MELO3C015565.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C015565.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionGamma-tubulin complex component
Locationchr02 : 2909750 .. 2915646 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAATTTTGTCGTGTCATTATATTCTACGAAAGTGTTGAATTTCGTAGTTCTCCCTCTCTCTCGCAAAATCGCTCAAAATCCCGTCGTCGAAACGATCCTCCGGCTCCCACTGTCGATACAATCCTCCAGCCGCCGCTGTCGAAAGAATTCTCCAGCCAACGCCGTTGAAATTCGGGACGTCGCAACGCCGTCGGAATCAAGTTCGCGCCATCTCTGTTCGTCGTCTTCCGCCGTCCAGTGCTTCTCCTTGCTCCCTCCTCTGTCCGGTTCGTTCTCCGTTCATTCCTATAGTGCTCGTTTTTGCTGGTTATTTCGTTTTCTTGCTTCCGTGTTCTAATGTTGGAATTTGACACGTAAATTTAAAATTCTTTTGAGTTTGATTGTGGTTTACTGAATAGCATTTCATTAGGGTTTTGTATCATAAACGTGAAGAAGATTACTTGTTGTTGCGAGTTATGAGCGAACGAGGAAGAGATTTTGAGTGAATGTTAGGATTTTGAGTATATGTTAGGATTTTGAATATATGTTAGGATGGAAAGGGTGAGAACAGAGGGAACGAGAACTTGAGCGAGGTGTCTGCAATTAGTAAGTAAAATTTCTCCATTACCACTGGTGCAAATTTCAAACAAAGGGGATATCTTGAGACACCAGAGTAGGAACACTTGTGGCACATGCTCTACGTGACTGATGAGCCCGAGACCACAAAAGAGAATTGAAAAAGAAAAACATCACCCATGGATGACAACAACTTTCACCACCAATCAATAAAATGAGGCTGGATTCAAGATGTATGCCTATGGATTCAACACCCTGATCCCAAATCGAAGATACCAAACAAAGGGACACAGAAATCATTGTCCATGAGATTGTAGAAACTCCACACTGAAAATTTCTATTAAAAACACAGGAATCTACAGTTTGTACAATCATTTGCACAAGCATCTTCAAAACATAAATCAAAAAATGATTCACACTAGAACGTGAATTAAGAATTTAAGAGGACAAGTTTGAAGCACACTGCCTTCGGCATTGAATCAATGTCTTCTTCTTGGACCATTGGAAAGCAACAAACCGTAAATTCTAGTTGCACTTTTTTACTTGAACCTTTTGAGTTGATTGTTGAACTTTAGGCCCCTATGGTGTTTTACTAATTTTGAAGATCTAAGTTGAAGTTTCTTCATTTGGTAACTGCTCTCGTCTTTTACTCTTTGTCAAATGGTAACAACTCCTTATTCACGTATGGATTAAAGTATATAGATCAAGTTGACCATCGTGCTTATCCTTTGGCCGACAGGTCCAATGCCAATTCAAATAAAAGGTTTAAGTCATGGTGACTACATACTTGGTATTTAATATTATAAAGAGTAACTATGATTATGATGGTTCAATAGATATATGGAAGAAATTATAGGTCTAGCCATACCATTATAGTATAGGTCAGGCTTACACTCTACTACTGATAGGTTTGTCTACTATTGTGGTACTTCAAAATGGTCCCATTAGACATTAATAAATGTTAAATTTGGTCTGAAATCTGGTCTGGTTTGAATTTATTAACTATGGTCTTTCTGGTGGTAGTTCATATTTATGACGATTGTAATATTGGTCACCAGGTTGAGATTATGCTGGATGGTTTGATATCGACTTGTTTTGCCGACATCTATTGCAGTCATGTCTGTTTTCTTCTTTTCCTTATAGCTTGGTAAAAACTTGGATAAATTCCTCTTGCATTATCATCTAGGCACAGTTGGGGGTGGCGTTTTGGTTAATCTGGTTTAGCCTTTGAACTGTTATGTGTTTGGTTTGATTTGTTTGTAAGTTGAACTTTTCAATTTAGCATTTGAAATTCTATGTATATTTATAGGCAAAAAATTTAATTTACTCAATTTTGTGCAGATGATTAATTAAGTAAAAATAACTAGAAATAAGTTGTAAAATGGGTAATCCAGTACGTAAAGGGTACTAAGAACTATGGTTAAATATGGATAGATAGTGATTATGAAATTCAATGTTAATAAAGTTTTGTTGACTTGATTTTACCTTTTGATTTAGATAAGAGAAGATCTATATCTGTCTTTTAACAAACCTTTTAGAAAGGAGTATAATTAAGTGGTCTTCTAGTGTTGCATTCTTTTGTTTGAATGATTTTGATGTGTTCATTATTATGCTTATTCATGCATTGACTATTATAGTCAAGTTCAACTTTATTCTCATATAGTTTTAAGGAAAAAAATATCATTCCCATCTAGTTCAGTTCAATGTAGTTTATCACATTCCAAGAGATTTAGTTAAACACTTGTCCTTAACATATCAAATATTGTCTGCTTAGAGAACGTCCAGGCTTTTAACTTGGAGTTTGCACTTTAGTTACTCTAAGTTGTTTATTTCATGCGGGGTGAATTGAGCTTAGTTGGAATTCTTACCGTGCATTTAGACTATCTTTCTTCACTTTTCCATTCAAGCTGTAATTAGTTAAGATTGTTCCAATTCCTCATATCTTCCTTTTTCTCCCTTGCTACATCTTCCATGGGGTTTTCTTTTCAAAATTTATAGAAACCCCCCCACCCCCCAAAAAACAAAAGCTGCTCAATATAGAACCTAAGTATCTTGTGCGTTTCTGCTGCAAACAAGTTTGACTAAAGCCTAACTTCTTAGATATTTGAATTCGAAATCGTCTAATGGACAAATTATGGATGATGGAGAAGAGAGTGTCTACGGAGTATGAATTGGGAGTGGAAGCGTCCATTCAATTTGGTTTTCGTGATGGCAAAGGTTCCGGTACTATTAGGTGTCCATGTTTGAAATCTGGGAATCATTTGTCGCTCCACTGCCGCTGGTGATAAGCTCTTGAGTTCTTGAACCAGGCCCTAATGATGAATTTTAGCTTCTATTTTGTTGTAAATTAATCTCTTCGTTTCAAGATCATCGATATATTACTCAAGGACTAATTTTGTTTGGGTAATTTATGCTAGCGGTCACGGACTAATTTTGGCATATTAACCTTGGAATCTTCCTTACATTGGCATGTAATGGATAGGTCAAACAAAGTTGTGTGAGCGGTTTTTGGTCAATGTGATCATGTTCTACATGTAATAACCTATAAGGGTAGTGACAAGATGTTTATGTTATGGAAATCGTGTTAGTTTGAGCTTACACATCTACTTTGTTGAGTTTTTACTTTCATTGTTGGTCTATTTCACAGTTTGAAGTTAGAGTTAGCTTTGATTTTTCCTTTAGGTTTGTTTACTCAAACTATTTTAGCTTTGTTTGTGTATTAATTTTTTTCTTTTTTCTTTTTTTACTTTTGGAAGATCAGTGAAAGTTGATGCTTGTTGTGACAGTTTAATAATTTGACTTTGAAGTCTTTTCTGGAGTAATATTGCGGAAGATTTCTATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGTAAGTTCATTTGGAATCAGAGTTTCTTTCTCGTTATTTCAATAATGTTTGCATTTGTCATTGATTTATTGAATCCCTTTGCCTACGTGCTAACTTGCTTATAATCCGAGCATTCTTCTTGTTGATGTTGTATACCTACAATGTTTCTTGTTCTTTTTTTTCTTTCTTGGAAACGATTAATATCTTCTACTTGACCTTGATTGATAACAATGGACGATGAAAGTACAGACATTGTGAGCTGTGTGGGCTTTTCTTCTTATTTTGATTTATGAGAACTTTTTACCATCATTTTCCGAACAAATTGACACAGTATTATGGTGTATGTGGCAGGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGTAGGTTGCATTTATTCCAATTGTATTACCTCTATTTATGCCTTTTGTCTATTAAGTTGTTAGTTTAAGCATAGCTAGGTGGACAAGACACCCATTGTCATCTCAAAAGTCAACAATTCAATTCCTCACCCACCCTATTGAGCTAAAACAAAAATATGAGTCTTGCTCCACTATTTTGGTGCTATCTACTATATTAGTTGCTGAACCAATTACCATTCAATCCAAAGGTTGATATGTTTGATCTCCCACTCTAACACCGTTGAACTAGGGAAAATAATTGTCTAGAAAATAGGTGTAAATTCTCTTTCTGGCATCATTGTCATACAGCCACTGCGTTAGTTATTTTCCATATTAGTTGCTGAACTAATTTTGTATTTGTGGCGCTATAAATGAAGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACGATTTACAAGTTGTTGGGTTTGTATTGTTCAAGAGCACATTTTGGAAAAAATAGTGAAATGTCATGTTAATTATTGCTTTGTTATCTTAATACTTCATATTAACAGGGGAAAAAAACTTTTGACAACTACATTAACCTTTTGGTATTCGTAAGGCCTTCTATTCATATTAATTTTCATCGTGCATTGGATAGATAAGTAGTAGATCAGTTTGATCATGTCTGTTCCTAATATTTTTGCTCCGTCCTCTGGAGTGGTTGTTGTTTCCATTGCGTTTTCTTATTTAGGTGTTTAGAATCACGTTGGGAAGATGTGAGGCCTCATGATCATTATATGATACACGAGTTACTTCTCTCGTATGCAATTAGCATAGAGATGGAGATATTCATGTTTATCCTATATGATATTAAATATATGAAGTCCCCTCGGGTATTTGTTCCAAAAAAGAAAAAAGAAAAATTTGACCCAAGATAGATGAACCCAAAGAGATCTTGAGAGAGAGGAGGTATGCTGAGGATCTTGCATCAGAAAAACTTACCATCATACATGAGTTACTCCGCTCATTATCAACTTATTTTTATAGGAAGTACTAAGAAGTACTTACTTTCTCACCCCTACATTCTCTTGTTTTCTGCCTTCCTCAAGTGATCGGATTCATTCTGTTCTATTTACAATCGTAGATTTACTAATTCATTTGAGACATAGTCTCAGTAAATAATGATTAAGAGGTCAAAGGTTCAATCTGTGGTGGTTACCTACGTAGAAATTATTTTATTACGAGTTTTCTCGACACTCAAATATTGTAAGGTTTGGTAGGTTGTCCTGTGAGATTAGTTGTCGTGTGCATAAGCTATGATTGACACTCATGGATATAAAAAAAACACATGGTATCATTTGAATTGAACCTAATTATAATTTCATGTATGGATTCTAATGTTCTTAATTACTTGCACATTGTGCTTTAGTTTAATGCTGTGCTTCTCAATTTGCATTCCCAACATTTGAACTCATACTCTTTCTCTTGTCTTCTTTTCCCTCTCTCCCCTCTCTTTCTAGGCCACGTAAAAATTAGGTTGATTCGAGATACAAGAACGAGAAGTCGTGAATTAGAAAAGACTAGAAGTTCATGGAAGTTGTCTTTGCCAACATGTCGGCATCATGCAGCTTCCCACACTGCAAGACTTGGCAGGAATCATTCTAACAACCATGGTCGTCGCAAACATTTTTGTTAGTTATAGATATAATAGTGTAGGCAGCGAAAGGAACATATATATTAATGGTTCGAGCTATATCAGATGATAGAGAAAATTTTGTAGTTCTCCGAACGAAGAATGTGAGAATTTTGTTAAATTACAAGTTTAGTTTTTATTTGTCTATTTGGTAAAATATAGTCTAGTCTTTGTCATGA

