MELO3C015786 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015786
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGTP-binding family protein
Locationchr1 : 28745766 .. 28747102 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGAGGTCCATTTAGACAAGAATGTCAAGTTGTTGGATTGCTCTGGTGTTGTGATGCTAAGAACTAAAGAAAACGAGCCATCTATAGCTTTGCGGAATTGCAAAAGAACTGAAAAGTTGGAAGATCCCGTTGCTTCTAGTAAATTGATTTTTCAATGTTTTCCTTCTTTTTGTAATCCTTGCGTTTTGTATTGGAAATCTTATTTACTACTTTTGGATAATCATAGTTAAGTATATCTTGAAGCTCTGTCCTTCAAAAACCTTAGTAACTCTATATAAGCTTTCAAGCTTCGATACGGTGGACGATTTTCTGCAAAAGGTAGCTGTTATTCGGGGCAAACTTAAGAAAGGGGGAATCGTGGATATTGGAGCTGCTGCTAGAATTGTTCTACATGACTGGAACGAAGGTATTTCTCTTTGATATTTTCAATTCTGTTTTATTATTTTGAAAAAGAACCACATTCTAAGCTCCCTATTTGAAAAGTGTAAAACAAGTGGAACTTTCTCCCAACTAAACCACTCTTTTTAGCATTATTGAATTAAAGTTTAATGGAATATTTACCCTTGTAGTACCCAACCTTTGATGAATACGTGTGTTTGGTCTCTCAATTTTAAAAATGTATCTTTTTAATCCTCAGATTTATAAGAATATATCTATTTGGTCATCGAGCTTTCAAAATGTACTTTTTTAGACCTTTAGTTTTTAAAATTATGTTTAAAAGTCCTTCGAGTAACTTATACTTTTATTTTAAATAATTATATGACATTTTAAATTAGTAGAATATTTAAAAATCATATCCTCACTAAAACTATTTTTTTTTCTAATTTCAAATATCATATAATTATTTTTTAAAAAATCAAAGAATACTTCTAGGACCATTTAAATCTATTTTAGAAAACTCATGGATTAAAAGTTGCATTTTAGAATCTTCGAGATCAAATGAGCCAATTCTAATAAATTTGGGACTAAAAAAGTACATCTTTAAGACTAAATGCATTTATACATCAAAACTTGGAGACTAAAAAGATAATTTTTCCAACTCTAAAAGTTATCGATGCAAAAGGATCGGAGAGATCACAATTCCCGCCAAACATAACAACATGTTTGTTTTCTCTTTGATAATAAATTAGCTTTTATTGTTTAGATAACTTTTTCAAATGCTGACTTTAGTTTGGTGTTTGATCATGATGTCATAGGTAAAATTCCATATTACACAATACCACCCATTAGAAGTCAGATAGAACCTTCAGAGGCAAGGATTGTCATCGAGCTCAGGAAGGATTTCAACATGTACGAAGTTATGGTGGTGAATCTTCATTCATTGGAAGCCTAA

mRNA sequence

ATGCAAGAGGTCCATTTAGACAAGAATGTCAAGTTGTTGGATTGCTCTGGTGTTGTGATGCTAAGAACTAAAGAAAACGAGCCATCTATAGCTTTGCGGAATTGCAAAAGAACTGAAAAGTTGGAAGATCCCGTTGCTTCTATTAAGTATATCTTGAAGCTCTGTCCTTCAAAAACCTTAGTAACTCTATATAAGCTTTCAAGCTTCGATACGGTGGACGATTTTCTGCAAAAGGTAGCTGTTATTCGGGGCAAACTTAAGAAAGGGGGAATCGTGGATATTGGAGCTGCTGCTAGAATTGTTCTACATGACTGGAACGAAGGTAAAATTCCATATTACACAATACCACCCATTAGAAGTCAGATAGAACCTTCAGAGGCAAGGATTGTCATCGAGCTCAGGAAGGATTTCAACATGTACGAAGTTATGGTGGTGAATCTTCATTCATTGGAAGCCTAA

