MELO3C015387.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015387.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	GDSL-like lipase/acylhydrolase
Location	chr02 : 1258232 .. 1261318 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAACGATGAGGCGATGATTGAGATTCCCACATCGGGGAAGCTATTGGTAGGGACCTCAGAGTGTACTATAAATACAAACGATGGCTATCATTTAAACATACTTACCTGGACGGGGTCAATGGGCGATCAAGAAGATCCATGGCCTAGGTTGGTGACCTCCATTGCACACACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGCAGCGGGGGCCTGCGTTCGCGCGGCCCCTTCCCAATTCTCCAGTTCCAACCTTTCTACCTTCCAGGTATTTCTTTCAATTGGAAAGTTGAATTGTGTCGTCATTCTTCGTATGAATGAATCTATAATATGATGTAGCGTGTCTATGTTTATGAATGAATTTGAGCTATACATATTATGGATCACTGGGCCTCGTGAAGTTGCTTTGGGATTAGAATTGAGAAGTAGATGGAAACATTAGTTATTGATGAATGGAAAATGTTAAGTAATTGTGGGCTGTTTGATTTCGGGGTCTTTATGGGTTGACATTTGATGGGTTGAAATGGAAGTTTAACATTTCCAAATTGCTGAATTTCTTAGAAATCAACTGAACCTGAAATTAGTAAGTCATATTCTGGATGTTTTGGTTTTGATGCAATTTTATTCATGTATTCTGAAGCTCGAAGTCCAAGTGAAATTACCATCAGATTCTTCTTTGTGGTTATCAAATTTCATTCGGGATTGATTCTTAATTAAAGATGGAATCTATTTTCTTCAAAACCATCATATAGCAGGTGAAGTGGAAAATACGAAGGACTTGATGTGGGCATTTTTAAATTTTTTTGATGTGAATGAAAATGTCTACTTTTACGAAAACGCCAATAGAAGTATCAAACGAGAACATAAATGGAAGTATCAACAAAATGTTCCAGCATTTAAAAAGTAAATCAGAATATGAACATTTAAAAAGCAAATCAGACTTTTTTTTCGTTAAGTTAGAGAACTTTAAAATATGAAGTTCACATCAAATTTACACCAAATTTGTTGCCAGGGTTCGTTTTTTATGTCCATAAGCTTACTTTGCGACTCCTACAGTAGCGTTGTTTTGTCCATTGAGTTTCAATGCTCTCAAGGGAAACCAAATCTATGCATGTTTCCGAGTACTTGTATTATAACGTCAGGACCCTCTTCCTAGCACCAAGAAGCCACAAGGATTCTTCTTTACATCCAATTTTAGGGCATCAATGCAATAATCTTTTACAAAGGTTCTATGACGGACTACAGAGAATTTTTTTTTTTTCATTTCAATTACTATCAAAACGACTCCAAAGTTCTGTTACCGGCGTCCCCTTTTCACATCGCTGCGGAGACCCTCAGACAACTAACTGAGTGAAATCCAAAGAAGGATGAGCAAGAGAGAAAGAGAGAATGAAACTTATTGGGAATGGGACCAAGTTGTGAGAATGAAATAGTAATAAAAAGTAGTGTATTGATGCAACCCTGTAACAATTCCAATGTTCGATTAGAAAAGATTAAATCTATCATAAGACGTTGTAAGTAACAAGAATGGGTTTAATATTTAATACCAAGGCAACTGACCTTTAAAGTGAAATACTTTTGATTAACATGCTACTTTGATAAACATTCTGACAGATTTTCTTTTTTCATGAATTGTTTTAATTTGATATCTACTATTAGTGAAGATTTTAAAAATTGATAACAATTATTGTCGAAGTGAGGTAACAAGTACTGGTCGCATCTTCAAAGTTAGGTGAAATAGATGAAAAATAAGGTTCTAAATAAATGTGTAGTATTAAATAGTGTAAATGTGTAGAATTCAATAATGAGCTGCCATTAAGTTGGTATGATTGGGTTGTCTAGCAGTGAGTTATAGAACTTGTGGGCAAAACAATTTTCTTACACATCCAACCCAACTTAGTGAGATAGACGTCCACAATAATTTTTTGATATACATGTTTTTGTTTGTAATTTGAATAGAAATTCTAATCTTGAATGAAAATTAGAGAAGAGTAAGAAAACAAAACCAATAGTCTTTTAAAGATAGCAACGAAAGCCGAAAGGTTAGGGAGCAAGTCCCACATCGGAGAAACAAGAAAAAGGAACCTCACAAAGCGTTATAAATACAAGACAATGGCTTCCATTCCAACATACTTACCTGGACGGGGTCAATGGGCGATCAGAAAGGTCCATGGCCTAGGTTGGTGACCTCCATTGCACATACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTTCCCGATTCTCCATTGTCAACTCTTCGATTTTCCGGATGTGTATAGCACTCTAAAATTTTTTCCTGTAGAAATATCAATGCCAACTAAAGATGGGGTTTACCTCTGAAAAACGGATGCTATTTAAGGCTGGAAAAATTCAGCAAAAATGAATAGGGTGCGGCAAACCCAAAGTCTCCGGTTTACATTTGCTTTGTCTCTGACTTTCTTGTTCTCTGCAAGGAAGGTGAAGATGTAATTATGTTTGTCCTCAGCTGAACATGGGTTAGGGTGTAGAGTAGTTCTATATTTTCTAAAAGGTGACGTTTCATGTTGGGTTTCAAATAGTTCTTTATTTTCATAACCTTCTCAGAACAGCTAATTTTTTCTAAATGGTTTGACAAATTGAGCTTCAGAGAATCGAAATATCTTTTGAACAAAGAACTCAAATAACTCGCTTTGTGGAATGAGGATAGATTGATAGTTTCTATGTTCTGTTTTTCTTTTTCAACTCATATTTTGATAAGACCAAGCTTTTCTCTTGTTTTTAGGTTTTGGAAATTCAAGTGCTTGCTTAAGATATGGATAAGAGGCAAAAACCAAAAAAAAGGAAGTAAATGAAATCTTTTCCTATCTGAGGCTGATTTGTATTGTACGTACTTTTAGTTGATGTGATTCTATTCATGACTGTTTACATTCACGTCAGTCCTGAGACTCCGAGATTGATTAGAGATTTGAAAGGAACTCTCAATTAGCTTGCGAGCTTTACTTATATGATTAATAACTT

