MELO3C015742 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015742
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionViral Fc-gamma receptor-like protein UL119
Locationchr1 : 27864601 .. 27865319 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAATCCAGAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATGGGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAAAAACTCAGTTCTTCCCAGATTATCCGTGGAGATATCTTTGTCTGAGGGAAAGAGCGCATGGGTCTTGCAATCTTCTATCCACAATGAGGCTCCTAATTTTGGCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTAATGTTACCAAGGTCCCTGGAGAGTTCTGCTTTATTGACTGCTATTGGGAGTGGTTGGAGTTTGTAGTTGGTCGAAATACACGATTTCTTTACAGTACTCGTTTATATGGTGCCGTAACAGCTTATTTATACATTTATGATCGTAACAGTGATGTTGTTCAAGTATTTTGTGAAGCATGGTGTCCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCCATTTCTTTGTGGGACTTATGGTCCTTTGGAGGTCTTCTAAGAATGACTCCCAAGTAACTATTGGCTCCTGGATTTCGTTCTGGTATCTTGGATCTAGGAGCTATGATAAGCCAACAATGCAAAAGCAAAAGAAGGTGTCACGCTCCAAATCTACTCAAAACCCTGATGGTTTGAAGATCCAAGCTCGTGAGTGA

mRNA sequence

ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAATCCAGAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATGGGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAAAAACTCAGTTCTTCCCAGATTATCCGTGGAGATATCTTTGTCTGAGGGAAAGAGCGCATGGGTCTTGCAATCTTCTATCCACAATGAGGCTCCTAATTTTGGCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTAATGTTACCAAGGTCCCTGGAGAGTTCTGCTTTATTGACTGCTATTGGGAGTGGAGCTATGATAAGCCAACAATGCAAAAGCAAAAGAAGGTGTCACGCTCCAAATCTACTCAAAACCCTGATGGTTTGAAGATCCAAGCTCGTGAGTGA

Coding sequence (CDS)

ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAATCCAGAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATGGGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAAAAACTCAGTTCTTCCCAGATTATCCGTGGAGATATCTTTGTCTGAGGGAAAGAGCGCATGGGTCTTGCAATCTTCTATCCACAATGAGGCTCCTAATTTTGGCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTAATGTTACCAAGGTCCCTGGAGAGTTCTGCTTTATTGACTGCTATTGGGAGTGGAGCTATGATAAGCCAACAATGCAAAAGCAAAAGAAGGTGTCACGCTCCAAATCTACTCAAAACCCTGATGGTTTGAAGATCCAAGCTCGTGAGTGA

Protein sequence

MVYFTERFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGAFADHWPRLDKNSVLPRLSVEISLSEGKSAWVLQSSIHNEAPNFGRALTLGQRLIEGQTRWGNVTKVPGEFCFIDCYWEWSYDKPTMQKQKKVSRSKSTQNPDGLKIQARE*
Homology
[Close]
BLAST of MELO3C015742 vs. TrEMBL
Match: M1AKM4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009586 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.6e-06
Identity = 33/113 (29.20%), Postives = 55/113 (48.67%), Query Frame = 1 

Query: 12  VRHLVILSDRNQSREDGLSLIVEKPWAGAFADHWPRLDKNSVLPR-LSVEISLSEGK-SA 71
           +RHL++ ++    +   +  +   P  G +A+ WP L K   +    SV    S      
Sbjct: 14  LRHLIVETEEGGEQ---IRFLTHDPLVGRYANQWPSLKKPFHMANWTSVHTHTSNNLLRL 73

Query: 72  WVLQSSIHNEAPNFGRALTLGQRLIEGQTRWGNVTKVPGEFCFIDCYWEWSYD 123
           W LQ+  H+         +LG+R+I+G  RWG+  +V GE+  I  YW+W+ D
Sbjct: 74  WSLQAPYHHHTNIATHLPSLGRRIIQGDIRWGSTMEVEGEYHHIPGYWKWTED 123

[Close]
BLAST of MELO3C015742 vs. NCBI nr
Match: gi|659082744|ref|XP_008442010.1| (PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 4.0e-51
Identity = 95/119 (79.83%), Postives = 103/119 (86.55%), Query Frame = 1 

Query: 1   MVYFTERFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGAFADHWPRLDKNSVLPRLSVE 60
           M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLD +S+LPRLSVE
Sbjct: 8   MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67

Query: 61  ISLSEGKSAWVLQSSIHNEAPNFGRALTLGQRLIEGQTRWGNVTKVPGEFCFIDCYWEW 120
           I L EGK+AWVLQSSIHNE PN  R LTLGQ LIEGQTRWG +TKVP EFCF DCYWEW
Sbjct: 68  IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEW 126

[Close]
BLAST of MELO3C015742 vs. NCBI nr
Match: gi|659098612|ref|XP_008450227.1| (PREDICTED: uncharacterized protein LOC103491890 [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 3.1e-19
Identity = 60/127 (47.24%), Postives = 64/127 (50.39%), Query Frame = 1 

