MELO3C015346 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015346
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein of unknown function (DUF1068)
Location	chr2 : 943237 .. 943509 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGAAGAACTAAGAAAAGACCGGGCGACTCTAATAAGAGAAGAGTTAGATTTATTAAAGATAGTGAGCGAAGAGAATATAGAGCACTACAAATCATTGACGGTAGATGCGAAGAAATCTTCATCTCAATATAAGAAAGAGGTAGAAAATTGCAACATTGGAGTTAGAACTTGTGAGGAAGCAAGAGAAAGAGCTCAAGAAGAGCTTGTTGAAGAATGCAAACTCACTGCTTTGTGGCAAAAAAGGGCTGAAATGCTTGCAAAACCATGA

mRNA sequence

ATGATAGAAGAACTAAGAAAAGACCGGGCGACTCTAATAAGAGAAGAGTTAGATTTATTAAAGATAGTGAGCGAAGAGAATATAGAGCACTACAAATCATTGACGGTAGATGCGAAGAAATCTTCATCTCAATATAAGAAAGAGGTAGAAAATTGCAACATTGGAGTTAGAACTTGTGAGGAAGCAAGAGAAAGAGCTCAAGAAGAGCTTGTTGAAGAATGCAAACTCACTGCTTTGTGGCAAAAAAGGGCTGAAATGCTTGCAAAACCATGA

Coding sequence (CDS)

ATGATAGAAGAACTAAGAAAAGACCGGGCGACTCTAATAAGAGAAGAGTTAGATTTATTAAAGATAGTGAGCGAAGAGAATATAGAGCACTACAAATCATTGACGGTAGATGCGAAGAAATCTTCATCTCAATATAAGAAAGAGGTAGAAAATTGCAACATTGGAGTTAGAACTTGTGAGGAAGCAAGAGAAAGAGCTCAAGAAGAGCTTGTTGAAGAATGCAAACTCACTGCTTTGTGGCAAAAAAGGGCTGAAATGCTTGCAAAACCATGA

Protein sequence

MIEELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEARERAQEELVEECKLTALWQKRAEMLAKP*

Homology

[Close]

BLAST of MELO3C015346 vs. TrEMBL
Match: A0A0A0M1L2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571290 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-32
Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 1  MIEELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCE 60
          MI+ELRKDRATLI EELDLL IV++EN++ YKSL V+AKK SSQYKKE ENC   VRTCE
Sbjct: 1  MIKELRKDRATLIMEELDLLNIVNKENMKRYKSLIVNAKKPSSQYKKEAENCTNRVRTCE 60

Query: 61 EARERAQEELVEECKLTALWQKRAEMLAKP 91
          EARERAQE+LVEECKLTALWQKRAEMLAKP
Sbjct: 61 EARERAQEKLVEECKLTALWQKRAEMLAKP 90

[Close]

BLAST of MELO3C015346 vs. TrEMBL
Match: A0A061E4K7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008923 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.9e-20
Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EEL KD   L+ EE++L KIVS + ++H  +LT+D K++SS Y+KE E CN GV TCEEA
Sbjct: 85  EELEKDIVALLSEEINLQKIVSNDTLKHTWALTIDTKRASSHYQKEAEKCNAGVGTCEEA 144

Query: 63  RERAQEELVEECKLTALWQKRAEML 88
           RE+A+ EL EE KLTALW+KRA  L
Sbjct: 145 REKAEAELREELKLTALWEKRAHEL 169

[Close]

BLAST of MELO3C015346 vs. TrEMBL
Match: A0A0S3S5E9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G147400 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.9e-20
Identity = 46/82 (56.10%), Postives = 65/82 (79.27%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EE+ KD   ++ EEL+L K+V++E++EH K L +DA+KS SQY+KE E CNIG+ TCEEA
Sbjct: 89  EEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQEELVEECKLTALWQKRA 85
           R+RA+ EL+EE +LT +W+ RA
Sbjct: 149 RQRAEAELIEERRLTTMWENRA 170