Coding sequence (CDS)

ATGCAAGAGGTCCATTTAGACAAGAATGTCAAGTTGTTGGATTGCTCTGGTGTTGTGATGCTAAGAACTAAAGAAAACGAGCCATCTATAGCTTTGCGGAATTGCAAAAGAACTGAAAAGTTGGAAGATCCCGTTGCTTCTATTAAGTATATCTTGAAGCTCTGTCCTTCAAAAACCTTAGTAACTCTATATAAGCTTTCAAGCTTCGATACGGTGGACGATTTTCTGCAAAAGGTAGCTGTTATTCGGGGCAAACTTAAGAAAGGGGGAATCGTGGATATTGGAGCTGCTGCTAGAATTGTTCTACATGACTGGAACGAAGGTAAAATTCCATATTACACAATACCACCCATTAGAAGTCAGATAGAACCTTCAGAGGCAAGGATTGTCATCGAGCTCAGGAAGGATTTCAACATGTACGAAGTTATGGTGGTGAATCTTCATTCATTGGAAGCCTAA

Protein sequence

MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTLVTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRSQIEPSEARIVIELRKDFNMYEVMVVNLHSLEA*
Homology
[Close]
BLAST of MELO3C015786 vs. Swiss-Prot
Match: NSN1_ARATH (Guanine nucleotide-binding protein-like NSN1 OS=Arabidopsis thaliana GN=NSN1 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 8.7e-54
Identity = 103/142 (72.54%), Postives = 117/142 (82.39%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           +QEVHLDKNVKLLDC GVVML++  N+ SIALRNCKR EKL+DPV+ +K ILKLCP   L
Sbjct: 291 LQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKDML 350

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYK+ SF+ VDDFL KVA +RGKLKKGG+VDI AAARIVLHDWNEGKIPYYT+PP R 
Sbjct: 351 VTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYTMPPKRD 410

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q   +E++IV EL KDFN+ EV
Sbjct: 411 QGGHAESKIVTELAKDFNIDEV 432

[Close]
BLAST of MELO3C015786 vs. Swiss-Prot
Match: GNL3_CAEEL (Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis elegans GN=nst-1 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 57/143 (39.86%), Postives = 92/143 (64.34%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEP-SIALRNCKRTEKLEDPVASIKYILKLCPSKT 60
           +QEV LDKN++L+D  GV+++  K+ +P  +AL+N  R + L DP+A +  IL+ C  +T
Sbjct: 297 IQEVELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKET 356

Query: 61  LVTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIR 120
           ++  Y L+ F++VD FL ++A   GKL++G   D+ AAA+ VL+DWN GK+ YYT PP +
Sbjct: 357 IMLHYNLADFNSVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYYTHPPEQ 416

Query: 121 SQIEPS---EARIVIELRKDFNM 140
              +      A +V +  K+F++
Sbjct: 417 GTAKEDIVVPAEVVSQFSKEFDI 439

[Close]
BLAST of MELO3C015786 vs. Swiss-Prot
Match: GNL3_DICDI (Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum GN=gnl3 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23
Identity = 54/116 (46.55%), Postives = 75/116 (64.66%), Query Frame = 1 

Query: 2   QEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTLV 61
           QEVHLDKNVKLLD  G+V ++   +E +I LRN  + EK+ DP+A +  IL  C  K ++
Sbjct: 302 QEVHLDKNVKLLDSPGIVPIKGNVDE-NIILRNVVKLEKVLDPIAPVDAILSRCSQKQIL 361

Query: 62  TLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPP 118
            +Y+++ + +  DFL +VA  R K+ KGGI D+ + A  V+ DW  GKIP+YT PP
Sbjct: 362 DIYEIAQYQSTTDFLTQVAAKRKKIVKGGIADLRSTAISVIRDWTGGKIPFYTQPP 416

