MELO3C016000.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAACTTGGTAGACACAGAGCTCTCAGCATACGGACCTCCGAAGGAAATTGAGAATTGGAAGATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGTAAACTTTACGAATAATTTCTCAAACTATGATTCATTTTCTTTAATTTCTTCCTCTGAATTTCCTGCCCCTGTTCATCTTCAGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGTAATCTGAAAATCTATCTTATCGATTGATTTTTCTATTTCACTTTATCTTCTACACTTATTTTGTTTTCTCTCTTACAGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGTACCATACACTTGCTATTTAGCTTTGATTTACTTTTATTTGATTGAAATTGAGATTGTGGAGCTGTGGCGTCTGTCCAATGTGAAATCGTGTCTTTGTGATCTATTTTGCAGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGTAATGGTGACTGTCTTAGTATTTTGGCCTTTATAGATTGTTGAGCTGTGTTTGTGGCTGATTTTTTGCTTGGTTTTGTTCTGGTGGAAGAAATAGCTAAAGAATTTGGGTTGTAGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGGTTAGTCACACTCATGAAATGATTCATTTTCACATTTATCATTTGTTCGAATGTATCCACTGTGAAGGTTGCCTAGCTGTATTCCCAGAACTTGACCTCCCTTAGTTCATCGTGCATTAGATGGGTAACCCAAAAATGCCTCCCTCTTTTCGAGTGAATAATACCTCAAGAAAAGATGAGATTTCTGGTGACAGACAAATATAAAGGGTGTGGTAGAATGATTATACTTCAAATCATTCCCATCTAAAGCCATATCATTGGAAAGGCTCTGATTCTATTGAATTCTGTGTTTATCTTAGAACCTCTTCGGGTTACCTACTAATATATCATATACCAGTTATGGTTAATTAGATAATCATGGGCTCCACGTCAAAACCAAATTACAGTAAGAGAAGTAATTCATGTATGTTATAAATATTGCGAGGTATAGTCATTCATCTAATATGGGTACACAACATGTATCTCAAGATGGTGTCTCTTTGAGTTGACCATTGTTGGGTCAGATTCATATTATTGGGTTGAATCCATCTCCAAAACCAATGGTAGTCGAAGGAGTAACTCATATATCATGTAAAGATCATGAAGTCTCTTTTATCTTTTCGATGTGGGATACATAACATGATAAGTGTTTGGCTTTGTATTATACTTACATCCCAATTTTGGTATGAGTCTCATCTTTTCAGTTACTTTCAAAATATATTTATTGGGAATCTCTCCTTTTTTACTAGGTTTTGAGTGAAGGTTTCCTAGGTTGAGCAGTTTTTACCACCTGATTATCTTTTTGTGGGAAAAAATGGGTGAGTGGAAATATAGAGGCATCCAAAAGTATTTACAACACTACCAAGTGTTTGGATGCAGTCATTTTAAAAAGATTTACTTTTCTAAAATAAATATAAATTAATTCCAACCATAAAGGAACGATATACCATTTGTAGAATTTATCTTGTTAGAAGTGTCTTAAATTTTCTTTATTAGTTTTATTGTTACACTGATAGGAATGCTATCAGGATCTTATTAGAGTATTAAGGATATATCAATAATTTGCTAGGGGTTTGTTATTCTTGTTGGTCTTAAAATGCTGGGGAGAGAAATGAAAAAGATACCCATTATTGTGGTGAATGAATTAGAATTTGAGAGAGATCTCAAGAGGGGAGGGTTCAAATTTCTCAATTACTTGGCTTATTTTGTAAGTTCCTTTACCTTTTATACTACAATACATTGCCGTCCTATTTTAGTTCCTATCATACTTATCTTTATTTTGGTTAAAAAGAATTTTAAGTTCAATGAAACACATATTTAAAATCTTGATGTAGAAATCCCGTGTCCCTTGCGTGATCAGCTTTCACACAGTTCTGAAAATTGTTGACAGCAGAAAGAACTGACCTTTTTACTTGGAATTGTTACTGCAACTCTTGGTAGATGATAACTCAACTGTATCTGGAATTTGAGGACCATTTATTCAGACTTGTATTTTCATTTAGAATTTAATGTTGATCAATGTTTCTTCTTAAGAAAACAATTAATTGTTGCTTAATATATTTAGACTTGCCTAACATAAACTATTTCCTATTCTGAAGAAAACATTCCAAGACTGCAGTTTTCTTTGGCGTGCTTAGAGGAGGTTTAATCGTGGCTAGGTTTTATGTCTTGTGAGCATTTGCGTCATTAGATTTCTTGAAATTATTCTTTAGGCCCGATACTTTTTTTTGGACTGGAGCCTTTTCTTGTAAGTTAGTTTCTGGTTTATTTTCTCTCAATGAAAGTTCGACTTTCCTGATTTAAAAAGTTTGGTTCCTTAGTTGTTACATATCTTATAGTCAATAAGCTTGGCTTACAACTATTTGGATATCAGATATGCATTGCCTTTTTGGGAATGTACGTTTGCTAAATAGGTTAAGCTTTTGTTTTGATCTTGAATACATTTCATTTTTCATTTCTTGTTCGAATGATTTTCATGCCAGAAATACCTACTCCAGCGACCAAGTTAACCAAAACTAAAGCAAACAAAATATATCTTTACACCTCTCTTTTCCATTTGGCAGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAGAAAACCTCTTGTAGGAACGGTGAGTTACTCGGCATTTGATCCATTTCCACCATTTCCAATTGTGAATACAGGCTACGTGCTTTTACAAAATATTCTTCTATATAATGATTATGACAATTTTTACAAGTATAGCATCTCTTGTCCAGGATTCAGCAAGTGTCCTCTCATTATTCAACAAAATTGTTTGCTGTGTCGAGAAAGGTTTGTCTGTATCTGTTGAAGGAGGGAACGTAACCTCGTCGTGTCACTGTCAATAGGATTCGATCTTCATGATTGCAGCTAACTTCTGGGGAGTTAAAGCCGGAAAGATTGGGGAAGTAACTCCTTACCTTGATGTATAATAGCCATGAGCAACTGCTGTATAAGAAGATGAAACATCATATACAAATAGTTGATATTCCATTTCTTTCTTTAGTTTTACTTTCTACCGAAACTTATATCATTTTGTTTCAGTTAACTTCTGTTTGGATCTCAACTTTATGAGAATCAGTTCTAGAATTTCAAT GGAACTTGGTAGACACAGAGCTCTCAGCATACGGACCTCCGAAGGAAATTGAGAATTGGAAGATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAGAAAACCTCTTGTAGGAACGGATTCAGCAAGTGTCCTCTCATTATTCAACAAAATTGTTTGCTGTGTCGAGAAAGGTTTGTCTGTATCTGTTGAAGGAGGGAACGTAACCTCGTCGTGTCACTGTCAATAGGATTCGATCTTCATGATTGCAGCTAACTTCTGGGGAGTTAAAGCCGGAAAGATTGGGGAAGTAACTCCTTACCTTGATGTATAATAGCCATGAGCAACTGCTGTATAAGAAGATGAAACATCATATACAAATAGTTGATATTCCATTTCTTTCTTTAGTTTTACTTTCTACCGAAACTTATATCATTTTGTTTCAGTTAACTTCTGTTTGGATCTCAACTTTATGAGAATCAGTTCTAGAATTTCAAT ATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAG MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYGFQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFSAAAEYSRSL
BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_008451566.1 (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo]) HSP 1 Score: 258.8 bits (660), Expect = 9.6e-66 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_004136026.1 (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis sativus] >KGN44942.1 hypothetical protein Csa_7G397550 [Cucumis sativus]) HSP 1 Score: 254.2 bits (648), Expect = 2.4e-64 Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_022143748.1 (outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 249.2 bits (635), Expect = 7.6e-63 Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_022960078.1 (outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_022960079.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_023004690.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023004691.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023513746.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023513747.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62 Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_023880656.1 (outer envelope pore protein 16-4, chloroplastic-like [Quercus suber]) HSP 1 Score: 206.1 bits (523), Expect = 7.4e-50 Identity = 95/129 (73.64%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of MELO3C016000.2 vs. TAIR10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein) HSP 1 Score: 183.7 bits (465), Expect = 7.1e-47 Identity = 87/129 (67.44%), Postives = 107/129 (82.95%), Query Frame = 0
BLAST of MELO3C016000.2 vs. TAIR10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein) HSP 1 Score: 41.2 bits (95), Expect = 5.7e-04 Identity = 31/83 (37.35%), Postives = 42/83 (50.60%), Query Frame = 0
BLAST of MELO3C016000.2 vs. Swiss-Prot
Match: sp|Q9LZH8|OP164_ARATH (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45 Identity = 87/129 (67.44%), Postives = 107/129 (82.95%), Query Frame = 0
BLAST of MELO3C016000.2 vs. Swiss-Prot
Match: sp|Q5BIN4|TIM22_BOVIN (Mitochondrial import inner membrane translocase subunit Tim22 OS=Bos taurus OX=9913 GN=TIMM22 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04 Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|A0A1S3BSK4|A0A1S3BSK4_CUCME (outer envelope pore protein 16-4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492809 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 6.4e-66 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|A0A0A0K992|A0A0A0K992_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397550 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64 Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|B9SAS0|B9SAS0_RICCO (Protein translocase, putative OS=Ricinus communis OX=3988 GN=RCOM_1178330 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.4e-49 Identity = 95/129 (73.64%), Postives = 114/129 (88.37%), Query Frame = 0
BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|A0A2C9WMW0|A0A2C9WMW0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G219200 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 5.4e-49 Identity = 94/129 (72.87%), Postives = 113/129 (87.60%), Query Frame = 0
BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|B9I9R2|B9I9R2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G128900v3 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.6e-48 Identity = 95/129 (73.64%), Postives = 115/129 (89.15%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|