MELO3C015440 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015440
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionOxidoreductase/transition metal ion-binding protein
Locationchr2 : 1672323 .. 1675621 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAACACTGTAGTAAAGAAATTTGAACACTAAGCTTGTTAAAAAGATCATTTCCAATTGTTTCGAACTCCCCTTTCTTTCCAGATTTGAAGAAGATTTGATCTTTTAATCTTTCATCGCTCAAGGTTTTCTTCAAGCTCCGCAGACACAGAAATGATTGTCTTGCAATTCCACCACTCCATTCTCTCGCCGATTCGTCTTCCCATCACAACAATTGGCGCTAAAATTTCCCTCCCAACCAACTATTTCTTGCCCCCATACACCCTCTCTAAACCCCTTCACCGGAATTTTCTATCCAGTGCTGCCCGTGACAAAAAATCGGAAATTTACAACATCCCCTCCACTGAAATCGAGGTGGTGGATGAAGAACGTGAAGATTATGATGATGGGGACGACAGATTTTGGAGTGAGAGTGGATTTAGAGGAAGAGAAGAAGAAAAGGACTATGATCGAGACCCTGAATTCGCTGAAATTATCGGAACTAGTCTTGATGATCCAGAGAAAGCTCGGTCCAAAGTATAACTTTCTCATCTCTTCCTCGTCAACCGCTTTTTCATGTTTGTTTTTTCTATTATCCCATTGTGGGTTTATCGGCGAAGTAATTAGTGGACATTTTATACTTCAATTTCTTGCTACTGCTTAATGGGAATAATCTCTTCTTGGGTCATTTGTTTATGTATTTTGTTTGTTTTATGAGTGTAAATAATATGGTGGCTTAAGTTGATATGTCTAGATAAACATGTATTGTTGTTTATTAGAAGCGTTCTTGTTTTTGGCTTTTGGTGTTTAACCTGTAAGAGGTACATACTGCAGATGGAAGAGAGGCTGAGGAAGAAAAGAAACAAGATACTCCAGCCAAAGACGGGATCAGCTGTTCCAGTAAAAGTTACATTCAACAAGTAAGATTAGTTTTAGTGAATAGATGGATTGTCAACCTTTTCATTTTATTGAATTAACCATGCTCTTGCTTTTCCATCGAACATTTATTTTGGATTTCAATCATTTTTCAAACAAAAATGTTTAGATATTTTCCATTTTAATATGAGATTAAATAACTTCTGGTCCTGAAGTTTCTAACTTGGAAAAAATGACTTGGGGTGTGTTACTCGAATCATTGATCCGGTACCAGATGTAGCTTTTCTCTAGGCAAAATGCCTAATATTTACAACACTTTGATAGTTAAAGGTCAATAGATCAATATACTGACAGTCGAGAAATTAATGTGACTTGTAATCTATGGATGAATGCATTTGATTTGGCTATGTCTGAGGCAGTAAAACAGAGAACCCCAATGTTGGACTATCTATACAGCCACAATTTCATAAATGCATATTGTTTCTCCTTGGTTTCCACTAGAGTTGGGATCTAAGTTCTAATTTAGGAAGAATTTCCATAGCCAACAAGCATATAATTTATGTGTAGCAACTGCACTACAAATAGTTTTTGTATATTTCTGATAACTGAGAATTTTATTGCTTTTTATATGCTGAAGCCTGAGTGTATGAACAGTTAGAATACAAGCATATTTCCTAGTTATATTCCTATGTCCTTAGCATCCATTCTCTCCTTAATCTCTAAAACATATTCAGCTGAGAATAAGAAAACTTGTTACTTTTTTGTGTGAGTCTTTTCTTTCTTCTCTATAATTTATGTGAATTCTCTGTTGAATGTGTATCTTCTGGCTTAATTATGCATTGAATTCTCTCCATTCTGTTACGTATATTCTCTCTTTAGTTTGGAATTGGACATATGAGTTGTCAATGTTTCTTCCAGGTTCGATTTCTCAAATTCATATATATGGTTTGAATTCTACAACACTCCACTGGCAAAAGATATCACCTTAATTTGTGATGTAAGTTTTTGTTTCTGTTATCTTAGCTTCTGCCTAAAAAACTTCAATGAATTAGATTTATGATCTTTGTTCACAGACCATAAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGGTAAACTTCAATTTCACTATTATTTCACGTTGTTATAGGATTTGCATAATTTTGTTTGAAAAATTAGCCTTCAGCAAACTTTATGAATCATATTCACTGCCGTTGTTCATTTAAGTTAATCTCTACAGCTGTCTCAATCTCCTTTGGATAAACGACCGAGTTATGATGCTATTCAGGGAGCTAATGTTACTCCAACCACATTTTATAACATTGGGGATTTTGAGGTTCAAGACAACTTGGCTCGCATATGGTAATATCTCTCAATCTAATTTTCTTGATGTTCCTGTCATTTTCATAACATTTACGGAGGTGTTCGTGATACCAGGAAAGACCTTAAGATGTCAGCGTTCACTTTTTTTTTTTCTCATTTATCGACTTTTCTTTATACACAGGGTTGATATTGGGACCAGCGAACCTTTGCTTCTAGATGTTTTGATAAATGCATTAACCCAGATAAGCTCTGAGTAAGTTCCTACTACACTTCTTACCAATGTTTTCTTGCCCAAATTTAATTTCCTTTAAAGTACTTTTGCTCATCTGCTGCCTGTGAAGTGTGTAACAGAATCACTAGATTTTTGCCCTTTTAGAGCTTTTAGAGCATGTTGGAGAGTGATTGTGAAATTGTCAAAATTGTCGTATAATCACTTCGAATCACACCAGTAACCAGTAAAAAATAATTTAATATTTAATTTTACACTTACAAGTGCAATTTTCATGTCATCAAAAGTAGTTTTGAATGATTAAGAACATGTTTCAAAGTGTTTTTCAAAATAAAAGTAATTTTAACCATTTCAGAATCACTCTCCTAGATGCCCTCACACAAATCAACTCTTTTGGTATGGTTTTGCATTTCTTCTAATGCTCATGCACTCTCTTATACTCATACGAGCTCTTTATGGATATTGGGTTTAATATTTACGTTTCTAATGTTACTGATAATAGTTTTATGTGCCACTAAAATTTTCACAAAACAGCTATGTTGGAATCAAACAATTGGTATTTGGGGGATCTGAGTTTGAGAATTGGAAAGAGGATTTGACAACTGAAGATGCTGGTTACAGCACTCACAAGATATAGCTACTTCCTTTGGAGAATAGATGTGGGAAGATATTGTTGAAGGTAATAATACAAGATGATGAATAAACTGATATTATACGGGAATTTTGTGCCTGTGTTTTTCAAGAATGGAAAATGGATCATCTCATTGTTAGCCAGTCTCTAGGAGAGTAGTAAGAAGGTTTTTTTTTGGTAGCAAATTTGTAGCAATGTATGAGAAAACTTGACCCAAGTATTGTATATTATACCTTTTAG