[Close]
BLAST of MELO3C015786 vs. Swiss-Prot
Match: GNL3L_BOVIN (Guanine nucleotide-binding protein-like 3-like protein OS=Bos taurus GN=GNL3L PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20
Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEV+LDK ++LLD  G+V      +E    LRNC   +KL DPV  ++ IL+ C  + +
Sbjct: 283 MQEVYLDKFIRLLDAPGIVP--GPNSEVGTILRNCIHVQKLADPVTPVETILQRCNLEEI 342

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
            + Y +S F T + FL  VA   GK KKGGI     AA+ VL DW  GKI +YT+PP   
Sbjct: 343 SSYYGVSGFQTTEHFLTAVAHRLGKKKKGGIYSQEQAAKAVLADWVSGKISFYTLPPSTH 402

Query: 121 QIEPS-EARIVIELRKDFNMYEVMVVNLHSLE 152
            +     A IV E+ + F++ +    N  ++E
Sbjct: 403 TLPTHLSAEIVKEMTEVFDIEDTEQANEDTME 432

[Close]
BLAST of MELO3C015786 vs. Swiss-Prot
Match: GNL3L_MOUSE (Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus GN=Gnl3l PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-20
Identity = 59/152 (38.82%), Postives = 83/152 (54.61%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEV+LDK ++LLD  G+V      +E    LRNC   +KL DPV  ++ IL+ C  + +
Sbjct: 284 MQEVYLDKFIRLLDAPGIVP--GPNSEVGTILRNCIHVQKLADPVTPVETILQRCNLEEI 343

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
            + Y +S F T + FL  VA   GK KKGG+     AA+ VL DW  GKI +YT+PP   
Sbjct: 344 SSYYGVSGFQTTEHFLTAVAHRLGKKKKGGVYSQEQAAKAVLADWVSGKISFYTLPPPTH 403

Query: 121 QIEPS-EARIVIELRKDFNMYEVMVVNLHSLE 152
            +     A IV E+ + F++ +    N  ++E
Sbjct: 404 TLPTHLSAEIVKEMTEVFDIEDTEHANEDTME 433

[Close]
BLAST of MELO3C015786 vs. TrEMBL
Match: A0A0A0KAF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387750 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-66
Identity = 130/142 (91.55%), Postives = 135/142 (95.07%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEVHLDKNVKLLDC GVVMLR+KENEPSIALRNCKR EKLEDPVA +K ILKLCPSKTL
Sbjct: 299 MQEVHLDKNVKLLDCPGVVMLRSKENEPSIALRNCKRIEKLEDPVAPVKEILKLCPSKTL 358

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYT+PPIRS
Sbjct: 359 VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTMPPIRS 418

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q+EPSEARIV EL KDFN+ EV
Sbjct: 419 QVEPSEARIVTELGKDFNIDEV 440

[Close]
BLAST of MELO3C015786 vs. TrEMBL
Match: A0A0A0L6R3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G111230 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.5e-62
Identity = 122/139 (87.77%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEVHLDKNVKLLDC GVVMLRTKENEPSIALRNCKR EKLEDP+A +K ILKLCPSKTL
Sbjct: 299 MQEVHLDKNVKLLDCPGVVMLRTKENEPSIALRNCKRIEKLEDPIAPVKEILKLCPSKTL 358

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVD+ AAARIVLHDWNEGKIPYYT+PP+R+
Sbjct: 359 VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDVAAAARIVLHDWNEGKIPYYTMPPVRN 418

Query: 121 QIEPSEARIVIELRKDFNM 140
           Q EPSEARIV EL K+F++
Sbjct: 419 Q-EPSEARIVSELGKEFDI 436

[Close]
BLAST of MELO3C015786 vs. TrEMBL
Match: M5VM86_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023482mg PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.8e-56
Identity = 111/142 (78.17%), Postives = 123/142 (86.62%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEV LD NVKLLDC GVVMLR+KEN+ SIALRNCKR EKLEDP+A +K ILKLCP + L
Sbjct: 296 MQEVQLDNNVKLLDCPGVVMLRSKENDASIALRNCKRIEKLEDPIAPVKEILKLCPDRLL 355

