MELO3C015235 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015235
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSister-chromatide cohesion complex Cohesin, subunit SA
Locationchr2 : 141940 .. 160047 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTGCTGCTGCTGCTCCTATTTCTTCTGGACTGGCCACTCGCCGCTCGGTGATGATTGATCTTTGGAGTTTTCTTCTTCTTCTTCTTNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGTGGTGGGGAGGGGGTGGGTGGGGGGAGAACGATGTATTTATTTGAAGTTATTTATGGTCTTCGATACAGAAAAGGACTCGGGCTCAGACTGTACCCGCTGAAGTTCAACCTACCAATGCTGATGGTGGTGGTGTCGACAACAATGACAGGACCAGCGATGCTAGCGGCCAGGCCGACCGAGATAGCTCACCTGAAAACTTTGAAGAGTCTCGGCCGCCTAGAACTAAGCGGAACCGATTGGAAGGCACTTCGAATGCTGCACATGAAGTCTCCGAGCAGAGTCTGATTGGTAACTAATTTGATATTCTTTTATCGGTACAATGAATGTTCATTTTCTGAATTAGGTTTAATTTATCTACCACTTATTGAGGTTTCTTTTAATTTTGATAATTGAAAGTACAAAATGGGGTTGTTGAAGAATGGGCTTTAATCATCATGGTGCTCACATTCTTTCCATCGTTTTGCAACTGTATTCACACTCTATAAAAATCTTCTTTAATGTCGAATGCCTGAAATATATGGGTGTGCGTATTGGAAATGAGACAATTATCTGGTGCTCACTCATAGTAACAAATCAACGATACAAGCCTTGCTATGTTATGCTTTCAGGAGATAAGATGGGAATCTTGATAAGCACCATCATGTCCTATTATTTTCTGCAGATGTTATAAAAGGAAATGGGAAATTTATTCCTCAAGTTGTTAAGCGTTGGGTGGAGAGGTATGAAAAAGATCCAAAAACTTCAATGGTCGAGCTTCTGGCAATGCTGTTTGAGGTAATTCAAAGTTTTTTGATGGATCTTATTTGAGTGAGCATTTAGAAAGTAGCCCTTTCTTTCAATGTTTTCTCTTTGAACCTTGGATAATGTAAGTAGTTGGGAGGATGATTTAGACCCCTTGAACCAGGGGATCATTATATTAATGTCTAATTAACAATGAGACCATCCTCTTATAGATGCTGTATTGTAACTAAAGAAAGATTGTTGATTATTGAAATCTACGAACTTTCAGGCATGTGGAGCTAAATACCATATCAAGGGTGACTTCCTGGAAGAGACTGATGTTGATGATGTTGTTGTCGCACTTGTTAATCTCGCTAAAAGAGTATCCTAAACCTGCCTTTTAATCTTTATGCACATTTTGTTTATATTAAACTCTTTTTTACCCTCTCCATTTTGTCATTATCACTCCTTTACTGTCATTTTTTATTTGAGTTCTCTTAAAACTTGCACAAATTTGCCTCTGAAACATTGCCTGGACTCCCTGATCACAGGGTGAAGTTGAAGACTATCAAAGTTCTAAAAGGAAGGAGTTCAAAAGCTTCAAAGATAATCTCGAGTCATTCTGGGACCACTTGGTCCACGAGTGTCAACATGGGCCTTTATTTGATCAGGTGTTATTTGATAAATGTGTGGACTACATAATTGCATTATCATGGTTAGTAAAGAACTGCAAAGTCTGAATTTATCATTTAGTACTTTCTTTAAAGTAATTCTCTCTCCCTAGAATAATTTATTTATTTATTTTAATATGAATATGGTGCAGTACTCCTCCGAGGGTTTATCGTCAAGTAGCTTCATTGATGGGTCTACAACTTGTTACATCTTTCATTGGTGTTGCCAAAATGCTTGGTGTTCAACGTGAAACTACTCGTAGACAATTAGATGCTGAAAAGAAGAAACGAGCTGAGGGACCTCTTGTAGAGTCTTTAAATAAAAGGTTTTCTATGACTCATGAAAATATTACAGTGTTGGAGGAAATGATGCGCAAGATTTTTACGGGGTACAATCTTTTCTTTTTATTTCTAAATGGACTGATAGCTTGTTCTGTTAGGAATGTTGGATTCTTTTTCATTACTTCCTAAGTTTGATTAGTGTGTTGTTTTGAAGGTTATTTGTGCATCGTTATCGTGATATTGATCCAAACATCAGAATGTCGTGCATACAATCATTAGGAGTATGGATTTTGTCCTACCCATCACTATTTTTGCAGGATTTATACTTAAAGTATCTTGGGTGGACATTGAATGACAAAGTAAGTTAATTGATTTGGAAAATTGATTTGGAAAATTTGACGTTTCCTATTCACCTTCCATGTGGAAGCATCTTCAATGTTCTCTCTTATTCTGTTGTTGCAGAATGCTGGAGTCAGAAAAGTTTCTGTTCTTGCGTTGCAGAATCTTTATGAGGTGGACGATAATGTGCCAACACTTAGTCTTTTCACTGAGAGGTTTTCTAATCGGATGATTGAATTGGCAGATGACATTGATGTCTCTGTGGCTGTGTGTGCCATAGGACTTGTTAAACAACTGCTAAGGTAACTCCGCTGAATTTATTTCGAAACCTTGTTTATTCTGCATATTTATTTATTTATTTTTGTGTCTCAGACATCAACTTTTAGCGGACGATGACTTAGGTCCCCTTTATGATTTACTGATTGATGATCCACCAGAGATCAGACATGCCATAGGAGCATTAGTGTATGATCACTTGATTGCTCAGAAGTTCACTAGCTCCCAATCTTCTCGGAGAGGTTTTGCTCTGATAGAAAATATATCTCATGCTTCATGTTATTGTTTGTTTAGAGAAAGTAACTATGGTGCTACTTATTGTCTTAGGTGATGGCAATAGTTCTTCTGAGGTTCATCTTGGCAGAATGTTGCAAATCCTGAGAGAGTTCTCAACGGATCCGATATTAAGTATCTATGTTGTCGATGATGTTTGGGAATATATGAACGCCATGAAGGTATGTTAGAGTGAAAAAAGAGGTTCAGTCTGAGATTTTATTTTATTTTATTTTAAAAAGGAAACAAACTTTTCATTAATGAAATGAAAAGAGGCTAATACTCAAAATAAAATAACACAAATAAAATAATAATAAAAACTTAGCTTTCCAAACCACAAGACCTATTCAAGAAAAATAAATGCTTTCCAATTTCAGCTATTTGCAGGCTTTTCTGAGATTTTATTTTATTACAGTTAATGGGATACTTAAAAATAAACAGACAAGTTAGGTTTATTGAAAATTAAACTCAAGTTCAATTTATTATGCCAGCAGTACAAAGTTAGCTGAATCATAATAGCCTGTTGTAGCTTGTAGATATTAGGACCCAGAAAGCAATTGTTGTTTGATTGTTTCCCCAGGAAAGCTAAGATATGAGATGAGGAAGGAAATTTTTTTGATCATGCAACTAACTGCTTACAAACTTTTTGGTGTGGATTGGGAGCTCTTGCTCTTTTTCCTTTCGGTTCCATCGTGCTTTTTTCAATATGGAAGTGATGGAGTGGTGACTCTTATTTCCCTTCTTGAGAGTCATTCTTTCCGTTTGGGGAGGAGAGACATGAGGGTTCTCGTGTTAGTCTTTCTTTTAGCGTTTGGTTAACCCTTCCTCGGTGGGCGAGTTGATCTTTTCTTTGACTTGGAGGATTAAGGTCCCTAGAAAGGTAAAAATCTTTTCTTGGCTGGTTCTTCACGGCCATCTTGGTACGTTGGACAAACTTTCTAGAAATTTTCCTTCTTTAATTGGTCCTTTTTGCTGTATTTTGTGTTGGAAGGCAAACGAAGACTTGGACCATGTTCTCTGGCAGTTTGAGATGACAAGCTACGTTTGGGATGCCTTTTTCAGGCGTTTGCCATTTCATATGCTCAACATAGAGAGATGATCGAAGAGCTTTTCCTCAATTTGCCATTCGGGGAGAAAGGCCATTTGTTGTGGCATGCCTGTGTGTCATTTGGGTGTTGTGGGATGAGAGAAATAGGAGGGTGTTCAGGAGGTTGAAAGGGGGAGCAGGTAGATTTGATCGGTTGTTTGGTTTCTTGTTTCTTTTTGGGCTTCAATTTCAAAGGCCTTTTGTAATTATCCTTTAGACTTTATTTTATATGGTTGGACCCACTTCTTGAAGAGGGGGTCCCTTGTTTTTTGTGGGCTTGGTTTTTTGTTCCCCCGTGTATTCTTTCATCTTTTTCTCAATGAAAGTTGTTTATTTTATCAAAAAAGAAAAAGAAAAAGAAAACATAGGATCCAATTCACTCTTCCATTAACCGAAATTAAAATTGTCTTTACCAAGTTTAAGGCGACTCAAAACCTATTAAGAAAAAGGCTTCAAAATAAGTCTCCAATTATTAAGAATATCGATTGGCATTGGTTAAAAGATAAAAGTATCATCAACATAGTGAAGATGAGTGACTTCCAACGAGGTACTCTCTGAATCAAACGATGTAGTCTCCTATGATTGCAAAGAGAAAGGGGCACAGAGGGTCGCCTAACTGATGCTCTAATTCTATTTAGCAAATTGTTTCCTCCCATTGATGTAGATCGAGTAGTTCACTATCGATATACACCCGAAATCCAATGTTTCTATTTAGGGCCAAAACTTCAAAGCTCTAAATACACTTCTAAAAAAAATCCAATCTACTTTTATCACATGCCTTTTTAAGATCTAACTTCAAAAGCCATCTTTTCACTTAGTCTATCCCTAACAGCCTCTGCGATAACTAATATCGCATCAAGGATGTGTTGCTCCTCCACCTAGTCCACTTGTTTAGCATCGATCATCAATGGGAGAACCTTCTTCAATATTTTAGGCAACAACTATGTTGCATTAATCTTCATTGATTTACTTATTTATTTTTATTAGGGAATGCTATGTTTAGGCAAGGAAGAAGAGTTATTCTTTCACTACTTTTTGGATCCTTCTTCCTTTAAGAGTCGTTTTTTGAGTTCTTTAGAATGTAAAAATCCTGAAGAAGGTTAACTTCATTATCTGCCAGGTTATCGTGGAAGAATTAATACCTTGGATAGGTTTTTTTAGGAAAATTGCCCTTGGTTGGGTGGGCCTTTTTGCTACATTAAGTGCCTGAGGACGGAAAAAGATATGGATCACCTATTTTGAAAATGTACTTTTGTGTGATTGGTTTTGGAACATTTTTTTTTTGTTGTTCGTTCTTTAGTTAGTTGGTCTAGAGCTTTCATTGATATGATCGATAAGTTCCTCCATCATTCGTTGTCGAAGGAATGGGGTTTTTCTATGGAAGTCTAGGGTGTGCTTTGTTATGGGGTATTTGGTGGGAGTGATAGTAGATCTTCTGTGGAGTATTTGGAGACAAGTTTAATTTTCTGGTTGACCATGGTTTTTCTTACCTAATATCATAATTAGATGCTACTTTAATCTAGTTCAATAATTTGGCAACAAAAGTGATGTAGGAAGAATGAGGTTAATTGGGTAATATTCTAGGTTAATTCCCTTTTTACCCCATTTGTAAATAAACTCTATAAATCAGAGTCTTCCCCTCTTGTATGAAACAAATAATTCTAATAAAAGGTCCACAATCTTGATTCTGGGAGAATTTACCTTGAATTTACTTAGGCTACATAAAAAAGAATATATTGTTGGCTTTATCATCCTGATTTTGCTTGACACACTCTTGGAATAGATCATTCAAGTCTTAAAAATCCTTGGATGGGGATCTCCAAAAAAGAAAAATACTTAGTTGCATACCGGACATCATCTATCTTAGTGTATCCTACTAAATTGTCCAATCATAACTTGCCATGTGGCAAAATTTGCCTTTTCCTTTTTTATAGAACATTTTAGTATTTTTTTGATGTGAGTGGTTAGAAGGGATGAAAAAAGATGAGTGATGCTGGGAATGCACGCAACTATTACCCTCCAAAAAATAATGTACGTATATTGTTGGCTAATGAAGTCTATTTATGATATCATTGTCAATTCACCTACTCCAATAGTCCGAGTTGAGAATAAGTCTGTAAAAAGAGTGCTGAGAGTAATCAATCATATCTAATATGGGGAACTACTTTTAGTTAACTTTGAGTTCTGGATTGCTTTCAAGACAAAATTTGCATTACTGACACTATTATTCATTACCCCTCATTCTTCTAAAGAACAGAGAAGTGAATAGAAGAAGCAGCAAATATGTTTAAAGTTCTTGTTTTTATTTAATAAAAGTTCGCATGGTAAAGCCGTATTCTTATATGGATGTTGTTTCAAACTTTTGACTGCAGGACTGGAAGTGCATTATTTCCAGGCTCCTAGATGAAAATCCAAGAACTGAGCTTACTGATGAGGATGCCACAAACTTGGTTCGTCTCCTTTCTGCATCTATCAAAAAGGCAGTTGGTGAAAGGATTGTTCCTGCCACAGATAATCGGAAGCAGTACTTCAGTAAAGCTCAAAAGGTGTGCAATCTGCAATGGTTTACCTTCCTTTAATATTTAGTGAAAAAAAGGAAATACCTCAATTATAGAACTCTTATTTTAGTTGAACCCAGACAACAATAATAACAATAATCTCCATTTTCTTAGAAACAACTCGTCTTTGATATATATTTTTTGAAACAGAGACAAAACATCAACCTCTTTATTAATATGAATTCAAAGAACAAGAGATTTATATAAAGAGAGCAATAAAGAAGAAAAAAAATGTTAAAAGGGAAACAAACTCGTAAAGGGAGTGATAAAGAAATAATAAGCAAGATTGGAAATACAATTTTCCATCTTTTTTTTAATAAGAAACAAATTTCATTGATGATATGAAATTTACAAAAGGGCATATAGCCAAAGCCAAGGGATTACATAAGACTTCTCCAATTGGCCAATAAGAGCTATAAAAAGATGTACATTTGCACCAAGTCATAGCTAGAAAGAGGACATGTTTATTAGTTGCCGCATCTCCAGCCTCTTCTGAGTATTTAGTGCCGTATCAGAGACCAACAAAAATCCCGCTGATAAGTCTGTTAGTAGCTCCTCTTCGTCTTACTCGGCTTCTTCTTTTTCCCACTCGCTTTCTTCTCCTTCTTCTTCCATCTCTTCTTCATCCAGATTTACCTCTAGAACAAGGTCTAAATGCAACTCAAAAGCACGGAAGTTTCACACCCCTTCAAACCTTTTCCAAAACATTTCATTAGAAGGAACAGAACGAAGGCAAAGCTTAAGAAGAAAAGCTCCAAAGCGAAGTTGATTTCAGAAAGTTAACCAGTTATGTTGGAAGAAAGATGCACTCAATTACAGGTTCCTGCCCAAGTTGCATTCTCAAGCTTCCCATACTCATCAATTCAAGTACTCTGTTTTCTCAGTTCTGAACTCGAAGGTGGAATTTTGAGAGGAGTACCAAGCCATAGCTTGAGTTTTCCTTCTCAGAAGAAAGGAAAGTCAGCCATTGAATCCCCTTTCAGTGTAAGTAGCGAGGAAGTTGATCATTTCGAAAAGTTGGCCGAGAATGAGAGGAAGAGACAAATTGAACCAGTGGAGGCAGATCTGAATGCTTTGTTTCAGAGTGAGGAAGATCTGGTTGATGTTTTGACCTTGGATAATCTATCTCAAGGTCATTCTTGTGGTATCCCTGGACATCTGAAGTCACTGGTAGCAGAATACAATATTGTTTTTGGTTGA