mRNA sequence

ATGACCAACGATGAGGCGATGATTGAGATTCCCACATCGGGGAAGCTATTGGTAGGGACCTCAGAGTGTACTATAAATACAAACGATGGCTATCATTTAAACATACTTACCTGGACGGGGTCAATGGGCGATCAAGAAGATCCATGGCCTAGGTTGGTGACCTCCATTGCACACACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGCAGCGGGGGCCTGCGTTCGCGCGGCCCCTTCCCAATTCTCCAGTTCCAACCTTTCTACCTTCCAGGTTTTGGAAATTCAAGTGCTTGCTTAAGATATGGATAAGAGGCAAAAACCAAAAAAAAGGAAGTAAATGAAATCTTTTCCTATCTGAGGCTGATTTGTATTGTACGTACTTTTAGTTGATGTGATTCTATTCATGACTGTTTACATTCACGTCAGTCCTGAGACTCCGAGATTGATTAGAGATTTGAAAGGAACTCTCAATTAGCTTGCGAGCTTTACTTATATGATTAATAACTT

Coding sequence (CDS)

ATGACCAACGATGAGGCGATGATTGAGATTCCCACATCGGGGAAGCTATTGGTAGGGACCTCAGAGTGTACTATAAATACAAACGATGGCTATCATTTAAACATACTTACCTGGACGGGGTCAATGGGCGATCAAGAAGATCCATGGCCTAGGTTGGTGACCTCCATTGCACACACCGGAGGGGTGCCCGCCTAA

Protein sequence

MTNDEAMIEIPTSGKLLVGTSECTINTNDGYHLNILTWTGSMGDQEDPWPRLVTSIAHTGGVPA

Homology

[Close]

BLAST of MELO3C015387.2 vs. NCBI nr
Match: PHT62339.1 (hypothetical protein T459_33835 [Capsicum annuum])