Query: 65  EGKSAWVLQSSIHNEAPNFGRALTLGQRLIEGQTRWGNVTKVPGEFCFIDCYWEW----- 124
           EGK    +++   N      +ALTLGQRLIE Q RWG VTKVP EFCF DCYWEW     
Sbjct: 188 EGKGTMGIETHHGNRILTNVQALTLGQRLIECQIRWGTVTKVPREFCFSDCYWEWLELVV 247

Query: 125 ------------------------------------SYDKPTMQKQKKVSRSKSTQNPDG 151
                                                YDKPT QKQKK SRSKSTQNPDG
Sbjct: 248 GRNTRLLYSTRLYGIVTASLYTYDRNSDVVRAFCEACYDKPTTQKQKKASRSKSTQNPDG 307

[Close]
BLAST of MELO3C015742 vs. NCBI nr
Match: gi|848853669|ref|XP_012844633.1| (PREDICTED: uncharacterized protein LOC105964676 [Erythranthe guttata])

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-14
Identity = 47/134 (35.07%), Postives = 68/134 (50.75%), Query Frame = 1 

Query: 1   MVYFTE-RFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGAFADHWPRLDKNSVLPRLSV 60
           MVYF + R   GV  LV+L D  Q  + G +L+V  P  G +   WPRL     +   + 
Sbjct: 4   MVYFKDTRSPLGVEQLVVLDDERQPLDKGTTLVVHTPLIGKYPMQWPRLTSTYNINEWTH 63

Query: 61  EISLSEGKSAWVLQSSIHNEAPNFGRALTLGQRLIEGQTRWGNVTKVPGEFCFIDCYWEW 120
           E+SLS+    W LQ+S H  +       TLG  +I+G+  WG   +  GEF +   YWEW
Sbjct: 64  EVSLSKTLKVWTLQTSHHKYSDEIVHLPTLGHNIIKGKAMWGESLQFTGEFHYTPGYWEW 123

Query: 121 SYDKPTMQKQKKVS 134
           + D  +  + K +S
Sbjct: 124 TEDVLSRCESKLIS 137

[Close]
BLAST of MELO3C015742 vs. NCBI nr
Match: gi|848857215|ref|XP_012828660.1| (PREDICTED: uncharacterized protein LOC105949899 [Erythranthe guttata])

HSP 1 Score: 82.4 bits (202), Expect = 7.4e-13
Identity = 44/134 (32.84%), Postives = 66/134 (49.25%), Query Frame = 1 

Query: 1   MVYFTE-RFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGAFADHWPRLDKNSVLPRLSV 60
           M YF + R   GV  LV+L D  Q  + G +++V     G +   WPRL     +   + 
Sbjct: 1   MAYFKDTRSPLGVEQLVVLDDERQPLDKGTTMVVHTSLIGRYPMQWPRLTSTYNINEWTH 60

Query: 61  EISLSEGKSAWVLQSSIHNEAPNFGRALTLGQRLIEGQTRWGNVTKVPGEFCFIDCYWEW 120
           E+SLS+    W LQ+S H  +       TLG  +I+G+  WG   +  GEF +   YWEW
Sbjct: 61  EVSLSKTLKVWTLQTSHHKYSDEIVHLPTLGNNIIKGKAMWGESLQFTGEFHYTAGYWEW 120

Query: 121 SYDKPTMQKQKKVS 134
           + D  +  + K +S
Sbjct: 121 TEDVLSRCESKLIS 134

The following BLAST results are available for this feature:
BLAST of MELO3C015742 vs. TrEMBL
Match NameE-valueIdentityDescription
M1AKM4_SOLTU4.6e-0629.20Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009586 PE=4 SV=1[more]
BLAST of MELO3C015742 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082744|ref|XP_008442010.1|4.0e-5179.83PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo][more]
gi|659098612|ref|XP_008450227.1|3.1e-1947.24PREDICTED: uncharacterized protein LOC103491890 [Cucumis melo][more]
gi|848853669|ref|XP_012844633.1|1.3e-1435.07PREDICTED: uncharacterized protein LOC105964676 [Erythranthe guttata][more]
gi|848857215|ref|XP_012828660.1|7.4e-1332.84PREDICTED: uncharacterized protein LOC105949899 [Erythranthe guttata][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015742T1MELO3C015742T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015742Cucumber (Chinese Long) v3cucmeB538
MELO3C015742Watermelon (97103) v2mewmbB229
MELO3C015742Wax gourdmewgoB250
MELO3C015742Wax gourdmewgoB259
MELO3C015742Cucumber (Gy14) v1cgymeB636
MELO3C015742Cucurbita maxima (Rimu)cmameB825
MELO3C015742Cucurbita moschata (Rifu)cmomeB809
MELO3C015742Wild cucumber (PI 183967)cpimeB526
MELO3C015742Cucumber (Chinese Long) v2cumeB522
MELO3C015742Watermelon (Charleston Gray)mewcgB182
MELO3C015742Watermelon (97103) v1mewmB205
MELO3C015742Cucurbita pepo (Zucchini)cpemeB300
MELO3C015742Bottle gourd (USVL1VR-Ls)lsimeB186
MELO3C015742Cucumber (Gy14) v2cgybmeB458