mRNA sequence

ATGGAGGGTGCTGCTGCTGCTCCTATTTCTTCTGGACTGGCCACTCGCCGCTCGAAAAGGACTCGGGCTCAGACTGTACCCGCTGAAGTTCAACCTACCAATGCTGATGGTGGTGGTGTCGACAACAATGACAGGACCAGCGATGCTAGCGGCCAGGCCGACCGAGATAGCTCACCTGAAAACTTTGAAGAGTCTCGGCCGCCTAGAACTAAGCGGAACCGATTGGAAGGCACTTCGAATGCTGCACATGAAGTCTCCGAGCAGAGTCTGATTGATGTTATAAAAGGAAATGGGAAATTTATTCCTCAAGTTGTTAAGCGTTGGGTGGAGAGGTATGAAAAAGATCCAAAAACTTCAATGGTCGAGCTTCTGGCAATGCTGTTTGAGGCATGTGGAGCTAAATACCATATCAAGGGTGACTTCCTGGAAGAGACTGATGTTGATGATGTTGTTGTCGCACTTGTTAATCTCGCTAAAAGAGGTGAAGTTGAAGACTATCAAAGTTCTAAAAGGAAGGAGTTCAAAAGCTTCAAAGATAATCTCGAGTCATTCTGGGACCACTTGGTCCACGAGTGTCAACATGGGCCTTTATTTGATCAGGTGTTATTTGATAAATGTGTGGACTACATAATTGCATTATCATGTACTCCTCCGAGGGTTTATCGTCAAGTAGCTTCATTGATGGGTCTACAACTTGTTACATCTTTCATTGGTGTTGCCAAAATGCTTGGTGTTCAACGTGAAACTACTCGTAGACAATTAGATGCTGAAAAGAAGAAACGAGCTGAGGGACCTCTTGTAGAGTCTTTAAATAAAAGGTTTTCTATGACTCATGAAAATATTACAGTGTTGGAGGAAATGATGCGCAAGATTTTTACGGGGTTATTTGTGCATCGTTATCGTGATATTGATCCAAACATCAGAATGTCGTGCATACAATCATTAGGAGTATGGATTTTGTCCTACCCATCACTATTTTTGCAGGATTTATACTTAAAGTATCTTGGGTGGACATTGAATGACAAAAATGCTGGAGTCAGAAAAGTTTCTGTTCTTGCGTTGCAGAATCTTTATGAGGTGGACGATAATGTGCCAACACTTAGTCTTTTCACTGAGAGGTTTTCTAATCGGATGATTGAATTGGCAGATGACATTGATGTCTCTGTGGCTGTGTGTGCCATAGGACTTGTTAAACAACTGCTAAGACATCAACTTTTAGCGGACGATGACTTAGGTCCCCTTTATGATTTACTGATTGATGATCCACCAGAGATCAGACATGCCATAGGAGCATTAGTGTATGATCACTTGATTGCTCAGAAGTTCACTAGCTCCCAATCTTCTCGGAGAGGTGATGGCAATAGTTCTTCTGAGGTTCATCTTGGCAGAATGTTGCAAATCCTGAGAGAGTTCTCAACGGATCCGATATTAAGTATCTATGTTGTCGATGATGTTTGGGAATATATGAACGCCATGAAGGACTGGAAGTGCATTATTTCCAGGCTCCTAGATGAAAATCCAAGAACTGAGCTTACTGATGAGGATGCCACAAACTTGGTTCGTCTCCTTTCTGCATCTATCAAAAAGGCAGTTGGTGAAAGGATTGTTCCTGCCACAGATAATCGGAAGCAGTACTTCAGTAAAGCTCAAAAGGTTCCTGCCCAAGTTGCATTCTCAAGCTTCCCATACTCATCAATTCAAGTACTCTGTTTTCTCAGTTCTGAACTCGAAGGTGGAATTTTGAGAGGAGTACCAAGCCATAGCTTGAGTTTTCCTTCTCAGAAGAAAGGAAAGTCAGCCATTGAATCCCCTTTCAGTGTAAGTAGCGAGGAAGTTGATCATTTCGAAAAGTTGGCCGAGAATGAGAGGAAGAGACAAATTGAACCAGTGGAGGCAGATCTGAATGCTTTGTTTCAGAGTGAGGAAGATCTGGTTGATGTTTTGACCTTGGATAATCTATCTCAAGGTCATTCTTGTGGTATCCCTGGACATCTGAAGTCACTGGTAGCAGAATACAATATTGTTTTTGGTTGA