mRNA sequence

ATAAACACTGTAGTAAAGAAATTTGAACACTAAGCTTGTTAAAAAGATCATTTCCAATTGTTTCGAACTCCCCTTTCTTTCCAGATTTGAAGAAGATTTGATCTTTTAATCTTTCATCGCTCAAGGTTTTCTTCAAGCTCCGCAGACACAGAAATGATTGTCTTGCAATTCCACCACTCCATTCTCTCGCCGATTCGTCTTCCCATCACAACAATTGGCGCTAAAATTTCCCTCCCAACCAACTATTTCTTGCCCCCATACACCCTCTCTAAACCCCTTCACCGGAATTTTCTATCCAGTGCTGCCCGTGACAAAAAATCGGAAATTTACAACATCCCCTCCACTGAAATCGAGGTGGTGGATGAAGAACGTGAAGATTATGATGATGGGGACGACAGATTTTGGAGTGAGAGTGGATTTAGAGGAAGAGAAGAAGAAAAGGACTATGATCGAGACCCTGAATTCGCTGAAATTATCGGAACTAGTCTTGATGATCCAGAGAAAGCTCGGTCCAAAATGGAAGAGAGGCTGAGGAAGAAAAGAAACAAGATACTCCAGCCAAAGACGGGATCAGCTGTTCCAGTAAAAGTTACATTCAACAAGTTCGATTTCTCAAATTCATATATATGGTTTGAATTCTACAACACTCCACTGGCAAAAGATATCACCTTAATTTGTGATACCATAAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGCTGTCTCAATCTCCTTTGGATAAACGACCGAGTTATGATGCTATTCAGGGAGCTAATGTTACTCCAACCACATTTTATAACATTGGGGATTTTGAGGTTCAAGACAACTTGGCTCGCATATGGGTTGATATTGGGACCAGCGAACCTTTGCTTCTAGATGTTTTGATAAATGCATTAACCCAGATAAGCTCTGACTATGTTGGAATCAAACAATTGGTATTTGGGGGATCTGAGTTTGAGAATTGGAAAGAGGATTTGACAACTGAAGATGCTGGTTACAGCACTCACAAGATATAGCTACTTCCTTTGGAGAATAGATGTGGGAAGATATTGTTGAAGGTAATAATACAAGATGATGAATAAACTGATATTATACGGGAATTTTGTGCCTGTGTTTTTCAAGAATGGAAAATGGATCATCTCATTGTTAGCCAGTCTCTAGGAGAGTAGTAAGAAGGTTTTTTTTTGGTAGCAAATTTGTAGCAATGTATGAGAAAACTTGACCCAAGTATTGTATATTATACCTTTTAG