[Close]

BLAST of MELO3C015346 vs. TrEMBL
Match: V7BPV4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G094800g PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.9e-20
Identity = 47/82 (57.32%), Postives = 65/82 (79.27%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EE+ K   T++ EEL+L K+V+ E++EH K L +DA+K+ SQY+KE E CNIG+ TCEEA
Sbjct: 89  EEMNKGLLTMLSEELNLQKVVANESLEHTKRLVMDARKTFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQEELVEECKLTALWQKRA 85
           R+RA+ EL+EE +LTALW+ RA
Sbjct: 149 RQRAEAELIEERRLTALWENRA 170

[Close]

BLAST of MELO3C015346 vs. TrEMBL
Match: A0A0L9VCU8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g155000 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.9e-20
Identity = 46/82 (56.10%), Postives = 65/82 (79.27%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EE+ KD   ++ EEL+L K+V++E++EH K L +DA+KS SQY+KE E CNIG+ TCEEA
Sbjct: 89  EEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQEELVEECKLTALWQKRA 85
           R+RA+ EL+EE +LT +W+ RA
Sbjct: 149 RQRAEAELIEERRLTTMWENRA 170

[Close]

BLAST of MELO3C015346 vs. TAIR10
Match: AT2G24290.1 (AT2G24290.1 Protein of unknown function (DUF1068))

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-15
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EE+ K    L+ EEL L + V++E+  H      +AK+ +SQY+KE E CN     CE A
Sbjct: 84  EEMEKPFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEICESA 143

Query: 63  RERAQEELVEECKLTALWQKRAEML 88
           RERAQ  L++E K+T LW++RA  L
Sbjct: 144 RERAQALLLKERKITFLWERRARQL 168

[Close]

BLAST of MELO3C015346 vs. TAIR10
Match: AT4G30996.1 (AT4G30996.1 Protein of unknown function (DUF1068))

HSP 1 Score: 77.8 bits (190), Expect = 3.9e-15
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           +E+ K    L+ EEL L + V++E+  H      +AK+ +SQY+KE E CN     CE A
Sbjct: 83  QEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEICESA 142

Query: 63  RERAQEELVEECKLTALWQKRA 85
           RERA+  L++E K+T+LW+KRA
Sbjct: 143 RERAEALLIKERKITSLWEKRA 164

[Close]

BLAST of MELO3C015346 vs. TAIR10
Match: AT2G32580.1 (AT2G32580.1 Protein of unknown function (DUF1068))

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-14
Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           E+  K+ A L+ EEL   +  S E  +   +  ++AKK +S Y+KE + CN G+ TCEEA
Sbjct: 79  EDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQKEADKCNSGMETCEEA 138

Query: 63  RERAQEELVEECKLTALWQKRA 85
           RE+A++ LVE+ KLT++W++RA
Sbjct: 139 REKAEKALVEQKKLTSMWEQRA 160

[Close]

BLAST of MELO3C015346 vs. TAIR10
Match: AT1G05070.1 (AT1G05070.1 Protein of unknown function (DUF1068))

HSP 1 Score: 70.9 bits (172), Expect = 4.7e-13
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           E+  K+ A L+ EEL L +  S E  +      ++AKK +S Y+KE + CN G+ TCEEA
Sbjct: 80  EDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQKEADKCNSGMETCEEA 139

Query: 63  RERAQEELVEECKLTALWQKRA 85
           RE+A+  L E+ KLT+ W++RA
Sbjct: 140 REKAELALAEQKKLTSRWEERA 161

[Close]

BLAST of MELO3C015346 vs. TAIR10
Match: AT4G04360.1 (AT4G04360.1 Protein of unknown function (DUF1068))

HSP 1 Score: 66.6 bits (161), Expect = 8.9e-12
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EE       ++ EEL L +  ++E+      L +DAKK++SQY+KE + C++G+ TCE A
Sbjct: 80  EESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQKEADKCSMGMETCELA 139

Query: 63  RERAQEELVEECKLTALWQKRA 85
           RE+A+  L E+ +L+ +W+ RA
Sbjct: 140 REKAEAALDEQRRLSYMWELRA 161

[Close]

BLAST of MELO3C015346 vs. NCBI nr
Match: gi|700211010|gb|KGN66106.1| (hypothetical protein Csa_1G571290 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32
Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 1  MIEELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCE 60
          MI+ELRKDRATLI EELDLL IV++EN++ YKSL V+AKK SSQYKKE ENC   VRTCE
Sbjct: 1  MIKELRKDRATLIMEELDLLNIVNKENMKRYKSLIVNAKKPSSQYKKEAENCTNRVRTCE 60

Query: 61 EARERAQEELVEECKLTALWQKRAEMLAKP 91
          EARERAQE+LVEECKLTALWQKRAEMLAKP
Sbjct: 61 EARERAQEKLVEECKLTALWQKRAEMLAKP 90

[Close]

BLAST of MELO3C015346 vs. NCBI nr
Match: gi|502113418|ref|XP_004494644.1| (PREDICTED: uncharacterized protein LOC101512065 [Cicer arietinum])

HSP 1 Score: 105.1 bits (261), Expect = 6.4e-20
Identity = 49/84 (58.33%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1   MIEELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCE 60
           MIEE+ KD  T++ EEL L KIV+ E +EH K L ++A+ + SQYKKE E CN+G+ TCE
Sbjct: 72  MIEEMNKDPLTILSEELRLQKIVANETLEHTKRLVINARNTFSQYKKEAEKCNLGMETCE 131

Query: 61  EARERAQEELVEECKLTALWQKRA 85
           E RERA+ E+VEE +LTALW+ RA
Sbjct: 132 EERERAEAEVVEERRLTALWENRA 155

[Close]

BLAST of MELO3C015346 vs. NCBI nr
Match: gi|920711642|gb|KOM52891.1| (hypothetical protein LR48_Vigan09g155000 [Vigna angularis])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 46/82 (56.10%), Postives = 65/82 (79.27%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EE+ KD   ++ EEL+L K+V++E++EH K L +DA+KS SQY+KE E CNIG+ TCEEA
Sbjct: 89  EEMNKDLLAMLSEELNLQKVVAKESLEHTKRLVMDARKSFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQEELVEECKLTALWQKRA 85
           R+RA+ EL+EE +LT +W+ RA
Sbjct: 149 RQRAEAELIEERRLTTMWENRA 170

[Close]

BLAST of MELO3C015346 vs. NCBI nr
Match: gi|593693078|ref|XP_007147081.1| (hypothetical protein PHAVU_006G094800g [Phaseolus vulgaris])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 47/82 (57.32%), Postives = 65/82 (79.27%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EE+ K   T++ EEL+L K+V+ E++EH K L +DA+K+ SQY+KE E CNIG+ TCEEA
Sbjct: 89  EEMNKGLLTMLSEELNLQKVVANESLEHTKRLVMDARKTFSQYQKEAEKCNIGMETCEEA 148

Query: 63  RERAQEELVEECKLTALWQKRA 85
           R+RA+ EL+EE +LTALW+ RA
Sbjct: 149 RQRAEAELIEERRLTALWENRA 170

[Close]

BLAST of MELO3C015346 vs. NCBI nr
Match: gi|590692543|ref|XP_007044084.1| (Uncharacterized protein TCM_008923 [Theobroma cacao])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = 1


Query: 3   EELRKDRATLIREELDLLKIVSEENIEHYKSLTVDAKKSSSQYKKEVENCNIGVRTCEEA 62
           EEL KD   L+ EE++L KIVS + ++H  +LT+D K++SS Y+KE E CN GV TCEEA
Sbjct: 85  EELEKDIVALLSEEINLQKIVSNDTLKHTWALTIDTKRASSHYQKEAEKCNAGVGTCEEA 144