mRNA sequence

CACAATTTTGTCGTGTCATTATATTCTACGAAAGTGTTGAATTTCGTAGTTCTCCCTCTCTCTCGCAAAATCGCTCAAAATCCCGTCGTCGAAACGATCCTCCGGCTCCCACTGTCGATACAATCCTCCAGCCGCCGCTGTCGAAAGAATTCTCCAGCCAACGCCGTTGAAATTCGGGACGTCGCAACGCCGTCGGAATCAAGTTCGCGCCATCTCTGTTCGTCGTCTTCCGCCGTCCAGTGCTTCTCCTTGCTCCCTCCTCTGTCCGTCTTTTCTGGAGTAATATTGCGGAAGATTTCTATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGCCACGTAAAAATTAGGTTGATTCGAGATACAAGAACGAGAAGTCGTGAATTAGAAAAGACTAGAAGTTCATGGAAGTTGTCTTTGCCAACATGTCGGCATCATGCAGCTTCCCACACTGCAAGACTTGGCAGGAATCATTCTAACAACCATGGTCGTCGCAAACATTTTTGTTAGTTATAGATATAATAGTGTAGGCAGCGAAAGGAACATATATATTAATGGTTCGAGCTATATCAGATGATAGAGAAAATTTTGTAGTTCTCCGAACGAAGAATGTGAGAATTTTGTTAAATTACAAGTTTAGTTTTTATTTGTCTATTTGGTAAAATATAGTCTAGTCTTTGTCATGA

Coding sequence (CDS)

CACAATTTTGTCGTGTCATTATATTCTACGAAAGTGTTGAATTTCGTAGTTCTCCCTCTCTCTCGCAAAATCGCTCAAAATCCCGTCGTCGAAACGATCCTCCGGCTCCCACTGTCGATACAATCCTCCAGCCGCCGCTGTCGAAAGAATTCTCCAGCCAACGCCGTTGAAATTCGGGACGTCGCAACGCCGTCGGAATCAAGTTCGCGCCATCTCTGTTCGTCGTCTTCCGCCGTCCAGTGCTTCTCCTTGCTCCCTCCTCTGTCCGTCTTTTCTGGAGTAATATTGCGGAAGATTTCTATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGCCACGTAAAAATTAG

Protein sequence

HNFVVSLYSTKVLNFVVLPLSRKIAQNPVVETILRLPLSIQSSSRRCRKNSPANAVEIRDVATPSESSSRHLCSSSSAVQCFSLLPPLSVFSGVILRKISMEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGKRPRKN
Homology
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BLAST of MELO3C015565.2 vs. NCBI nr
Match: XP_008450999.1 (PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo])

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-59
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 101 MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 160
           MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 161 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 220
           IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 221 RPRKN 226
           RPRKN
Sbjct: 121 RPRKN 125

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BLAST of MELO3C015565.2 vs. NCBI nr
Match: KGN53850.1 (hypothetical protein Csa_4G166940 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 3.4e-58
Identity = 134/171 (78.36%), Postives = 142/171 (83.04%), Query Frame = 0 

Query: 62  ATPSESSSRHLCSSSSAVQ----CFSLL----PPLSVFSGVILRKISMEEANEILKNNRV 121
           A PS   +   C  SS  +    C SL+        VFSGVILRKISMEEANEILKN R+
Sbjct: 133 ALPSAVKTNQECCRSSPSRTIHHCGSLISRCTTAAGVFSGVILRKISMEEANEILKNKRI 192

Query: 122 EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGFVLMEHLKGEL 181
           E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RAIGFVLMEHLKGEL
Sbjct: 193 EGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGEL 252

Query: 182 RTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGKRPRK 225
           RTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGKRP++
Sbjct: 253 RTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGKRPQE 302

[Close]
BLAST of MELO3C015565.2 vs. NCBI nr
Match: KGN58374.1 (hypothetical protein Csa_3G633280 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 9.8e-58
Identity = 135/181 (74.59%), Postives = 148/181 (81.77%), Query Frame = 0 

Query: 51  SPANAVEIRDVATPSESSSRHLCSSSSAVQCFSLLPPLS-------VFSGVILRKISMEE 110
           +P +AV + ++     +SS HL  +S+         P S       VFSGVILRKISMEE
Sbjct: 3   APPSAV-LANLKVEVSTSSSHLSFASNFSHQPRAASPTSAPSATVRVFSGVILRKISMEE 62

Query: 111 ANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGF 170
           ANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGF
Sbjct: 63  ANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGF 122

Query: 171 VLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGKRPR 225
           VLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGKR R
Sbjct: 123 VLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKRSR 181