Coding sequence (CDS)

ATGATTGTCTTGCAATTCCACCACTCCATTCTCTCGCCGATTCGTCTTCCCATCACAACAATTGGCGCTAAAATTTCCCTCCCAACCAACTATTTCTTGCCCCCATACACCCTCTCTAAACCCCTTCACCGGAATTTTCTATCCAGTGCTGCCCGTGACAAAAAATCGGAAATTTACAACATCCCCTCCACTGAAATCGAGGTGGTGGATGAAGAACGTGAAGATTATGATGATGGGGACGACAGATTTTGGAGTGAGAGTGGATTTAGAGGAAGAGAAGAAGAAAAGGACTATGATCGAGACCCTGAATTCGCTGAAATTATCGGAACTAGTCTTGATGATCCAGAGAAAGCTCGGTCCAAAATGGAAGAGAGGCTGAGGAAGAAAAGAAACAAGATACTCCAGCCAAAGACGGGATCAGCTGTTCCAGTAAAAGTTACATTCAACAAGTTCGATTTCTCAAATTCATATATATGGTTTGAATTCTACAACACTCCACTGGCAAAAGATATCACCTTAATTTGTGATACCATAAGGTCATGGCACATCATTGGACGTCTTGGTGGATGCAATTCCATGAATATGCAGCTGTCTCAATCTCCTTTGGATAAACGACCGAGTTATGATGCTATTCAGGGAGCTAATGTTACTCCAACCACATTTTATAACATTGGGGATTTTGAGGTTCAAGACAACTTGGCTCGCATATGGGTTGATATTGGGACCAGCGAACCTTTGCTTCTAGATGTTTTGATAAATGCATTAACCCAGATAAGCTCTGACTATGTTGGAATCAAACAATTGGTATTTGGGGGATCTGAGTTTGAGAATTGGAAAGAGGATTTGACAACTGAAGATGCTGGTTACAGCACTCACAAGATATAG

Protein sequence

MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYNIPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI*
Homology
[Close]
BLAST of MELO3C015440 vs. TrEMBL
Match: A0A0A0LZB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G580220 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 2.2e-161
Identity = 281/294 (95.58%), Postives = 285/294 (96.94%), Query Frame = 1 

Query: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN 60
           M+VLQFHHSI  PIRLPITTIGAKISLPTN+ LPPYTLSKPLHRNFLS A RD+KSEIYN
Sbjct: 1   MVVLQFHHSIFLPIRLPITTIGAKISLPTNHLLPPYTLSKPLHRNFLSRATRDQKSEIYN 60

Query: 61  IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS 120
           IPSTEIEVVDEE EDYDDGDDRFWSESGFRGRE EKDYDRDPEFAEIIGTSLDDP+KARS
Sbjct: 61  IPSTEIEVVDEEGEDYDDGDDRFWSESGFRGREGEKDYDRDPEFAEIIGTSLDDPDKARS 120

Query: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180
           KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS
Sbjct: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180

Query: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI 240
           WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANV PTTFYNIGDFEVQDNLARIWVDI
Sbjct: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVNPTTFYNIGDFEVQDNLARIWVDI 240

Query: 241 GTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           GTSEPLLLDVLINAL QISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI
Sbjct: 241 GTSEPLLLDVLINALIQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 294

[Close]
BLAST of MELO3C015440 vs. TrEMBL
Match: A0A0B0NCN4_GOSAR (Dna-directed rna polymerase i subunit rpa2 OS=Gossypium arboreum GN=F383_09136 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.3e-109
Identity = 204/291 (70.10%), Postives = 233/291 (80.07%), Query Frame = 1 

