MELO3C015947.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C015947.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr01 : 31957855 .. 31958070 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGGAATGGATTTGGGAGAAGCAGAGGGGGGAGAGTAATAATAGTAAGGAAAATACGGTAAAATTGGATTCGGTGGCGGCGGAGCAATGCCTGGAAATTGGCCACCGTCGGACGGAGGGTACGGCTGGACAGAGGACGGCGGCGGCGGAGAAGGGTAGACGCATGCATCGCAGGAGGGAGGCGAGGGAGGAGGAGGGCATTGAGAAGTAG

mRNA sequence

ATGAAAAGGGAATGGATTTGGGAGAAGCAGAGGGGGGAGAGTAATAATAGTAAGGAAAATACGGTAAAATTGGATTCGGTGGCGGCGGAGCAATGCCTGGAAATTGGCCACCGTCGGACGGAGGGTACGGCTGGACAGAGGACGGCGGCGGCGGAGAAGGGTAGACGCATGCATCGCAGGAGGGAGGCGAGGGAGGAGGAGGGCATTGAGAAGTAG

Coding sequence (CDS)

ATGAAAAGGGAATGGATTTGGGAGAAGCAGAGGGGGGAGAGTAATAATAGTAAGGAAAATACGGTAAAATTGGATTCGGTGGCGGCGGAGCAATGCCTGGAAATTGGCCACCGTCGGACGGAGGGTACGGCTGGACAGAGGACGGCGGCGGCGGAGAAGGGTAGACGCATGCATCGCAGGAGGGAGGCGAGGGAGGAGGAGGGCATTGAGAAGTAG

Protein sequence

MKREWIWEKQRGESNNSKENTVKLDSVAAEQCLEIGHRRTEGTAGQRTAAAEKGRRMHRRREAREEEGIEK
Homology
[Close]
BLAST of MELO3C015947.2 vs. NCBI nr
Match: KGN44991.1 (hypothetical protein Csa_7G405960 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 61/71 (85.92%), Postives = 61/71 (85.92%), Query Frame = 0 

Query: 1  MKREWIWEKQRGESNNSKENTVKLDSVAAEQCLEIGHRRTEGTAGQRTAAAEKGRRMHRR 60
          MK E IWEKQRGESNNSKENTVKL S  AEQCLEIGHRRTEGTAGQR AA  KGRRMHR 
Sbjct: 1  MKMERIWEKQRGESNNSKENTVKLGSAEAEQCLEIGHRRTEGTAGQRMAAEGKGRRMHRT 60

Query: 61 REAREEEGIEK 72
          REAR EEGIEK
Sbjct: 61 REARVEEGIEK 71

[Close]
BLAST of MELO3C015947.2 vs. TrEMBL
Match: tr|A0A0A0KB51|A0A0A0KB51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405960 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.9e-22
Identity = 61/71 (85.92%), Postives = 61/71 (85.92%), Query Frame = 0 

Query: 1  MKREWIWEKQRGESNNSKENTVKLDSVAAEQCLEIGHRRTEGTAGQRTAAAEKGRRMHRR 60
          MK E IWEKQRGESNNSKENTVKL S  AEQCLEIGHRRTEGTAGQR AA  KGRRMHR 
Sbjct: 1  MKMERIWEKQRGESNNSKENTVKLGSAEAEQCLEIGHRRTEGTAGQRMAAEGKGRRMHRT 60

Query: 61 REAREEEGIEK 72
          REAR EEGIEK
Sbjct: 61 REARVEEGIEK 71

The following BLAST results are available for this feature:
BLAST of MELO3C015947.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44991.11.4e-2185.92hypothetical protein Csa_7G405960 [Cucumis sativus][more]
BLAST of MELO3C015947.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C015947.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C015947.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KB51|A0A0A0KB51_CUCSA8.9e-2285.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405960 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015947.2.1MELO3C015947.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..71

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C015947.2Csa7G405960Cucumber (Chinese Long) v2cumedB511
MELO3C015947.2CSPI07G17920Wild cucumber (PI 183967)cpimedB525
MELO3C015947.2CmoCh08G004400Cucurbita moschata (Rifu)cmomedB919
MELO3C015947.2CsGy7G016380Cucumber (Gy14) v2cgybmedB467
MELO3C015947.2Bhi09G000782Wax gourdmedwgoB255
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015947.2Watermelon (97103) v2medwmbB161
MELO3C015947.2Watermelon (97103) v2medwmbB182
MELO3C015947.2Watermelon (97103) v2medwmbB194
MELO3C015947.2Wax gourdmedwgoB199
MELO3C015947.2Wax gourdmedwgoB202
MELO3C015947.2Cucumber (Gy14) v2cgybmedB238
MELO3C015947.2Cucumber (Gy14) v1cgymedB106
MELO3C015947.2Cucumber (Gy14) v1cgymedB368
MELO3C015947.2Cucurbita maxima (Rimu)cmamedB251
MELO3C015947.2Cucurbita maxima (Rimu)cmamedB373
MELO3C015947.2Cucurbita maxima (Rimu)cmamedB459
MELO3C015947.2Cucurbita maxima (Rimu)cmamedB930
MELO3C015947.2Cucurbita moschata (Rifu)cmomedB234
MELO3C015947.2Cucurbita moschata (Rifu)cmomedB359
MELO3C015947.2Cucurbita moschata (Rifu)cmomedB446
MELO3C015947.2Cucurbita pepo (Zucchini)cpemedB145
MELO3C015947.2Cucurbita pepo (Zucchini)cpemedB341
MELO3C015947.2Cucurbita pepo (Zucchini)cpemedB350
MELO3C015947.2Cucurbita pepo (Zucchini)cpemedB598
MELO3C015947.2Wild cucumber (PI 183967)cpimedB269
MELO3C015947.2Cucumber (Chinese Long) v2cumedB268
MELO3C015947.2Melon (DHL92) v3.6.1medmedB043
MELO3C015947.2Melon (DHL92) v3.6.1medmedB096
MELO3C015947.2Bottle gourd (USVL1VR-Ls)lsimedB201
MELO3C015947.2Bottle gourd (USVL1VR-Ls)lsimedB266
MELO3C015947.2Watermelon (Charleston Gray)medwcgB155
MELO3C015947.2Watermelon (Charleston Gray)medwcgB185
MELO3C015947.2Watermelon (97103) v1medwmB181
MELO3C015947.2Watermelon (97103) v1medwmB213
MELO3C015947.2Silver-seed gourdcarmedB0112
MELO3C015947.2Silver-seed gourdcarmedB0573
MELO3C015947.2Silver-seed gourdcarmedB0767
MELO3C015947.2Silver-seed gourdcarmedB0821
MELO3C015947.2Cucumber (Chinese Long) v3cucmedB272
MELO3C015947.2Cucumber (Chinese Long) v3cucmedB461
MELO3C015947.2Cucumber (Chinese Long) v3cucmedB538