTIHSEVA CLPLPSLPVF GASDP L LFD P   A+ + +  +++  S +
Sbjct: 22  AHRGIGLSNTIHSEVAQCLPLPSLPVFCGASDPELLLFDDPTGGASRSLNRPEIIAQSSR 81

Query: 79  IADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAFSYTAPGPIMEHVSSST 138
           IADLL  TDVSYLNLR++A       VEP EL+ +VL+++  AF Y  PG + E VS   
Sbjct: 82  IADLLRETDVSYLNLRDEASSATYDYVEPLELHVQVLQYNPAAFEYVTPGLVKEQVSGGA 141

Query: 139 VPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSSRKVKTKKKVRDET-SS 198
           V +RK  E      +Q + D  +T +Q+ +   +  ND P SSSRK K KKK  ++  SS
Sbjct: 142 VFERKPPESSFPHISQFQRDISSTYNQQTD---VIANDAPKSSSRKPKGKKKAANDVGSS 201

Query: 199 GRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLTDLRMLVNEIMSIRSK 258
            R   +ELQD  +    E LEDFCGRA+I  DDRDE+EWL+LP+ D+RMLVNEIMSIR+K
Sbjct: 202 VRPDPTELQDAIIGHFREMLEDFCGRAQIPSDDRDETEWLSLPVNDVRMLVNEIMSIRTK 261

Query: 259 KLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           +LLHLVP+D L +LL+VLD+QIHRAEGLSV+ECEH
Sbjct: 262 RLLHLVPVDILVKLLRVLDHQIHRAEGLSVDECEH 293

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BLAST of MELO3C016063 vs. TrEMBL
Match: A0A061EG61_THECC (Pearli, putative isoform 1 OS=Theobroma cacao GN=TCM_018720 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 7.7e-72
Identity = 153/275 (55.64%), Postives = 194/275 (70.55%), Query Frame = 1


Query: 19  SNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD--ATYATSTADLLPHSKK 78
           ++RGIGLSNTIHSEVA CLPLPSLPVF GASDP L LFD P   A+ + +  +++  S +
Sbjct: 22  AHRGIGLSNTIHSEVAQCLPLPSLPVFCGASDPELLLFDDPTGGASRSLNRPEIIAQSSR 81

Query: 79  IADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAFSYTAPGPIMEHVSSST 138
           IADLL  TDVSYLNLR++A       VEP EL+ +VL+++  AF Y  PG + E VS   
Sbjct: 82  IADLLRETDVSYLNLRDEASSATYDYVEPLELHVQVLQYNPAAFEYVTPGLVKEQVSGGA 141

Query: 139 VPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSSRKVKTKKKVRDET-SS 198
           V +RK  E      +Q + D  +T +Q+ +   +  ND P SSSRK K KKK  ++  SS
Sbjct: 142 VFERKPPESSFPHISQFQRDISSTYNQQTD---VIANDAPKSSSRKPKGKKKAANDVGSS 201

Query: 199 GRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLTDLRMLVNEIMSIRSK 258
            R   +ELQD  +    E LEDFCGRA+I  DDRDE+EWL+LP+ D+RMLVNEIMSIR+K
Sbjct: 202 VRPDPTELQDAIIGHFREMLEDFCGRAQIPSDDRDETEWLSLPVNDVRMLVNEIMSIRTK 261

Query: 259 KLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           +LLHLVP+D L +LL+VLD+QIHRAEGLSV+ECEH
Sbjct: 262 RLLHLVPVDILVKLLRVLDHQIHRAEGLSVDECEH 293

[Close]

BLAST of MELO3C016063 vs. TrEMBL
Match: A0A061EMS7_THECC (Pearli, putative isoform 2 OS=Theobroma cacao GN=TCM_018720 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 7.7e-72
Identity = 153/275 (55.64%), Postives = 194/275 (70.55%), Query Frame = 1


Query: 19  SNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD--ATYATSTADLLPHSKK 78
           ++RGIGLSNTIHSEVA CLPLPSLPVF GASDP L LFD P   A+ + +  +++  S +
Sbjct: 22  AHRGIGLSNTIHSEVAQCLPLPSLPVFCGASDPELLLFDDPTGGASRSLNRPEIIAQSSR 81

Query: 79  IADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAFSYTAPGPIMEHVSSST 138
           IADLL  TDVSYLNLR++A       VEP EL+ +VL+++  AF Y  PG + E VS   
Sbjct: 82  IADLLRETDVSYLNLRDEASSATYDYVEPLELHVQVLQYNPAAFEYVTPGLVKEQVSGGA 141