HSP 1 Score: 56.6 bits (135), Expect = 3.6e-05
Identity = 23/28 (82.14%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 30  GYHLNILTWTGSMGDQEDPWPRLVTSIA 58
           G H+NILTWTGSMGDQ+ PWPRLVT IA
Sbjct: 479 GQHINILTWTGSMGDQQGPWPRLVTFIA 506

[Close]

BLAST of MELO3C015387.2 vs. NCBI nr
Match: XP_020869021.1 (uncharacterized protein At3g43530-like [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 52.0 bits (123), Expect = 8.8e-04
Identity = 23/27 (85.19%), Postives = 23/27 (85.19%), Query Frame = 0


Query: 36  LTWTGSMGDQEDPWPRLVTSIAHTGGV 63
           LTWTGS  DQED WPRLVTSIAHTG V
Sbjct: 291 LTWTGSTRDQEDEWPRLVTSIAHTGRV 317

[Close]

BLAST of MELO3C015387.2 vs. TrEMBL
Match: tr|A0A2G2XY25|A0A2G2XY25_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_33835 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-05
Identity = 23/28 (82.14%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 30  GYHLNILTWTGSMGDQEDPWPRLVTSIA 58
           G H+NILTWTGSMGDQ+ PWPRLVT IA
Sbjct: 479 GQHINILTWTGSMGDQQGPWPRLVTFIA 506

[Close]

BLAST of MELO3C015387.2 vs. TrEMBL
Match: tr|A0A178UXY6|A0A178UXY6_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g27120 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.9e-04
Identity = 22/28 (78.57%), Postives = 23/28 (82.14%), Query Frame = 0


Query: 35 ILTWTGSMGDQEDPWPRLVTSIAHTGGV 63
          +LTWTGS  DQED WPRLVTSIAH G V
Sbjct: 7  LLTWTGSTRDQEDEWPRLVTSIAHNGRV 34

The following BLAST results are available for this feature:

BLAST of MELO3C015387.2 vs. NCBI nr


Match Name	E-value	Identity	Description
PHT62339.1	3.6e-05	82.14	hypothetical protein T459_33835 [Capsicum annuum]	[more]
XP_020869021.1	8.8e-04	85.19	uncharacterized protein At3g43530-like [Arabidopsis lyrata subsp. lyrata]	[more]

BLAST of MELO3C015387.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C015387.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C015387.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2G2XY25\|A0A2G2XY25_CAPAN	2.4e-05	82.14	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_33835 PE=4 SV=1	[more]
tr\|A0A178UXY6\|A0A178UXY6_ARATH	9.9e-04	78.57	Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g27120 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015387.2.1	MELO3C015387.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015387.2	Wax gourd	medwgoB303
MELO3C015387.2	Cucumber (Gy14) v2	cgybmedB032
MELO3C015387.2	Cucumber (Gy14) v1	cgymedB480
MELO3C015387.2	Cucurbita maxima (Rimu)	cmamedB125
MELO3C015387.2	Cucurbita moschata (Rifu)	cmomedB115
MELO3C015387.2	Cucurbita moschata (Rifu)	cmomedB058
MELO3C015387.2	Cucurbita pepo (Zucchini)	cpemedB391
MELO3C015387.2	Cucurbita pepo (Zucchini)	cpemedB731
MELO3C015387.2	Wild cucumber (PI 183967)	cpimedB036
MELO3C015387.2	Cucumber (Chinese Long) v2	cumedB033
MELO3C015387.2	Bottle gourd (USVL1VR-Ls)	lsimedB114
MELO3C015387.2	Bottle gourd (USVL1VR-Ls)	lsimedB418
MELO3C015387.2	Watermelon (Charleston Gray)	medwcgB237
MELO3C015387.2	Watermelon (Charleston Gray)	medwcgB229
MELO3C015387.2	Watermelon (97103) v1	medwmB262
MELO3C015387.2	Watermelon (97103) v1	medwmB276
MELO3C015387.2	Silver-seed gourd	carmedB0905
MELO3C015387.2	Cucumber (Chinese Long) v3	cucmedB039
MELO3C015387.2	Watermelon (97103) v2	medwmbB235