Query: 4   LQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYNIPS 63
           + FH +I  P          K +L ++Y  P          +F    A+ ++ +I + P 
Sbjct: 21  ISFHFNIFPPFST------VKFALRSHYASPK--------ASFSMLKAKRREEDISSQPF 80

Query: 64  TEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARSKME 123
            +IE+ DE    YDD ++ + + SGFRGREEEK+YD+DPEFAEI+G+ LDDPEKARSKME
Sbjct: 81  -DIEMDDE----YDDDNEGYEARSGFRGREEEKNYDKDPEFAEILGSCLDDPEKARSKME 140

Query: 124 ERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHI 183
           +RLRKKRNKIL  KTGS  P+KVTFNKFDFSNSYIWFEFYNTPL KDI+LICDTIRSWHI
Sbjct: 141 DRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDISLICDTIRSWHI 200

Query: 184 IGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTS 243
           IGRLGGCNSMNMQLSQSPL+KRPSYDAIQGANV PTTFYNIGD EVQDNLARIWVDIGT+
Sbjct: 201 IGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQDNLARIWVDIGTT 260

Query: 244 EPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           EPL+LDVLINALTQISSDY+GIKQLVFGGSE ENWKE LTTEDAGYS H+I
Sbjct: 261 EPLILDVLINALTQISSDYIGIKQLVFGGSELENWKESLTTEDAGYSVHRI 292

[Close]
BLAST of MELO3C015440 vs. TrEMBL
Match: A0A0D2S7D3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G283500 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 8.2e-108
Identity = 202/291 (69.42%), Postives = 231/291 (79.38%), Query Frame = 1 

Query: 4   LQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYNIPS 63
           + FH +I  P          K +L ++Y  P          +F    A+ ++ +I + P 
Sbjct: 21  ISFHFNIFPPFST------VKFALRSHYASPK--------TSFSMLKAKRREEDISSQPF 80

Query: 64  TEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARSKME 123
            +IE+ D    DY D ++ + + SGFRGREEEK+YD+DPEFAEI+G+ LDDPEKARSKME
Sbjct: 81  -DIEMDD----DYGDDNEGYEASSGFRGREEEKNYDKDPEFAEILGSCLDDPEKARSKME 140

Query: 124 ERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHI 183
           +RLRKKRNKIL  KTGS  P+KVTFNKFDFSNSYIWFEFYNTPL KDI+LICDTIRSWHI
Sbjct: 141 DRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDISLICDTIRSWHI 200

Query: 184 IGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTS 243
           IGRLGGCNSMNMQLSQSPL+KRPSYDAIQGANV PTTFYNIGD EVQDNLARIWVDIGT+
Sbjct: 201 IGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQDNLARIWVDIGTT 260

Query: 244 EPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           EPL+LDVLINALTQISSDY+ IKQLVFGGSE ENWKE LTTEDAGYS H+I
Sbjct: 261 EPLILDVLINALTQISSDYIAIKQLVFGGSELENWKESLTTEDAGYSVHRI 292

[Close]
BLAST of MELO3C015440 vs. TrEMBL
Match: W9QJT8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027234 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-107
Identity = 187/228 (82.02%), Postives = 211/228 (92.54%), Query Frame = 1 

Query: 71  EEREDYDD----GDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARSKMEERL 130
           EE + YDD    G+D F +  GFRGR++EKDYD+DPEFA+I+GT LDDPEKAR+KMEERL
Sbjct: 62  EEGDYYDDEDDGGEDGFSTRGGFRGRDDEKDYDKDPEFAQILGTCLDDPEKARAKMEERL 121

Query: 131 RKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHIIGR 190
           R+KRN+IL  KTGSA P+KVTFNKFDFSNSYIWFEFYNTPL KD++L+CDTIRSWHIIGR
Sbjct: 122 RRKRNRILHSKTGSATPMKVTFNKFDFSNSYIWFEFYNTPLDKDVSLLCDTIRSWHIIGR 181

Query: 191 LGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTSEPL 250
           LGGCNSMNMQLSQSPLDKRPSYDAIQGANVTP+TFYN+GD E+Q+NLARIWVDIGTSEPL
Sbjct: 182 LGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPSTFYNLGDLEIQENLARIWVDIGTSEPL 241

Query: 251 LLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           LLDVLINALTQISSD+VG+KQ+VFGG+EFENWKE+LTTEDAGYS HKI
Sbjct: 242 LLDVLINALTQISSDFVGVKQVVFGGAEFENWKENLTTEDAGYSVHKI 289