Query: 139 VPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSSRKVKTKKKVRDET-SS 198
           V +RK  E      +Q + D  +T +Q+ +   +  ND P SSSRK K KKK  ++  SS
Sbjct: 142 VFERKPPESSFPHISQFQRDISSTYNQQTD---VIANDAPKSSSRKPKGKKKAANDVGSS 201

Query: 199 GRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLTDLRMLVNEIMSIRSK 258
            R   +ELQD  +    E LEDFCGRA+I  DDRDE+EWL+LP+ D+RMLVNEIMSIR+K
Sbjct: 202 VRPDPTELQDAIIGHFREMLEDFCGRAQIPSDDRDETEWLSLPVNDVRMLVNEIMSIRTK 261

Query: 259 KLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           +LLHLVP+D L +LL+VLD+QIHRAEGLSV+ECEH
Sbjct: 262 RLLHLVPVDILVKLLRVLDHQIHRAEGLSVDECEH 293

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BLAST of MELO3C016063 vs. TAIR10
Match: AT5G15540.1 (AT5G15540.1 PHD finger family protein)

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-58
Identity = 132/319 (41.38%), Postives = 192/319 (60.19%), Query Frame = 1


Query: 5   PSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDP-HLRLFDHP---D 64
           PS+    SSS  T  + GIGL+NT+ SEV P LPLPSLP+F GA++P   +LFD      
Sbjct: 4   PSSSGLGSSSGLT--HFGIGLANTVQSEVTPYLPLPSLPIFCGAAEPGEFKLFDEVGQGS 63

Query: 65  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 124
              +   +++L  S +IA++L  TDVSYL+LR +A+     S E F+LY+ VLR +  AF
Sbjct: 64  GYRSLDRSEILAQSSRIANMLHETDVSYLDLRNEARAPDCNSGEHFQLYDLVLRCNPGAF 123

Query: 125 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEP------------- 184
            Y  PGP  + + ++  P + + E  + ++ Q + D+   +S + EP             
Sbjct: 124 EYVTPGPTCDPLFTNEGPQKIISEPSVPVKMQRQTDTHLARSIEPEPVKRVLRPNHVEDH 183

Query: 185 ----ETMPTNDTP-----------------ISSSRKVKTKKKVRDETSSGRTGSSELQDN 244
               ET+ TN +P                 +S+S+K K KKK +D+ SS +   S LQ++
Sbjct: 184 SWQHETL-TNQSPKDVTAYDSRPETITMNELSASKKPKGKKKRKDDLSSVQPDPSVLQES 243

Query: 245 TLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLTDLRMLVNEIMSIRSKKLLHLVPLDKL 286
            +   CE LEDFCGRAE+  DDRDE+EW ++P+ ++R+L+NE+M+IRSK LLH+VP+D L
Sbjct: 244 IVQNFCEMLEDFCGRAEVPGDDRDEAEWSSVPVDEVRVLINELMTIRSKMLLHMVPVDIL 303

[Close]

BLAST of MELO3C016063 vs. NCBI nr
Match: gi|659101554|ref|XP_008451668.1| (PREDICTED: nipped-B-like protein isoform X1 [Cucumis melo])

HSP 1 Score: 575.1 bits (1481), Expect = 7.5e-161
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 1


Query: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60
           MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD
Sbjct: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60

Query: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120
           ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF
Sbjct: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120

Query: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180
           SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS
Sbjct: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180

Query: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240
           RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT
Sbjct: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240

Query: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH
Sbjct: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 290

[Close]

BLAST of MELO3C016063 vs. NCBI nr
Match: gi|659101556|ref|XP_008451669.1| (PREDICTED: nipped-B-like protein isoform X2 [Cucumis melo])

HSP 1 Score: 575.1 bits (1481), Expect = 7.5e-161
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 1


Query: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60
           MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD
Sbjct: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60

Query: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120
           ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF
Sbjct: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120

Query: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180
           SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS
Sbjct: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180

Query: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240
           RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT
Sbjct: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240

Query: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH
Sbjct: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 290

[Close]

BLAST of MELO3C016063 vs. NCBI nr
Match: gi|700198475|gb|KGN53633.1| (hypothetical protein Csa_4G092970 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 2.8e-147
Identity = 271/291 (93.13%), Postives = 277/291 (95.19%), Query Frame = 1


Query: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60
           MSLP SA  SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRL DHPD
Sbjct: 1   MSLPLSA--SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLSDHPD 60