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKL SFD+VDDFL KVA +RGKLKKGGIVDI AAARIVLHDWNEGKIPYYT+PP+R+
Sbjct: 356 VTLYKLPSFDSVDDFLHKVATVRGKLKKGGIVDISAAARIVLHDWNEGKIPYYTMPPVRN 415

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q EPSEA IV +L K FN+ EV
Sbjct: 416 QEEPSEANIVSQLGKVFNIDEV 437

[Close]
BLAST of MELO3C015786 vs. TrEMBL
Match: A0A067JR15_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17559 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.5e-55
Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEV LDKNVKLLDC GVV+L++KEN+ SIALRNCKR EKL+DPV+ +K IL LCP++ L
Sbjct: 298 MQEVQLDKNVKLLDCPGVVLLKSKENDASIALRNCKRIEKLDDPVSPVKEILNLCPARLL 357

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYK+ +F++VDDFLQKVA +RG+LKKGGIVD+ AAARIVLHDWNEGKIPYYT+PPIR+
Sbjct: 358 VTLYKIPNFESVDDFLQKVATVRGRLKKGGIVDVEAAARIVLHDWNEGKIPYYTMPPIRN 417

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           + EPSEARIV EL K+FN+ EV
Sbjct: 418 REEPSEARIVSELGKEFNVDEV 439

[Close]
BLAST of MELO3C015786 vs. TrEMBL
Match: B9GNJ3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s24220g PE=4 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-54
Identity = 106/142 (74.65%), Postives = 124/142 (87.32%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEV LDKNVKLLDC GVVML++ E++ S+ALRNCKR EKL+DPV  +K ILKLCP + L
Sbjct: 300 MQEVQLDKNVKLLDCPGVVMLKSVESDASVALRNCKRIEKLDDPVGPVKEILKLCPDRLL 359

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYK+ SFD+VDDFLQKVA +RG+LKKGGIVD+ AAARIVLHDWNEGKIPYYT+PP R+
Sbjct: 360 VTLYKIPSFDSVDDFLQKVATVRGRLKKGGIVDVDAAARIVLHDWNEGKIPYYTMPPARN 419

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q EPSEA+IV EL K+FN+ EV
Sbjct: 420 QGEPSEAKIVSELGKEFNIDEV 441

[Close]
BLAST of MELO3C015786 vs. TAIR10
Match: AT3G07050.1 (AT3G07050.1 GTP-binding family protein)

HSP 1 Score: 211.1 bits (536), Expect = 4.9e-55
Identity = 103/142 (72.54%), Postives = 117/142 (82.39%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           +QEVHLDKNVKLLDC GVVML++  N+ SIALRNCKR EKL+DPV+ +K ILKLCP   L
Sbjct: 291 LQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKDML 350

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYK+ SF+ VDDFL KVA +RGKLKKGG+VDI AAARIVLHDWNEGKIPYYT+PP R 
Sbjct: 351 VTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYTMPPKRD 410

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q   +E++IV EL KDFN+ EV
Sbjct: 411 QGGHAESKIVTELAKDFNIDEV 432

[Close]
BLAST of MELO3C015786 vs. TAIR10
Match: AT1G52980.1 (AT1G52980.1 GTP-binding family protein)

HSP 1 Score: 81.6 bits (200), Expect = 4.5e-16
Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = 1 

Query: 2   QEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTLV 61
           Q + L K + L+DC GVV  ++++ E  I L+   R   LED    I  +L+    + L 
Sbjct: 348 QYITLTKRIFLIDCPGVVY-QSRDTETDIVLKGVVRVTNLEDASEHIGEVLRRVKKEHLQ 407

Query: 62  TLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRSQ 121
             YK+  ++   DFL ++    GKL KGG  D+   A+++LHDW  G+IP++ +PP +  
Sbjct: 408 RAYKIKDWEDDHDFLLQLCKSSGKLLKGGEPDLMTGAKMILHDWQRGRIPFF-VPPPKLD 467

Query: 122 IEPSEARIVI 132
              SE+ +++
Sbjct: 468 NVASESEVIV 475

[Close]
BLAST of MELO3C015786 vs. NCBI nr
Match: gi|449458478|ref|XP_004146974.1| (PREDICTED: guanine nucleotide-binding protein-like NSN1 [Cucumis sativus])