[Close]
BLAST of MELO3C015440 vs. TrEMBL
Match: A0A061GKX7_THECC (Ribonuclease P protein component 3 OS=Theobroma cacao GN=TCM_037715 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 3.5e-106
Identity = 193/242 (79.75%), Postives = 214/242 (88.43%), Query Frame = 1 

Query: 54  KKSEIYNIPSTEIEVVDEE-REDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSL 113
           K+S   +  + EIE+ +EE  E+Y+       + SGFRGREEEK+YD+DPEFAEI+G+ L
Sbjct: 41  KRSHEMSAQNLEIEMDEEEDNEEYE-------ARSGFRGREEEKNYDKDPEFAEILGSCL 100

Query: 114 DDPEKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDIT 173
           DDP+KARSKME+RLRKKRNKIL  KTGSA P+KVTFNKFDFSNSYIWFEFYN PL KDI+
Sbjct: 101 DDPQKARSKMEDRLRKKRNKILHTKTGSATPMKVTFNKFDFSNSYIWFEFYNAPLEKDIS 160

Query: 174 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDN 233
           LICDTIRSWHIIGRLGGCNSMNMQLSQSPL+KRPSYDAIQGANV  TTFYNIGD EVQDN
Sbjct: 161 LICDTIRSWHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNATTFYNIGDLEVQDN 220

Query: 234 LARIWVDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTH 293
           +ARIWVDIGT+EPLLLDVLINALTQISSDYVGI QLVFGGSEFENWKEDLTTEDAGY+ H
Sbjct: 221 VARIWVDIGTTEPLLLDVLINALTQISSDYVGIMQLVFGGSEFENWKEDLTTEDAGYTVH 275

Query: 294 KI 295
           +I
Sbjct: 281 RI 275

[Close]
BLAST of MELO3C015440 vs. TAIR10
Match: AT4G29400.1 (AT4G29400.1 Protein of unknown function (DUF3531))

HSP 1 Score: 344.4 bits (882), Expect = 7.2e-95
Identity = 168/237 (70.89%), Postives = 199/237 (83.97%), Query Frame = 1 

Query: 65  EIEVVDEEREDYDDGDD-----RFWSESG--FRGREEEKDYDRDPEFAEIIGTSLDDPEK 124
           E+E   EE E+ DDGDD      F ++    +R ++E+ DYD+DPEFA+I+G  LD+P+K
Sbjct: 66  EMEEGVEEFEEVDDGDDDEVEDEFSAKKRGVYRAKKEKIDYDKDPEFADILGDCLDNPDK 125

Query: 125 ARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDT 184
           A+ KMEERLRKKRNKIL  KTGSA  + VTFNKF++SNSY+W EFYNTPL KDI LI DT
Sbjct: 126 AQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWLEFYNTPLDKDIALISDT 185

Query: 185 IRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIW 244
           IRSWHI+GRLGG NSMNMQLSQ+PLDKRP+YDAI GANV PTTFYNIGD EVQDN+ARIW
Sbjct: 186 IRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTTFYNIGDLEVQDNVARIW 245

Query: 245 VDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           +DIGTSEPL+LDVLINALTQISSDYVGIK++VFGGSEFE+WKE++T+E++G+  HKI
Sbjct: 246 LDIGTSEPLILDVLINALTQISSDYVGIKKVVFGGSEFESWKENMTSEESGFRVHKI 302

[Close]
BLAST of MELO3C015440 vs. TAIR10
Match: AT5G08400.1 (AT5G08400.1 Protein of unknown function (DUF3531))

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-49
Identity = 90/194 (46.39%), Postives = 129/194 (66.49%), Query Frame = 1 

Query: 101 DPEFAEIIGTSLDDPEKARSKMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWF 160
           D E   ++G S+ +PE  R K+EER+RKK     + KTGS +  KV F  F+  +S+IWF
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 199

Query: 161 EFYNTPLAKDITLICDTIRSWHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTT 220
           E Y TP  +D+ LI   I++W+++GRLG  N+ N+QL+ + L+  P YDA +G  V P++
Sbjct: 200 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 259

Query: 221 FYNIGDFEVQDNLARIWVDIGTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKE 280
           F++I D E QDN  R+WVD+GTS+   LDVL+N LT +SS+Y+GI+Q+VFGG    +W+E
Sbjct: 260 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEE 319