Query: 63  RERAQEELVEECKLTALWQKRAEML 88
           RE+A+ EL EE KLTALW+KRA  L
Sbjct: 145 REKAEAELREELKLTALWEKRAHEL 169

The following BLAST results are available for this feature:

BLAST of MELO3C015346 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1L2_CUCSA	1.0e-32	82.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571290 PE=4 SV=1	[more]
A0A061E4K7_THECC	9.9e-20	58.82	Uncharacterized protein OS=Theobroma cacao GN=TCM_008923 PE=4 SV=1	[more]
A0A0S3S5E9_PHAAN	9.9e-20	56.10	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G147400 PE=...	[more]
V7BPV4_PHAVU	9.9e-20	57.32	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G094800g PE=4 SV=1	[more]
A0A0L9VCU8_PHAAN	9.9e-20	56.10	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g155000 PE=4 SV=1	[more]

BLAST of MELO3C015346 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24290.1	2.9e-15	44.71	Protein of unknown function (DUF1068)	[more]
AT4G30996.1	3.9e-15	43.90	Protein of unknown function (DUF1068)	[more]
AT2G32580.1	1.9e-14	43.90	Protein of unknown function (DUF1068)	[more]
AT1G05070.1	4.7e-13	43.90	Protein of unknown function (DUF1068)	[more]
AT4G04360.1	8.9e-12	39.02	Protein of unknown function (DUF1068)	[more]

BLAST of MELO3C015346 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700211010\|gb\|KGN66106.1\|	1.5e-32	82.22	hypothetical protein Csa_1G571290 [Cucumis sativus]	[more]
gi\|502113418\|ref\|XP_004494644.1\|	6.4e-20	58.33	PREDICTED: uncharacterized protein LOC101512065 [Cicer arietinum]	[more]
gi\|920711642\|gb\|KOM52891.1\|	1.4e-19	56.10	hypothetical protein LR48_Vigan09g155000 [Vigna angularis]	[more]
gi\|593693078\|ref\|XP_007147081.1\|	1.4e-19	57.32	hypothetical protein PHAVU_006G094800g [Phaseolus vulgaris]	[more]
gi\|590692543\|ref\|XP_007044084.1\|	1.4e-19	58.82	Uncharacterized protein TCM_008923 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010471	DUF1068

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015346T1	MELO3C015346T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010471	Protein of unknown function DUF1068	PFAM	PF06364	DUF1068	coord: 3..85 score: 9.8
None	No IPR available	PANTHER	PTHR32254	FAMILY NOT NAMED	coord: 1..87 score: 7.1
None	No IPR available	PANTHER	PTHR32254:SF6	SUBFAMILY NOT NAMED	coord: 1..87 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015346	Csa1G571290	Cucumber (Chinese Long) v2	cumeB041
MELO3C015346	ClCG03G016750	Watermelon (Charleston Gray)	mewcgB245
MELO3C015346	Cla97C03G067070	Watermelon (97103) v2	mewmbB249
MELO3C015346	Cucsa.163600	Cucumber (Gy14) v1	cgymeB286
MELO3C015346	CsGy1G026090	Cucumber (Gy14) v2	cgybmeB038
MELO3C015346	CsaV3_1G039220	Cucumber (Chinese Long) v3	cucmeB042

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015346	Wax gourd	mewgoB294
MELO3C015346	Cucurbita maxima (Rimu)	cmameB122
MELO3C015346	Cucurbita moschata (Rifu)	cmomeB110
MELO3C015346	Wild cucumber (PI 183967)	cpimeB042
MELO3C015346	Watermelon (97103) v1	mewmB271
MELO3C015346	Cucurbita pepo (Zucchini)	cpemeB622
MELO3C015346	Bottle gourd (USVL1VR-Ls)	lsimeB396
MELO3C015346	Silver-seed gourd	carmeB0555
MELO3C015346	Watermelon (97103) v2	mewmbB260