Coding sequence (CDS)

ATGGAGGGTGCTGCTGCTGCTCCTATTTCTTCTGGACTGGCCACTCGCCGCTCGAAAAGGACTCGGGCTCAGACTGTACCCGCTGAAGTTCAACCTACCAATGCTGATGGTGGTGGTGTCGACAACAATGACAGGACCAGCGATGCTAGCGGCCAGGCCGACCGAGATAGCTCACCTGAAAACTTTGAAGAGTCTCGGCCGCCTAGAACTAAGCGGAACCGATTGGAAGGCACTTCGAATGCTGCACATGAAGTCTCCGAGCAGAGTCTGATTGATGTTATAAAAGGAAATGGGAAATTTATTCCTCAAGTTGTTAAGCGTTGGGTGGAGAGGTATGAAAAAGATCCAAAAACTTCAATGGTCGAGCTTCTGGCAATGCTGTTTGAGGCATGTGGAGCTAAATACCATATCAAGGGTGACTTCCTGGAAGAGACTGATGTTGATGATGTTGTTGTCGCACTTGTTAATCTCGCTAAAAGAGGTGAAGTTGAAGACTATCAAAGTTCTAAAAGGAAGGAGTTCAAAAGCTTCAAAGATAATCTCGAGTCATTCTGGGACCACTTGGTCCACGAGTGTCAACATGGGCCTTTATTTGATCAGGTGTTATTTGATAAATGTGTGGACTACATAATTGCATTATCATGTACTCCTCCGAGGGTTTATCGTCAAGTAGCTTCATTGATGGGTCTACAACTTGTTACATCTTTCATTGGTGTTGCCAAAATGCTTGGTGTTCAACGTGAAACTACTCGTAGACAATTAGATGCTGAAAAGAAGAAACGAGCTGAGGGACCTCTTGTAGAGTCTTTAAATAAAAGGTTTTCTATGACTCATGAAAATATTACAGTGTTGGAGGAAATGATGCGCAAGATTTTTACGGGGTTATTTGTGCATCGTTATCGTGATATTGATCCAAACATCAGAATGTCGTGCATACAATCATTAGGAGTATGGATTTTGTCCTACCCATCACTATTTTTGCAGGATTTATACTTAAAGTATCTTGGGTGGACATTGAATGACAAAAATGCTGGAGTCAGAAAAGTTTCTGTTCTTGCGTTGCAGAATCTTTATGAGGTGGACGATAATGTGCCAACACTTAGTCTTTTCACTGAGAGGTTTTCTAATCGGATGATTGAATTGGCAGATGACATTGATGTCTCTGTGGCTGTGTGTGCCATAGGACTTGTTAAACAACTGCTAAGACATCAACTTTTAGCGGACGATGACTTAGGTCCCCTTTATGATTTACTGATTGATGATCCACCAGAGATCAGACATGCCATAGGAGCATTAGTGTATGATCACTTGATTGCTCAGAAGTTCACTAGCTCCCAATCTTCTCGGAGAGGTGATGGCAATAGTTCTTCTGAGGTTCATCTTGGCAGAATGTTGCAAATCCTGAGAGAGTTCTCAACGGATCCGATATTAAGTATCTATGTTGTCGATGATGTTTGGGAATATATGAACGCCATGAAGGACTGGAAGTGCATTATTTCCAGGCTCCTAGATGAAAATCCAAGAACTGAGCTTACTGATGAGGATGCCACAAACTTGGTTCGTCTCCTTTCTGCATCTATCAAAAAGGCAGTTGGTGAAAGGATTGTTCCTGCCACAGATAATCGGAAGCAGTACTTCAGTAAAGCTCAAAAGGTTCCTGCCCAAGTTGCATTCTCAAGCTTCCCATACTCATCAATTCAAGTACTCTGTTTTCTCAGTTCTGAACTCGAAGGTGGAATTTTGAGAGGAGTACCAAGCCATAGCTTGAGTTTTCCTTCTCAGAAGAAAGGAAAGTCAGCCATTGAATCCCCTTTCAGTGTAAGTAGCGAGGAAGTTGATCATTTCGAAAAGTTGGCCGAGAATGAGAGGAAGAGACAAATTGAACCAGTGGAGGCAGATCTGAATGCTTTGTTTCAGAGTGAGGAAGATCTGGTTGATGTTTTGACCTTGGATAATCTATCTCAAGGTCATTCTTGTGGTATCCCTGGACATCTGAAGTCACTGGTAGCAGAATACAATATTGTTTTTGGTTGA