Query: 281 DLTTEDAGYSTHKI 295
            +T  D GY   KI
Sbjct: 320 GMTNPDFGYKYFKI 333

[Close]
BLAST of MELO3C015440 vs. NCBI nr
Match: gi|659099880|ref|XP_008450822.1| (PREDICTED: uncharacterized protein LOC103492292 isoform X2 [Cucumis melo])

HSP 1 Score: 600.5 bits (1547), Expect = 1.6e-168
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 

Query: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN 60
           MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN
Sbjct: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN 60

Query: 61  IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS 120
           IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS
Sbjct: 61  IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS 120

Query: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180
           KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS
Sbjct: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180

Query: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI 240
           WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI
Sbjct: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI 240

Query: 241 GTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           GTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI
Sbjct: 241 GTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 294

[Close]
BLAST of MELO3C015440 vs. NCBI nr
Match: gi|449435820|ref|XP_004135692.1| (PREDICTED: uncharacterized protein LOC101205319 [Cucumis sativus])

HSP 1 Score: 576.2 bits (1484), Expect = 3.2e-161
Identity = 281/294 (95.58%), Postives = 285/294 (96.94%), Query Frame = 1 

Query: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN 60
           M+VLQFHHSI  PIRLPITTIGAKISLPTN+ LPPYTLSKPLHRNFLS A RD+KSEIYN
Sbjct: 1   MVVLQFHHSIFLPIRLPITTIGAKISLPTNHLLPPYTLSKPLHRNFLSRATRDQKSEIYN 60

Query: 61  IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS 120
           IPSTEIEVVDEE EDYDDGDDRFWSESGFRGRE EKDYDRDPEFAEIIGTSLDDP+KARS
Sbjct: 61  IPSTEIEVVDEEGEDYDDGDDRFWSESGFRGREGEKDYDRDPEFAEIIGTSLDDPDKARS 120

Query: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180
           KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS
Sbjct: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180

Query: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI 240
           WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANV PTTFYNIGDFEVQDNLARIWVDI
Sbjct: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVNPTTFYNIGDFEVQDNLARIWVDI 240

Query: 241 GTSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           GTSEPLLLDVLINAL QISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI
Sbjct: 241 GTSEPLLLDVLINALIQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 294

[Close]
BLAST of MELO3C015440 vs. NCBI nr
Match: gi|659099878|ref|XP_008450821.1| (PREDICTED: uncharacterized protein LOC103492292 isoform X1 [Cucumis melo])

HSP 1 Score: 531.2 bits (1367), Expect = 1.2e-147
Identity = 260/263 (98.86%), Postives = 262/263 (99.62%), Query Frame = 1 

Query: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN 60
           MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN
Sbjct: 1   MIVLQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYN 60

Query: 61  IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS 120
           IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS
Sbjct: 61  IPSTEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARS 120

Query: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180
           KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS
Sbjct: 121 KMEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRS 180

Query: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI 240
           WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI
Sbjct: 181 WHIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDI 240

Query: 241 GTSEPLLLDVLINALTQISSDYV 264
           GTSEPLLLDVLINALTQISS+ +
Sbjct: 241 GTSEPLLLDVLINALTQISSELI 263

[Close]
BLAST of MELO3C015440 vs. NCBI nr
Match: gi|728830994|gb|KHG10437.1| (dna-directed rna polymerase i subunit rpa2 [Gossypium arboreum])

HSP 1 Score: 402.9 bits (1034), Expect = 4.8e-109
Identity = 204/291 (70.10%), Postives = 233/291 (80.07%), Query Frame = 1 

Query: 4   LQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYNIPS 63
           + FH +I  P          K +L ++Y  P          +F    A+ ++ +I + P 
Sbjct: 21  ISFHFNIFPPFST------VKFALRSHYASPK--------ASFSMLKAKRREEDISSQPF 80

Query: 64  TEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARSKME 123
            +IE+ DE    YDD ++ + + SGFRGREEEK+YD+DPEFAEI+G+ LDDPEKARSKME
Sbjct: 81  -DIEMDDE----YDDDNEGYEARSGFRGREEEKNYDKDPEFAEILGSCLDDPEKARSKME 140

Query: 124 ERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHI 183
           +RLRKKRNKIL  KTGS  P+KVTFNKFDFSNSYIWFEFYNTPL KDI+LICDTIRSWHI
Sbjct: 141 DRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDISLICDTIRSWHI 200

Query: 184 IGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTS 243
           IGRLGGCNSMNMQLSQSPL+KRPSYDAIQGANV PTTFYNIGD EVQDNLARIWVDIGT+
Sbjct: 201 IGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQDNLARIWVDIGTT 260

Query: 244 EPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           EPL+LDVLINALTQISSDY+GIKQLVFGGSE ENWKE LTTEDAGYS H+I
Sbjct: 261 EPLILDVLINALTQISSDYIGIKQLVFGGSELENWKESLTTEDAGYSVHRI 292

[Close]
BLAST of MELO3C015440 vs. NCBI nr
Match: gi|823154705|ref|XP_012477234.1| (PREDICTED: uncharacterized protein LOC105792926 [Gossypium raimondii])

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-107
Identity = 202/291 (69.42%), Postives = 231/291 (79.38%), Query Frame = 1 

Query: 4   LQFHHSILSPIRLPITTIGAKISLPTNYFLPPYTLSKPLHRNFLSSAARDKKSEIYNIPS 63
           + FH +I  P          K +L ++Y  P          +F    A+ ++ +I + P 
Sbjct: 21  ISFHFNIFPPFST------VKFALRSHYASPK--------TSFSMLKAKRREEDISSQPF 80

Query: 64  TEIEVVDEEREDYDDGDDRFWSESGFRGREEEKDYDRDPEFAEIIGTSLDDPEKARSKME 123
            +IE+ D    DY D ++ + + SGFRGREEEK+YD+DPEFAEI+G+ LDDPEKARSKME
Sbjct: 81  -DIEMDD----DYGDDNEGYEASSGFRGREEEKNYDKDPEFAEILGSCLDDPEKARSKME 140

Query: 124 ERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSWHI 183
           +RLRKKRNKIL  KTGS  P+KVTFNKFDFSNSYIWFEFYNTPL KDI+LICDTIRSWHI
Sbjct: 141 DRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDISLICDTIRSWHI 200

Query: 184 IGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVTPTTFYNIGDFEVQDNLARIWVDIGTS 243
           IGRLGGCNSMNMQLSQSPL+KRPSYDAIQGANV PTTFYNIGD EVQDNLARIWVDIGT+
Sbjct: 201 IGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQDNLARIWVDIGTT 260

Query: 244 EPLLLDVLINALTQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 295
           EPL+LDVLINALTQISSDY+ IKQLVFGGSE ENWKE LTTEDAGYS H+I
Sbjct: 261 EPLILDVLINALTQISSDYIAIKQLVFGGSELENWKESLTTEDAGYSVHRI 292