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66
Identity = 130/142 (91.55%), Postives = 135/142 (95.07%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEVHLDKNVKLLDC GVVMLR+KENEPSIALRNCKR EKLEDPVA +K ILKLCPSKTL
Sbjct: 299 MQEVHLDKNVKLLDCPGVVMLRSKENEPSIALRNCKRIEKLEDPVAPVKEILKLCPSKTL 358

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYT+PPIRS
Sbjct: 359 VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTMPPIRS 418

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q+EPSEARIV EL KDFN+ EV
Sbjct: 419 QVEPSEARIVTELGKDFNIDEV 440

[Close]
BLAST of MELO3C015786 vs. NCBI nr
Match: gi|659100896|ref|XP_008451323.1| (PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 2.6e-66
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEVHLD NVKLLDC GVVMLR+KENEPSIALRNCKR EKLEDPVAS+K ILKLCPSKTL
Sbjct: 299 MQEVHLDNNVKLLDCPGVVMLRSKENEPSIALRNCKRIEKLEDPVASVKEILKLCPSKTL 358

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKLS+FDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYT+PPIRS
Sbjct: 359 VTLYKLSNFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTMPPIRS 418

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q+EPSEARIV EL KDFN+ EV
Sbjct: 419 QVEPSEARIVTELGKDFNINEV 440

[Close]
BLAST of MELO3C015786 vs. NCBI nr
Match: gi|778676418|ref|XP_004133732.2| (PREDICTED: guanine nucleotide-binding protein-like NSN1 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 5.1e-62
Identity = 122/139 (87.77%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEVHLDKNVKLLDC GVVMLRTKENEPSIALRNCKR EKLEDP+A +K ILKLCPSKTL
Sbjct: 299 MQEVHLDKNVKLLDCPGVVMLRTKENEPSIALRNCKRIEKLEDPIAPVKEILKLCPSKTL 358

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVD+ AAARIVLHDWNEGKIPYYT+PP+R+
Sbjct: 359 VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDVAAAARIVLHDWNEGKIPYYTMPPVRN 418

Query: 121 QIEPSEARIVIELRKDFNM 140
           Q EPSEARIV EL K+F++
Sbjct: 419 Q-EPSEARIVSELGKEFDI 436

[Close]
BLAST of MELO3C015786 vs. NCBI nr
Match: gi|659102616|ref|XP_008452223.1| (PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 8.7e-62
Identity = 122/139 (87.77%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEVHLDKNVKLLDC GVVMLRTKENEPSIALRNCKR EKLEDP+A +K ILKLCPSKTL
Sbjct: 299 MQEVHLDKNVKLLDCPGVVMLRTKENEPSIALRNCKRIEKLEDPIAPVKEILKLCPSKTL 358

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVD+ AAARIVLHDWNEGKIPYYT+PP+R+
Sbjct: 359 VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDVEAAARIVLHDWNEGKIPYYTMPPVRN 418

Query: 121 QIEPSEARIVIELRKDFNM 140
           Q EPSEARIV EL K+F++
Sbjct: 419 Q-EPSEARIVSELGKEFDI 436

[Close]
BLAST of MELO3C015786 vs. NCBI nr
Match: gi|645259728|ref|XP_008235500.1| (PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Prunus mume])

HSP 1 Score: 225.7 bits (574), Expect = 5.5e-56
Identity = 111/142 (78.17%), Postives = 123/142 (86.62%), Query Frame = 1 

Query: 1   MQEVHLDKNVKLLDCSGVVMLRTKENEPSIALRNCKRTEKLEDPVASIKYILKLCPSKTL 60
           MQEV LD NVKLLDC GVVMLR+KEN+ SIALRNCKR EKLEDP+A +K ILKLCP + L
Sbjct: 296 MQEVQLDNNVKLLDCPGVVMLRSKENDASIALRNCKRIEKLEDPIAPVKEILKLCPDRLL 355