Protein sequence

MEGAAAAPISSGLATRRSKRTRAQTVPAEVQPTNADGGGVDNNDRTSDASGQADRDSSPENFEESRPPRTKRNRLEGTSNAAHEVSEQSLIDVIKGNGKFIPQVVKRWVERYEKDPKTSMVELLAMLFEACGAKYHIKGDFLEETDVDDVVVALVNLAKRGEVEDYQSSKRKEFKSFKDNLESFWDHLVHECQHGPLFDQVLFDKCVDYIIALSCTPPRVYRQVASLMGLQLVTSFIGVAKMLGVQRETTRRQLDAEKKKRAEGPLVESLNKRFSMTHENITVLEEMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPSLFLQDLYLKYLGWTLNDKNAGVRKVSVLALQNLYEVDDNVPTLSLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLLADDDLGPLYDLLIDDPPEIRHAIGALVYDHLIAQKFTSSQSSRRGDGNSSSEVHLGRMLQILREFSTDPILSIYVVDDVWEYMNAMKDWKCIISRLLDENPRTELTDEDATNLVRLLSASIKKAVGERIVPATDNRKQYFSKAQKVPAQVAFSSFPYSSIQVLCFLSSELEGGILRGVPSHSLSFPSQKKGKSAIESPFSVSSEEVDHFEKLAENERKRQIEPVEADLNALFQSEEDLVDVLTLDNLSQGHSCGIPGHLKSLVAEYNIVFG*
Homology
[Close]
BLAST of MELO3C015235 vs. Swiss-Prot
Match: SCC3_ARATH (Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2)

HSP 1 Score: 367.9 bits (943), Expect = 1.1e-100
Identity = 178/281 (63.35%), Postives = 225/281 (80.07%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +E+FE+NR+DITVA+MKNYP LLRKF+ADKAKV SLVEII+ M LELYSLKRQEQ++K  
Sbjct: 531 REIFENNRKDITVAMMKNYPQLLRKFMADKAKVSSLVEIIIFMKLELYSLKRQEQSFKAA 590

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           ++L+K+AFFKHG+KEALRSC+KAI  C ++S+GELQDFSR KLK+LEDEL  K+  A+RE
Sbjct: 591 VRLIKDAFFKHGEKEALRSCVKAITFCASESKGELQDFSRGKLKDLEDELLDKITSAIRE 650

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           ++DG DEYSLLVNLKRLYE QLS+PV +ES++ +I + L  FR++D+EV+CFLLLN+++ 
Sbjct: 651 VKDGNDEYSLLVNLKRLYELQLSKPVLVESMFDEIALTLHNFRNLDEEVICFLLLNMHMY 710

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 246
           LAW LHSIIN E +S  SLSSL++KR+ L E L  +LN   E  K GNQL+ R+C ILAE
Sbjct: 711 LAWYLHSIINCEAISEASLSSLISKRDTLFEELSYFLNGIEESKKYGNQLSNRICAILAE 770

Query: 247 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
            W LF+K NY S KLERLGYCPD+  ++ FW+LC    + S
Sbjct: 771 TWCLFRKSNYDSGKLERLGYCPDSVFLEKFWKLCAEMFNTS 811

[Close]
BLAST of MELO3C015235 vs. Swiss-Prot
Match: STAG1_HUMAN (Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3)

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-12
Identity = 49/191 (25.65%), Postives = 95/191 (49.74%), Query Frame = 1 

Query: 13  NRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNVLQLMKE 72
           +R  +T   +   P+LL K+ AD  KV +L++I  + +LE+YS  R E++   +L+ +K 
Sbjct: 563 DRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKF 622

Query: 73  AFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRELEDGGD 132
              KH + + L +C K  ++ C++ +  +Q+       +L DE   +  H++ +L   G+
Sbjct: 623 VVEKHVESDVLEACSKTYSILCSE-EYTIQNRVDIARSQLIDEFVDRFNHSVEDLLQEGE 682

Query: 133 E------YSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQ---KFRSMDDEVVCFLLLNL 192
           E      Y++L  LKRL  F  +  +    ++G+   +L+   +  +M +++V   L   
Sbjct: 683 EADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGIEHGAMPEQIVVQALQCS 742

Query: 193 YLDLAWSLHSI 195
           +  + W L  I
Sbjct: 743 HYSILWQLVKI 752

[Close]
BLAST of MELO3C015235 vs. Swiss-Prot
Match: STAG1_MOUSE (Cohesin subunit SA-1 OS=Mus musculus GN=Stag1 PE=1 SV=3)

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-12
Identity = 49/191 (25.65%), Postives = 95/191 (49.74%), Query Frame = 1 

Query: 13  NRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNVLQLMKE 72
           +R  +T   +   P+LL K+ AD  KV +L++I  + +LE+YS  R E++   +L+ +K 
Sbjct: 563 DRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKF 622

Query: 73  AFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRELEDGGD 132
              KH + + L +C K  ++ C++ +  +Q+       +L DE   +  H++ +L   G+
Sbjct: 623 VVEKHVESDVLEACSKTYSILCSE-EYTIQNRVDIARSQLIDEFVDRFNHSVEDLLQEGE 682

Query: 133 E------YSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQ---KFRSMDDEVVCFLLLNL 192
           E      Y++L  LKRL  F  +  +    ++G+   +L+   +  +M +++V   L   
Sbjct: 683 EADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGIEHGAMPEQIVVQALQCS 742

Query: 193 YLDLAWSLHSI 195
           +  + W L  I
Sbjct: 743 HYSILWQLVKI 752

[Close]
BLAST of MELO3C015235 vs. Swiss-Prot
Match: STAG1_XENLA (Cohesin subunit SA-1 OS=Xenopus laevis GN=stag1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.8e-12
Identity = 50/190 (26.32%), Postives = 93/190 (48.95%), Query Frame = 1 

Query: 26  PILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNVLQLMKEAFFKHGDKEALRS 85
           P+LL K+ AD  KV +L++I  + +LELYS  R E++  ++L+ ++    KH + + L +
Sbjct: 583 PVLLSKYSADAEKVANLLQIPQYFDLELYSTGRMEKHLDSLLKQIRFVVEKHIESDVLEA 642

Query: 86  CMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRELEDGGDE------YSLLVN 145
           C K  ++ C++ +  +Q+       +L DEL  +  HA+ EL    +E      Y+++ +
Sbjct: 643 CSKTYSILCSE-EYTIQNRVEIAHSQLIDELADRFSHAVEELLQEAEEADEDEIYNVMAS 702

Query: 146 LKRLYEFQLSRPVPMESIYGDIMMILQ---KFRSMDDEVVCFLLLNLYLDLAWSLHSIIN 205
           LKRL  F  +  +     +G+   +L+   +   M +++V   L   +  + W L  I  
Sbjct: 703 LKRLTCFHNAHDLTKWDFFGNCYRLLRAGIEHEGMMEQIVVQALQCSHYSILWQLVKITE 762

Query: 206 SETVSIESLS 207
                 E L+
Sbjct: 763 GNPSKEEMLA 771

[Close]
BLAST of MELO3C015235 vs. Swiss-Prot
Match: STAG3_HUMAN (Cohesin subunit SA-3 OS=Homo sapiens GN=STAG3 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 4.9e-11
Identity = 60/231 (25.97%), Postives = 106/231 (45.89%), Query Frame = 1 

Query: 2   LVNENQEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQ 61
           L ++ ++    +R  +T  ++   P LL KF AD  KV  L++++   +L +Y   R E+
Sbjct: 561 LTSKERKTQADDRVKLTEHLIPLLPQLLAKFSADAEKVTPLLQLLSCFDLHIYCTGRLEK 620

Query: 62  NYKNVLQLMKEAFFKHGDKEALRSCMKAINLCCTD--SQGELQDFSRNKLKELEDELFAK 121
           + +  LQ ++E   KH +   L +   A+ L C    +     DF+R++L +L  + F +
Sbjct: 621 HLELFLQQLQEVVVKHAEPAVLEAGAHALYLLCNPEFTFFSRADFARSQLVDLLTDRFQQ 680

Query: 122 LKHAMRELE--DGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQK---FRSMDDE 181
               + +    D  + Y+L   LKRL  F  +  +    +Y     +LQK      +  +
Sbjct: 681 ELEELLQSSFLDEDEVYNLAATLKRLSAFYNTHDLTRWELYEPCCQLLQKAVDTGEVPHQ 740

Query: 182 VVCFLLLNLYLDLAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLND 226
           V+   L  +Y  + W+L  I  S+  S + LSSL ++  A  E     L+D
Sbjct: 741 VILPALTLVYFSILWTLTHISKSD-ASQKQLSSLRDRMVAFCELCQSCLSD 790

[Close]
BLAST of MELO3C015235 vs. TrEMBL
Match: A0A061DS32_THECC (Sister-chromatid cohesion protein 3 OS=Theobroma cacao GN=TCM_004506 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 8.4e-111
Identity = 204/284 (71.83%), Postives = 244/284 (85.92%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +E+FE+NRRDITVA+MKNYP+LLRKF+ADKAK+ SLVEIIV+MNLELYSLKRQEQ++K V
Sbjct: 547 KEIFENNRRDITVAMMKNYPLLLRKFMADKAKISSLVEIIVYMNLELYSLKRQEQSFKTV 606

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           LQL+K+AFFKHG+K+ALRSC+KAI  C T+S+GELQDF+RNKLK+LEDEL  KLK A++E
Sbjct: 607 LQLIKDAFFKHGEKDALRSCVKAIKFCSTESRGELQDFARNKLKDLEDELLDKLKSAIKE 666

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           + DG DEYSL VNLKRLYE QLSRPV +ES+YGD + IL  FR++DDEVV FLLLN+YLD
Sbjct: 667 VIDGEDEYSLFVNLKRLYELQLSRPVSIESLYGDSITILHSFRNLDDEVVSFLLLNMYLD 726

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEV---CKSGNQLAYRVCTI 246
           +AWSLHSIINSE V+  SLSSLL+KR+ LLE L+ +LN P EV    KSGNQLA RVCTI
Sbjct: 727 VAWSLHSIINSEIVTEGSLSSLLSKRDTLLEELEYFLNAPPEVREGGKSGNQLACRVCTI 786