The following BLAST results are available for this feature:
BLAST of MELO3C015440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZB5_CUCSA2.2e-16195.58Uncharacterized protein OS=Cucumis sativus GN=Csa_1G580220 PE=4 SV=1[more]
A0A0B0NCN4_GOSAR3.3e-10970.10Dna-directed rna polymerase i subunit rpa2 OS=Gossypium arboreum GN=F383_09136 P... [more]
A0A0D2S7D3_GOSRA8.2e-10869.42Uncharacterized protein OS=Gossypium raimondii GN=B456_004G283500 PE=4 SV=1[more]
W9QJT8_9ROSA1.4e-10782.02Uncharacterized protein OS=Morus notabilis GN=L484_027234 PE=4 SV=1[more]
A0A061GKX7_THECC3.5e-10679.75Ribonuclease P protein component 3 OS=Theobroma cacao GN=TCM_037715 PE=4 SV=1[more]
BLAST of MELO3C015440 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29400.17.2e-9570.89 Protein of unknown function (DUF3531)[more]
AT5G08400.13.5e-4946.39 Protein of unknown function (DUF3531)[more]
BLAST of MELO3C015440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099880|ref|XP_008450822.1|1.6e-168100.00PREDICTED: uncharacterized protein LOC103492292 isoform X2 [Cucumis melo][more]
gi|449435820|ref|XP_004135692.1|3.2e-16195.58PREDICTED: uncharacterized protein LOC101205319 [Cucumis sativus][more]
gi|659099878|ref|XP_008450821.1|1.2e-14798.86PREDICTED: uncharacterized protein LOC103492292 isoform X1 [Cucumis melo][more]
gi|728830994|gb|KHG10437.1|4.8e-10970.10dna-directed rna polymerase i subunit rpa2 [Gossypium arboreum][more]
gi|823154705|ref|XP_012477234.1|1.2e-10769.42PREDICTED: uncharacterized protein LOC105792926 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021920DUF3531
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0032774 RNA biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005730 nucleolus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003899 DNA-directed RNA polymerase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU53345melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015440T1MELO3C015440T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU53345MU53345transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021920Protein of unknown function DUF3531PFAMPF12049DUF3531coord: 145..284
score: 1.3
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 14..294
score: 1.2E
NoneNo IPR availablePANTHERPTHR33102:SF2SUBFAMILY NOT NAMEDcoord: 14..294
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C015440Csa1G580220Cucumber (Chinese Long) v2cumeB041
MELO3C015440Cla011233Watermelon (97103) v1mewmB271
MELO3C015440ClCG03G015860Watermelon (Charleston Gray)mewcgB245
MELO3C015440Cla97C03G066130Watermelon (97103) v2mewmbB249
MELO3C015440Bhi02G001593Wax gourdmewgoB304
MELO3C015440CSPI01G27830Wild cucumber (PI 183967)cpimeB042
MELO3C015440Cucsa.288540Cucumber (Gy14) v1cgymeB481
MELO3C015440CmaCh10G006980Cucurbita maxima (Rimu)cmameB059
MELO3C015440CmoCh10G007250Cucurbita moschata (Rifu)cmomeB050
MELO3C015440Lsi06G002520Bottle gourd (USVL1VR-Ls)lsimeB396
MELO3C015440Cp4.1LG18g03710Cucurbita pepo (Zucchini)cpemeB335
MELO3C015440CsGy1G027060Cucumber (Gy14) v2cgybmeB038
MELO3C015440Carg13017Silver-seed gourdcarmeB0096
MELO3C015440CsaV3_UNG050390Cucumber (Chinese Long) v3cucmeB349
MELO3C015440CsaV3_1G040120Cucumber (Chinese Long) v3cucmeB042
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015440Silver-seed gourdcarmeB0036
MELO3C015440Silver-seed gourdcarmeB0203
MELO3C015440Silver-seed gourdcarmeB0573
MELO3C015440Silver-seed gourdcarmeB0764
MELO3C015440Silver-seed gourdcarmeB0882
MELO3C015440Cucumber (Chinese Long) v3cucmeB117
MELO3C015440Cucumber (Chinese Long) v3cucmeB283
MELO3C015440Watermelon (97103) v2mewmbB240
MELO3C015440Watermelon (97103) v2mewmbB257
MELO3C015440Watermelon (97103) v2mewmbB270
MELO3C015440Wax gourdmewgoB271
MELO3C015440Wax gourdmewgoB277
MELO3C015440Wax gourdmewgoB289
MELO3C015440Melon (DHL92) v3.5.1memeB102
MELO3C015440Melon (DHL92) v3.5.1memeB105
MELO3C015440Melon (DHL92) v3.5.1memeB115
MELO3C015440Cucurbita moschata (Rifu)cmomeB097
MELO3C015440Cucumber (Gy14) v1cgymeB168
MELO3C015440Cucurbita maxima (Rimu)cmameB104
MELO3C015440Cucurbita maxima (Rimu)cmameB152
MELO3C015440Cucurbita maxima (Rimu)cmameB407
MELO3C015440Cucurbita maxima (Rimu)cmameB721
MELO3C015440Cucurbita moschata (Rifu)cmomeB141
MELO3C015440Cucurbita moschata (Rifu)cmomeB208
MELO3C015440Cucurbita moschata (Rifu)cmomeB713
MELO3C015440Wild cucumber (PI 183967)cpimeB111
MELO3C015440Wild cucumber (PI 183967)cpimeB277
MELO3C015440Cucumber (Chinese Long) v2cumeB110
MELO3C015440Cucumber (Chinese Long) v2cumeB287
MELO3C015440Watermelon (Charleston Gray)mewcgB233
MELO3C015440Watermelon (Charleston Gray)mewcgB263
MELO3C015440Watermelon (Charleston Gray)mewcgB251
MELO3C015440Watermelon (97103) v1mewmB274
MELO3C015440Watermelon (97103) v1mewmB277
MELO3C015440Watermelon (97103) v1mewmB285
MELO3C015440Cucurbita pepo (Zucchini)cpemeB083
MELO3C015440Cucurbita pepo (Zucchini)cpemeB620
MELO3C015440Cucurbita pepo (Zucchini)cpemeB747
MELO3C015440Bottle gourd (USVL1VR-Ls)lsimeB103
MELO3C015440Bottle gourd (USVL1VR-Ls)lsimeB296
MELO3C015440Bottle gourd (USVL1VR-Ls)lsimeB433
MELO3C015440Cucumber (Gy14) v2cgybmeB096