Query: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120
           ATYATST+DLLPHS+KIADLLLATDVSYLNLREDA+VLQEG VEPFELYEEVLRHDGDAF
Sbjct: 61  ATYATSTSDLLPHSRKIADLLLATDVSYLNLREDAKVLQEGPVEPFELYEEVLRHDGDAF 120

Query: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180
           SYTAPGPIM+HVSSST PDRKVFEQRL IRNQVEGDSRTTQS K EPETMPTNDT ISSS
Sbjct: 121 SYTAPGPIMDHVSSSTAPDRKVFEQRLPIRNQVEGDSRTTQSHKTEPETMPTNDTQISSS 180

Query: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240
           RKVKTKKK RDETSSGRT SSELQDNTLA +CEFLEDFCGRAEIVDDDRDESEWLALPLT
Sbjct: 181 RKVKTKKKGRDETSSGRTDSSELQDNTLANTCEFLEDFCGRAEIVDDDRDESEWLALPLT 240

Query: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEHV 292
           DLRMLVNEIMSIRSKKLLHLVPLD LTRLLKVLDNQIHRAEGLSVEECEH+
Sbjct: 241 DLRMLVNEIMSIRSKKLLHLVPLDMLTRLLKVLDNQIHRAEGLSVEECEHI 289

[Close]

BLAST of MELO3C016063 vs. NCBI nr
Match: gi|778691738|ref|XP_011653342.1| (PREDICTED: nipped-B-like protein isoform X2 [Cucumis sativus])

HSP 1 Score: 528.9 bits (1361), Expect = 6.2e-147
Identity = 271/290 (93.45%), Postives = 276/290 (95.17%), Query Frame = 1


Query: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60
           MSLP SA  SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRL DHPD
Sbjct: 1   MSLPLSA--SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLSDHPD 60

Query: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120
           ATYATST+DLLPHS+KIADLLLATDVSYLNLREDA+VLQEG VEPFELYEEVLRHDGDAF
Sbjct: 61  ATYATSTSDLLPHSRKIADLLLATDVSYLNLREDAKVLQEGPVEPFELYEEVLRHDGDAF 120

Query: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180
           SYTAPGPIM+HVSSST PDRKVFEQRL IRNQVEGDSRTTQS K EPETMPTNDT ISSS
Sbjct: 121 SYTAPGPIMDHVSSSTAPDRKVFEQRLPIRNQVEGDSRTTQSHKTEPETMPTNDTQISSS 180

Query: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240
           RKVKTKKK RDETSSGRT SSELQDNTLA +CEFLEDFCGRAEIVDDDRDESEWLALPLT
Sbjct: 181 RKVKTKKKGRDETSSGRTDSSELQDNTLANTCEFLEDFCGRAEIVDDDRDESEWLALPLT 240

Query: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           DLRMLVNEIMSIRSKKLLHLVPLD LTRLLKVLDNQIHRAEGLSVEECEH
Sbjct: 241 DLRMLVNEIMSIRSKKLLHLVPLDMLTRLLKVLDNQIHRAEGLSVEECEH 288

[Close]

BLAST of MELO3C016063 vs. NCBI nr
Match: gi|778691735|ref|XP_011653341.1| (PREDICTED: nipped-B-like protein isoform X1 [Cucumis sativus])

HSP 1 Score: 528.9 bits (1361), Expect = 6.2e-147
Identity = 271/290 (93.45%), Postives = 276/290 (95.17%), Query Frame = 1


Query: 1   MSLPPSAFASASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLFDHPD 60
           MSLP SA  SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRL DHPD
Sbjct: 1   MSLPLSA--SASSSASTSSNRGIGLSNTIHSEVAPCLPLPSLPVFFGASDPHLRLSDHPD 60

Query: 61  ATYATSTADLLPHSKKIADLLLATDVSYLNLREDAQVLQEGSVEPFELYEEVLRHDGDAF 120
           ATYATST+DLLPHS+KIADLLLATDVSYLNLREDA+VLQEG VEPFELYEEVLRHDGDAF
Sbjct: 61  ATYATSTSDLLPHSRKIADLLLATDVSYLNLREDAKVLQEGPVEPFELYEEVLRHDGDAF 120

Query: 121 SYTAPGPIMEHVSSSTVPDRKVFEQRLHIRNQVEGDSRTTQSQKMEPETMPTNDTPISSS 180
           SYTAPGPIM+HVSSST PDRKVFEQRL IRNQVEGDSRTTQS K EPETMPTNDT ISSS
Sbjct: 121 SYTAPGPIMDHVSSSTAPDRKVFEQRLPIRNQVEGDSRTTQSHKTEPETMPTNDTQISSS 180