Query: 61  VTLYKLSSFDTVDDFLQKVAVIRGKLKKGGIVDIGAAARIVLHDWNEGKIPYYTIPPIRS 120
           VTLYKL SFD+VDDFL KVA +RGKLKKGGIVDI AAARIVLHDWNEGKIPYYT+PP+R+
Sbjct: 356 VTLYKLPSFDSVDDFLHKVATVRGKLKKGGIVDISAAARIVLHDWNEGKIPYYTMPPVRN 415

Query: 121 QIEPSEARIVIELRKDFNMYEV 143
           Q EPSEA IV +L K FN+ EV
Sbjct: 416 QEEPSEANIVSQLGKVFNIDEV 437

The following BLAST results are available for this feature:
BLAST of MELO3C015786 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NSN1_ARATH8.7e-5472.54Guanine nucleotide-binding protein-like NSN1 OS=Arabidopsis thaliana GN=NSN1 PE=... [more]
GNL3_CAEEL1.4e-2439.86Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis elegans GN=n... [more]
GNL3_DICDI2.1e-2346.55Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum GN... [more]
GNL3L_BOVIN1.3e-2039.47Guanine nucleotide-binding protein-like 3-like protein OS=Bos taurus GN=GNL3L PE... [more]
GNL3L_MOUSE2.8e-2038.82Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus GN=Gnl3l ... [more]
BLAST of MELO3C015786 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAF7_CUCSA1.1e-6691.55Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387750 PE=4 SV=1[more]
A0A0A0L6R3_CUCSA3.5e-6287.77Uncharacterized protein OS=Cucumis sativus GN=Csa_3G111230 PE=4 SV=1[more]
M5VM86_PRUPE3.8e-5678.17Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023482mg PE=4 SV=1[more]
A0A067JR15_JATCU5.5e-5574.65Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17559 PE=4 SV=1[more]
B9GNJ3_POPTR1.6e-5474.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s24220g PE=4 SV=2[more]
BLAST of MELO3C015786 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07050.14.9e-5572.54 GTP-binding family protein[more]
AT1G52980.14.5e-1633.08 GTP-binding family protein[more]
BLAST of MELO3C015786 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458478|ref|XP_004146974.1|1.5e-6691.55PREDICTED: guanine nucleotide-binding protein-like NSN1 [Cucumis sativus][more]
gi|659100896|ref|XP_008451323.1|2.6e-6690.85PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Cucumis melo][more]
gi|778676418|ref|XP_004133732.2|5.1e-6287.77PREDICTED: guanine nucleotide-binding protein-like NSN1 [Cucumis sativus][more]
gi|659102616|ref|XP_008452223.1|8.7e-6287.77PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Cucumis melo][more]
gi|645259728|ref|XP_008235500.1|5.5e-5678.17PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023179GTP-bd_ortho_bundle_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048825 cotyledon development
biological_process GO:0048444 floral organ morphogenesis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0048367 shoot system development
biological_process GO:2000026 regulation of multicellular organismal development
biological_process GO:0050794 regulation of cellular process
biological_process GO:0008150 biological_process
biological_process GO:0001510 RNA methylation
biological_process GO:2000024 regulation of leaf development
biological_process GO:0045604 regulation of epidermal cell differentiation
biological_process GO:0045995 regulation of embryonic development
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0010077 maintenance of inflorescence meristem identity
cellular_component GO:0005730 nucleolus
cellular_component GO:0005575 cellular_component
cellular_component GO:0009506 plasmodesma
molecular_function GO:0005525 GTP binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0003924 GTPase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015786T1MELO3C015786T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023179GTP-binding protein, orthogonal bundle domainGENE3DG3DSA:1.10.1580.10coord: 52..110
score: 2.
NoneNo IPR availablePANTHERPTHR11089GTP-BINDING PROTEIN-RELATEDcoord: 1..142
score: 1.5
NoneNo IPR availablePANTHERPTHR11089:SF30GUANINE NUCLEOTIDE-BINDING PROTEIN-LIKE 3 HOMOLOGcoord: 1..142
score: 1.5

Synteny