MELO3C015859 (gene) Melon (DHL92) v3.5.1

NameMELO3C015859
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMinor tail protein Gp28
Locationchr1 : 29803047 .. 29803382 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCGAGTCGAAGAAAAGGTGCCGGTAAAGCCGCTATTGCTGCCGCCTCGCGCCGGCAGTGGAAAGTTGGGGATCTTGTACTGGCTAAAGTGAAAGGATTCCCTGCTTGGCCTGCTACGGTATGGTTTAGTTTATTGAGCTTTGTGTGTGGTTTTTTTTTTAGGATGGGGTAGTGTTTTCTTTTGTGCTTAGTAAGGGTTTTGGATTGCATGTTTTTAGGGGTATTTGGGTTTTGGGGTGTTTAGTGGTATGGGAAGGTGTTGGAGATAGTTTAGCAAGATTGTGGTGGTTCTGATTGAGAAAAGGTTTTAACTTTATGGATATCTGATGGGTTTTCATTGCACAATTTGGGAGCTTTTGGAATTTTAGTTCACAGGTTTGGGGATACGATGGTTTTGTGGACTATATTTATTTGGATGGGTTGTTGGGAAGCGTGCTAACGATTATGGAACTGAATGGAATCTACAAAATTTAGAAATTTCAGTTTTTCTTCTTTGTTCTTCTTGTTGACTTTAATCTTTTTGCGGTTGGAAATTAGTAGATGTACTGATAGTTGCGGCGACTTAAAATACATCATCAAGGCAACAAATTTCTGGAAAATATTGGAACTGGAACAATCACATGCCACCCAATTTCATTATTTTTTGTCTATAATTCTGGATTAAATGTTTTCTAATATTTCTTTCCATTTTTGGAAGTTTAGGTTAAGTTAGGAAAGACTGTAATTTTCTGATTTCACGTGCAAGCTGATTTTGATGACAGGTGAGCGAGCCAGAGAAATGGGGTTATTCAACCGATTGGAAGAAAGTTCTTGTCTATTTCTTTGGAACCCAGCAGATGTGA

mRNA sequence

ATGGCACCGAGTCGAAGAAAAGGTGCCGGTAAAGCCGCTATTGCTGCCGCCTCGCGCCGGCAGTGGAAAGTTGGGGATCTTGTACTGGCTAAAGTGAAAGGATTCCCTGCTTGGCCTGCTACGGTGAGCGAGCCAGAGAAATGGGGTTATTCAACCGATTGGAAGAAAGTTCTTGTCTATTTCTTTGGAACCCAGCAGATGTGA

Coding sequence (CDS)

ATGGCACCGAGTCGAAGAAAAGGTGCCGGTAAAGCCGCTATTGCTGCCGCCTCGCGCCGGCAGTGGAAAGTTGGGGATCTTGTACTGGCTAAAGTGAAAGGATTCCCTGCTTGGCCTGCTACGGTGAGCGAGCCAGAGAAATGGGGTTATTCAACCGATTGGAAGAAAGTTCTTGTCTATTTCTTTGGAACCCAGCAGATGTGA

Protein sequence

MAPSRRKGAGKAAIAAASRRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDWKKVLVYFFGTQQM*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0004602 glutathione peroxidase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU60183melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015859T2MELO3C015859T2mRNA
MELO3C015859T1MELO3C015859T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU60183MU60183transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainPFAMPF00855PWWPcoord: 23..65
score: 3.1
IPR000313PWWP domainPROFILEPS50812PWWPcoord: 24..67
score: 10
NoneNo IPR availableGENE3DG3DSA:2.30.30.160coord: 18..66
score: 1.8
NoneNo IPR availablePANTHERPTHR12550HEPATOMA-DERIVED GROWTH FACTOR-RELATEDcoord: 2..67
score: 1.8
NoneNo IPR availablePANTHERPTHR12550:SF5HUA2-LIKE PROTEIN 2-RELATEDcoord: 2..67
score: 1.8
NoneNo IPR availableunknownSSF63748Tudor/PWWP/MBTcoord: 19..66
score: 2.29