MELO3C016057.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C016057.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr01 : 32916009 .. 32916347 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCCATTATCAAATCTTTAATTTCCATAGCTCTTCTGGCTCTTCTTTTGCTCTCTCGATCTCGATCCACTCTTGCTGTCGATCACGACATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

mRNA sequence

ATGCCTCCCATTATCAAATCTTTAATTTCCATAGCTCTTCTGGCTCTTCTTTTGCTCTCTCGATCTCGATCCACTCTTGCTGTCGATCACGACATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

Coding sequence (CDS)

ATGCCTCCCATTATCAAATCTTTAATTTCCATAGCTCTTCTGGCTCTTCTTTTGCTCTCTCGATCTCGATCCACTCTTGCTGTCGATCACGACATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

Protein sequence

MPPIIKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMELHKQVVENENGYQYSFEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLMGSE
Homology
[Close]
BLAST of MELO3C016057.2 vs. NCBI nr
Match: KGN44887.1 (hypothetical protein Csa_7G394070 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 9.6e-30
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 1  MPPIIKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMELHKQVVENENGYQYS 60
          MPP IKSLIS+ALLALLLLSR  ST AV+H+MAPNSPIGMFQM E ++QVVEN+NGY+YS
Sbjct: 1  MPPFIKSLISVALLALLLLSRFPSTSAVNHNMAPNSPIGMFQMTE-YQQVVENKNGYRYS 60

Query: 61 FEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDI 96
          FEQK+VKKRARRS K+AEGPSPSMANR+RMT F I
Sbjct: 61 FEQKIVKKRARRSKKEAEGPSPSMANRSRMTCFII 94

[Close]
BLAST of MELO3C016057.2 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17
Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 0 

Query: 5   IKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMF-----QMMELHKQVVENENGYQY 64
           IKSLISIALLALLLLS      A DH +AP+    +F     Q  E H QV EN  GYQY
Sbjct: 93  IKSLISIALLALLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERH-QVAENGIGYQY 152

Query: 65  SFEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           SFEQK +++RARR+V++AEGPSPS AN ++ + F + SLLCLC VFGL +
Sbjct: 153 SFEQK-IRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCTVFGLFL 200

[Close]
BLAST of MELO3C016057.2 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 98.2 bits (243), Expect = 1.9e-17
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0 

Query: 5   IKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMEL----HKQVVENENGYQYS 64
           IKSLISIALLALLLL       A DH +AP+   G+F++  L      QV EN  G QYS
Sbjct: 66  IKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQYS 125

Query: 65  FEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLM 110
           FEQK +++RARR+V++AEGPSPS AN +R + F + SLLCLC VFGL +
Sbjct: 126 FEQK-IRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCTVFGLFL 173

[Close]
BLAST of MELO3C016057.2 vs. TrEMBL
Match: tr|A0A0A0K934|A0A0A0K934_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.3e-30
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 1  MPPIIKSLISIALLALLLLSRSRSTLAVDHDMAPNSPIGMFQMMELHKQVVENENGYQYS 60
          MPP IKSLIS+ALLALLLLSR  ST AV+H+MAPNSPIGMFQM E ++QVVEN+NGY+YS
Sbjct: 1  MPPFIKSLISVALLALLLLSRFPSTSAVNHNMAPNSPIGMFQMTE-YQQVVENKNGYRYS 60

Query: 61 FEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDI 96
          FEQK+VKKRARRS K+AEGPSPSMANR+RMT F I
Sbjct: 61 FEQKIVKKRARRSKKEAEGPSPSMANRSRMTCFII 94

The following BLAST results are available for this feature:
BLAST of MELO3C016057.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44887.19.6e-3080.00hypothetical protein Csa_7G394070 [Cucumis sativus][more]
XP_022954099.11.1e-1757.27uncharacterized protein LOC111456466 [Cucurbita moschata][more]
XP_022992473.11.9e-1755.96uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima][more]
BLAST of MELO3C016057.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C016057.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C016057.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K934|A0A0A0K934_CUCSA6.3e-3080.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394070 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016057.2.1MELO3C016057.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016057.2Csa7G394070Cucumber (Chinese Long) v2cumedB511
MELO3C016057.2CSPI07G17030Wild cucumber (PI 183967)cpimedB525
MELO3C016057.2Lsi02G023600Bottle gourd (USVL1VR-Ls)lsimedB201
MELO3C016057.2CsGy7G015470Cucumber (Gy14) v2cgybmedB467
MELO3C016057.2BhiUN245G39Wax gourdmedwgoB205
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016057.2Cucumber (Chinese Long) v3cucmedB538
MELO3C016057.2Watermelon (97103) v2medwmbB194
MELO3C016057.2Cucumber (Gy14) v1cgymedB601
MELO3C016057.2Watermelon (Charleston Gray)medwcgB155
MELO3C016057.2Watermelon (97103) v1medwmB181
MELO3C016057.2Silver-seed gourdcarmedB0112
MELO3C016057.2Silver-seed gourdcarmedB0859