Query: 181 RKVKTKKKVRDETSSGRTGSSELQDNTLAKSCEFLEDFCGRAEIVDDDRDESEWLALPLT 240
           RKVKTKKK RDETSSGRT SSELQDNTLA +CEFLEDFCGRAEIVDDDRDESEWLALPLT
Sbjct: 181 RKVKTKKKGRDETSSGRTDSSELQDNTLANTCEFLEDFCGRAEIVDDDRDESEWLALPLT 240

Query: 241 DLRMLVNEIMSIRSKKLLHLVPLDKLTRLLKVLDNQIHRAEGLSVEECEH 291
           DLRMLVNEIMSIRSKKLLHLVPLD LTRLLKVLDNQIHRAEGLSVEECEH
Sbjct: 241 DLRMLVNEIMSIRSKKLLHLVPLDMLTRLLKVLDNQIHRAEGLSVEECEH 288

The following BLAST results are available for this feature:

BLAST of MELO3C016063 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVP6_CUCSA	1.9e-147	93.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092970 PE=4 SV=1	[more]
W9QQY4_9ROSA	2.6e-75	54.04	Nipped-B-like protein OS=Morus notabilis GN=L484_021011 PE=4 SV=1	[more]
A0A061EF60_THECC	7.7e-72	55.64	Pearli, putative isoform 3 OS=Theobroma cacao GN=TCM_018720 PE=4 SV=1	[more]
A0A061EG61_THECC	7.7e-72	55.64	Pearli, putative isoform 1 OS=Theobroma cacao GN=TCM_018720 PE=4 SV=1	[more]
A0A061EMS7_THECC	7.7e-72	55.64	Pearli, putative isoform 2 OS=Theobroma cacao GN=TCM_018720 PE=4 SV=1	[more]

BLAST of MELO3C016063 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15540.1	2.5e-58	41.38	PHD finger family protein	[more]

BLAST of MELO3C016063 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101554\|ref\|XP_008451668.1\|	7.5e-161	100.00	PREDICTED: nipped-B-like protein isoform X1 [Cucumis melo]	[more]
gi\|659101556\|ref\|XP_008451669.1\|	7.5e-161	100.00	PREDICTED: nipped-B-like protein isoform X2 [Cucumis melo]	[more]
gi\|700198475\|gb\|KGN53633.1\|	2.8e-147	93.13	hypothetical protein Csa_4G092970 [Cucumis sativus]	[more]
gi\|778691738\|ref\|XP_011653342.1\|	6.2e-147	93.45	PREDICTED: nipped-B-like protein isoform X2 [Cucumis sativus]	[more]
gi\|778691735\|ref\|XP_011653341.1\|	6.2e-147	93.45	PREDICTED: nipped-B-like protein isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Molecular Function**
Term	Definition
GO:0003682	chromatin binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007064	mitotic sister chromatid cohesion
GO:0010468	regulation of gene expression

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0044699	single-organism process
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003682	chromatin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016063T1	MELO3C016063T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 263..283 scor
None	No IPR available	PANTHER	PTHR21704:SF18	NIPPED-B-LIKE PROTEIN	coord: 10..290 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C016063	Csa4G092970	Cucumber (Chinese Long) v2	cumeB310
MELO3C016063	ClCG07G007370	Watermelon (Charleston Gray)	mewcgB499
MELO3C016063	CSPI04G08500	Wild cucumber (PI 183967)	cpimeB306
MELO3C016063	Cucsa.273180	Cucumber (Gy14) v1	cgymeB455

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C016063	Cucumber (Chinese Long) v3	cucmeB317
MELO3C016063	Watermelon (97103) v2	mewmbB464
MELO3C016063	Melon (DHL92) v3.5.1	memeB153
MELO3C016063	Cucurbita maxima (Rimu)	cmameB306
MELO3C016063	Cucurbita moschata (Rifu)	cmomeB296
MELO3C016063	Wild cucumber (PI 183967)	cpimeB312
MELO3C016063	Cucumber (Chinese Long) v2	cumeB314
MELO3C016063	Watermelon (Charleston Gray)	mewcgB454
MELO3C016063	Cucurbita pepo (Zucchini)	cpemeB198
MELO3C016063	Bottle gourd (USVL1VR-Ls)	lsimeB270
MELO3C016063	Cucumber (Gy14) v2	cgybmeB271