[Close]
BLAST of MELO3C015565.2 vs. NCBI nr
Match: XP_008460383.1 (PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460384.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460385.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460387.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460388.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460389.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460390.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_016902549.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 7.2e-53
Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 101 MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 160
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLR 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 161 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 220
           IGFVLMEHLKGELRTSDV+DLSQSA LNACNLLDSN+EK L IDEIM SIC DRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSA-LNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGK 120

Query: 221 RPRK 225
           RPR+
Sbjct: 121 RPRE 123

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BLAST of MELO3C015565.2 vs. NCBI nr
Match: XP_011653427.1 (PREDICTED: uncharacterized protein LOC105435221 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 101 MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 160
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60

Query: 161 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 220
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 221 RPRK 225
           RP++
Sbjct: 121 RPQE 123

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BLAST of MELO3C015565.2 vs. TAIR10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 63/127 (49.61%), Postives = 89/127 (70.08%), Query Frame = 0 

Query: 101 MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 160
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 161 IGFVLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKK 220
           +G VLMEH +  ++       S + Q   L+ CNLL ++V+  + I+EI+  IC ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 221 PGKRPRK 225
             ++ R+
Sbjct: 121 KARKRRR 127

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BLAST of MELO3C015565.2 vs. TAIR10
Match: AT4G00695.3 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 111.7 bits (278), Expect = 6.0e-25
Identity = 63/127 (49.61%), Postives = 90/127 (70.87%), Query Frame = 0 

Query: 101 MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLKTLR 160
           MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 161 AIGFVLMEHLKGELRTSDVSDLSQS-----ATLNACNLLDSNVEKILSIDEIMASICSDR 220
           ++G VLME+++   R  D + L+ S     + L++CNLL ++V+  + I+EI+  IC+  
Sbjct: 61  SLGLVLMEYVR--KRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKN 120

Query: 221 RKKPGKR 222
               G R
Sbjct: 121 WATKGTR 125

[Close]
BLAST of MELO3C015565.2 vs. TrEMBL
Match: tr|A0A1S3BQH9|A0A1S3BQH9_CUCME (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.9e-60
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 101 MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 160
           MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 161 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 220
           IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 221 RPRKN 226
           RPRKN
Sbjct: 121 RPRKN 125

[Close]
BLAST of MELO3C015565.2 vs. TrEMBL
Match: tr|A0A0A0KW48|A0A0A0KW48_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 134/171 (78.36%), Postives = 142/171 (83.04%), Query Frame = 0 

Query: 62  ATPSESSSRHLCSSSSAVQ----CFSLL----PPLSVFSGVILRKISMEEANEILKNNRV 121
           A PS   +   C  SS  +    C SL+        VFSGVILRKISMEEANEILKN R+
Sbjct: 133 ALPSAVKTNQECCRSSPSRTIHHCGSLISRCTTAAGVFSGVILRKISMEEANEILKNKRI 192

Query: 122 EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGFVLMEHLKGEL 181
           E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RAIGFVLMEHLKGEL
Sbjct: 193 EGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGEL 252

Query: 182 RTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGKRPRK 225
           RTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGKRP++
Sbjct: 253 RTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGKRPQE 302

[Close]
BLAST of MELO3C015565.2 vs. TrEMBL
Match: tr|A0A0A0LBP9|A0A0A0LBP9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.5e-58
Identity = 135/181 (74.59%), Postives = 148/181 (81.77%), Query Frame = 0 

Query: 51  SPANAVEIRDVATPSESSSRHLCSSSSAVQCFSLLPPLS-------VFSGVILRKISMEE 110
           +P +AV + ++     +SS HL  +S+         P S       VFSGVILRKISMEE
Sbjct: 3   APPSAV-LANLKVEVSTSSSHLSFASNFSHQPRAASPTSAPSATVRVFSGVILRKISMEE 62

Query: 111 ANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGF 170
           ANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGF
Sbjct: 63  ANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGF 122

Query: 171 VLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGKRPR 225
           VLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGKR R
Sbjct: 123 VLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKRSR 181

[Close]
BLAST of MELO3C015565.2 vs. TrEMBL
Match: tr|A0A1S3CBX7|A0A1S3CBX7_CUCME (uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.8e-53
Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0 

Query: 101 MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 160
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLR 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 161 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 220
           IGFVLMEHLKGELRTSDV+DLSQSA LNACNLLDSN+EK L IDEIM SIC DRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSA-LNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGK 120

