MELO3C015741 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015741
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAlanine--tRNA ligase
Locationchr1 : 27860684 .. 27860909 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCTAATCTTGAGGAGGAGGTAAAGGTGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCGAAGGTATCAGGTGATAATCCCGACGGAAGGGGTTTAAGTGCTTTGGGAGTTCCTGATGTTCCACCACTGGTTTGCACGTTTTCCCTTCTAATTAATTTTTTTTTGTTTTGTTCATCTTCTTCATAAGTGA

mRNA sequence

ATGGCTCCTAATCTTGAGGAGGAGGTAAAGGTGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCGAAGGTATCAGGTGATAATCCCGACGGAAGGGGTTTAAGTGCTTTGGGAGTTCCTGATGTTCCACCACTGTGA

Coding sequence (CDS)

ATGGCTCCTAATCTTGAGGAGGAGGTAAAGGTGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCGAAGGTATCAGGTGATAATCCCGACGGAAGGGGTTTAAGTGCTTTGGGAGTTCCTGATGTTCCACCACTGTGA

Protein sequence

MAPNLEEEVKVHKDESDSSKSDRHWKRPLKKAKVSGDNPDGRGLSALGVPDVPPL*
Homology
[Close]
BLAST of MELO3C015741 vs. TrEMBL
Match: E5GCB9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.5e-13
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 1 

Query: 1   MAPNLEEEVKVHKDESDSSKSDRHWKRPLKKAKVSGDNPD 41
           MAPNLEEEVK HKDESDSSKSDRHWKRPLKKAKVSGD+PD
Sbjct: 344 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPD 383

[Close]
BLAST of MELO3C015741 vs. TrEMBL
Match: A0A0A0KQU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264300 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-07
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1 

Query: 1  MAPNLEEEVKVHKDESDSSKSDRHWKRPLKKAKVSGDNP 40
          MAP LE++V  HKDESD++KSDRHWKRPLKKAK     P
Sbjct: 1  MAPTLEKDVAEHKDESDNNKSDRHWKRPLKKAKTPAAKP 39

[Close]
BLAST of MELO3C015741 vs. NCBI nr
Match: gi|307136292|gb|ADN34118.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-13
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 1 

Query: 1   MAPNLEEEVKVHKDESDSSKSDRHWKRPLKKAKVSGDNPD 41
           MAPNLEEEVK HKDESDSSKSDRHWKRPLKKAKVSGD+PD
Sbjct: 344 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPD 383

[Close]
BLAST of MELO3C015741 vs. NCBI nr
Match: gi|700195620|gb|KGN50797.1| (hypothetical protein Csa_5G264300 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-07
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1 

Query: 1  MAPNLEEEVKVHKDESDSSKSDRHWKRPLKKAKVSGDNP 40
          MAP LE++V  HKDESD++KSDRHWKRPLKKAK     P
Sbjct: 1  MAPTLEKDVAEHKDESDNNKSDRHWKRPLKKAKTPAAKP 39

The following BLAST results are available for this feature:
BLAST of MELO3C015741 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB9_CUCME1.5e-1395.00Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KQU9_CUCSA3.5e-0769.23Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264300 PE=4 SV=1[more]
BLAST of MELO3C015741 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136292|gb|ADN34118.1|2.1e-1395.00hypothetical protein [Cucumis melo subsp. melo][more]
gi|700195620|gb|KGN50797.1|5.0e-0769.23hypothetical protein Csa_5G264300 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015741T1MELO3C015741T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015741Cucurbita pepo (Zucchini)cpemeB300
MELO3C015741Bottle gourd (USVL1VR-Ls)lsimeB186
MELO3C015741Cucumber (Gy14) v2cgybmeB458
MELO3C015741Cucumber (Chinese Long) v3cucmeB538
MELO3C015741Watermelon (97103) v2mewmbB229
MELO3C015741Wax gourdmewgoB250
MELO3C015741Wax gourdmewgoB259
MELO3C015741Cucumber (Gy14) v1cgymeB636
MELO3C015741Cucurbita maxima (Rimu)cmameB825
MELO3C015741Cucurbita moschata (Rifu)cmomeB809
MELO3C015741Wild cucumber (PI 183967)cpimeB526
MELO3C015741Cucumber (Chinese Long) v2cumeB522
MELO3C015741Watermelon (Charleston Gray)mewcgB182
MELO3C015741Watermelon (97103) v1mewmB205