Query: 221 RPRK 225
           RPR+
Sbjct: 121 RPRE 123

[Close]
BLAST of MELO3C015565.2 vs. TrEMBL
Match: tr|A0A1Q3CGD2|A0A1Q3CGD2_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22775 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.6e-27
Identity = 70/127 (55.12%), Postives = 98/127 (77.17%), Query Frame = 0 

Query: 97  RKISMEEANEIL-KNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL 156
           +++ M +  EIL  NN +ED+SWLCSLSESELD+LIS+K+LVLQRAK +GH+ L +KFDL
Sbjct: 13  KRLGMGDKEEILGSNNGIEDVSWLCSLSESELDMLISLKVLVLQRAKIVGHDELVKKFDL 72

Query: 157 KTLRAIGFVLMEHLKGELR-TSDVSDLSQSATL-NACNLLDSNVEKILSIDEIMASICSD 216
           K LRA+GFVLM+++KG+++  S  S L++SATL + CNLL S +E I S++E+ A I +D
Sbjct: 73  KMLRALGFVLMQYVKGQVKDLSLASSLAKSATLIDNCNLLKSELENITSVEELKACISTD 132

Query: 217 RRKKPGK 221
            R +  K
Sbjct: 133 SRNRSAK 139

The following BLAST results are available for this feature:
BLAST of MELO3C015565.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450999.11.0e-59100.00PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo][more]
KGN53850.13.4e-5878.36hypothetical protein Csa_4G166940 [Cucumis sativus][more]
KGN58374.19.8e-5874.59hypothetical protein Csa_3G633280 [Cucumis sativus][more]
XP_008460383.17.2e-5391.94PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460384.1 P... [more]
XP_011653427.11.2e-5291.94PREDICTED: uncharacterized protein LOC105435221 [Cucumis sativus][more]
BLAST of MELO3C015565.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80245.11.2e-2849.61Spc97 / Spc98 family of spindle pole body (SBP) component[more]
AT4G00695.36.0e-2549.61FUNCTIONS IN: molecular_function unknown[more]
BLAST of MELO3C015565.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C015565.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQH9|A0A1S3BQH9_CUCME6.9e-60100.00uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=... [more]
tr|A0A0A0KW48|A0A0A0KW48_CUCSA2.2e-5878.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=4 SV=1[more]
tr|A0A0A0LBP9|A0A0A0LBP9_CUCSA6.5e-5874.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1[more]
tr|A0A1S3CBX7|A0A1S3CBX7_CUCME4.8e-5391.94uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=... [more]
tr|A0A1Q3CGD2|A0A1Q3CGD2_CEPFO1.6e-2755.12Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22775 PE=4... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0007020 microtubule nucleation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0005874 microtubule
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0000922 spindle pole
molecular_function GO:0043015 gamma-tubulin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015565.2.1MELO3C015565.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015565.2Cucumber (Gy14) v2cgybmedB032
MELO3C015565.2Cucumber (Gy14) v1cgymedB235
MELO3C015565.2Cucurbita maxima (Rimu)cmamedB061
MELO3C015565.2Cucurbita maxima (Rimu)cmamedB111
MELO3C015565.2Cucurbita moschata (Rifu)cmomedB053
MELO3C015565.2Cucurbita moschata (Rifu)cmomedB104
MELO3C015565.2Cucurbita pepo (Zucchini)cpemedB393
MELO3C015565.2Cucurbita pepo (Zucchini)cpemedB733
MELO3C015565.2Wild cucumber (PI 183967)cpimedB036
MELO3C015565.2Cucumber (Chinese Long) v2cumedB033
MELO3C015565.2Bottle gourd (USVL1VR-Ls)lsimedB418
MELO3C015565.2Watermelon (Charleston Gray)medwcgB237
MELO3C015565.2Watermelon (97103) v1medwmB262
MELO3C015565.2Silver-seed gourdcarmedB0098
MELO3C015565.2Silver-seed gourdcarmedB0509
MELO3C015565.2Cucumber (Chinese Long) v3cucmedB039
MELO3C015565.2Watermelon (97103) v2medwmbB235
MELO3C015565.2Wax gourdmedwgoB303