Query: 247 LAELWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LA++W LF+  N+S TKLERLGYCPD S +  FWRLCE QL+IS
Sbjct: 787 LADVWCLFRNTNFSPTKLERLGYCPDVSILYKFWRLCELQLNIS 830

[Close]
BLAST of MELO3C015235 vs. TrEMBL
Match: A0A0D2SCP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.2e-110
Identity = 201/284 (70.77%), Postives = 241/284 (84.86%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +E  E+NRRD+T+A+MKNYP+LLRKF+ADKAK+ SLVEIIV+MNLELYSLKRQEQN++  
Sbjct: 549 KEAIENNRRDLTIAMMKNYPLLLRKFMADKAKISSLVEIIVYMNLELYSLKRQEQNFRTT 608

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           L L+K+AFFKHG+K+ALRSC+KAI  C T+S+GELQDF+RNKLKELEDEL  KLK A +E
Sbjct: 609 LLLIKDAFFKHGEKDALRSCVKAIKFCSTESRGELQDFARNKLKELEDELLDKLKSATKE 668

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           + DG DEYSLLVNLKRLYE QLSRP+ ++  YGD + IL  FR++DDEVV FLLLN+YLD
Sbjct: 669 VIDGEDEYSLLVNLKRLYELQLSRPISIDEFYGDSITILHSFRNLDDEVVSFLLLNMYLD 728

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEV---CKSGNQLAYRVCTI 246
           +AWSLHSIINSETVS  SLSSLL+KR+ LLE L+ +LN P EV    KSGNQLA RVCTI
Sbjct: 729 VAWSLHSIINSETVSEGSLSSLLSKRDTLLEELEYFLNAPPEVGEGSKSGNQLACRVCTI 788

Query: 247 LAELWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LA++W LF+K N+SSTKLERLGYCPD S ++ FW LCE+QL IS
Sbjct: 789 LADVWCLFRKTNFSSTKLERLGYCPDVSILQKFWTLCEKQLKIS 832

[Close]
BLAST of MELO3C015235 vs. TrEMBL
Match: A0A0D2SJE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.2e-110
Identity = 201/284 (70.77%), Postives = 241/284 (84.86%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +E  E+NRRD+T+A+MKNYP+LLRKF+ADKAK+ SLVEIIV+MNLELYSLKRQEQN++  
Sbjct: 429 KEAIENNRRDLTIAMMKNYPLLLRKFMADKAKISSLVEIIVYMNLELYSLKRQEQNFRTT 488

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           L L+K+AFFKHG+K+ALRSC+KAI  C T+S+GELQDF+RNKLKELEDEL  KLK A +E
Sbjct: 489 LLLIKDAFFKHGEKDALRSCVKAIKFCSTESRGELQDFARNKLKELEDELLDKLKSATKE 548

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           + DG DEYSLLVNLKRLYE QLSRP+ ++  YGD + IL  FR++DDEVV FLLLN+YLD
Sbjct: 549 VIDGEDEYSLLVNLKRLYELQLSRPISIDEFYGDSITILHSFRNLDDEVVSFLLLNMYLD 608

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEV---CKSGNQLAYRVCTI 246
           +AWSLHSIINSETVS  SLSSLL+KR+ LLE L+ +LN P EV    KSGNQLA RVCTI
Sbjct: 609 VAWSLHSIINSETVSEGSLSSLLSKRDTLLEELEYFLNAPPEVGEGSKSGNQLACRVCTI 668

Query: 247 LAELWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LA++W LF+K N+SSTKLERLGYCPD S ++ FW LCE+QL IS
Sbjct: 669 LADVWCLFRKTNFSSTKLERLGYCPDVSILQKFWTLCEKQLKIS 712

[Close]
BLAST of MELO3C015235 vs. TrEMBL
Match: A0A0D2P8C2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.2e-110
Identity = 201/284 (70.77%), Postives = 241/284 (84.86%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +E  E+NRRD+T+A+MKNYP+LLRKF+ADKAK+ SLVEIIV+MNLELYSLKRQEQN++  
Sbjct: 549 KEAIENNRRDLTIAMMKNYPLLLRKFMADKAKISSLVEIIVYMNLELYSLKRQEQNFRTT 608

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           L L+K+AFFKHG+K+ALRSC+KAI  C T+S+GELQDF+RNKLKELEDEL  KLK A +E
Sbjct: 609 LLLIKDAFFKHGEKDALRSCVKAIKFCSTESRGELQDFARNKLKELEDELLDKLKSATKE 668

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           + DG DEYSLLVNLKRLYE QLSRP+ ++  YGD + IL  FR++DDEVV FLLLN+YLD
Sbjct: 669 VIDGEDEYSLLVNLKRLYELQLSRPISIDEFYGDSITILHSFRNLDDEVVSFLLLNMYLD 728

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEV---CKSGNQLAYRVCTI 246
           +AWSLHSIINSETVS  SLSSLL+KR+ LLE L+ +LN P EV    KSGNQLA RVCTI
Sbjct: 729 VAWSLHSIINSETVSEGSLSSLLSKRDTLLEELEYFLNAPPEVGEGSKSGNQLACRVCTI 788

Query: 247 LAELWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LA++W LF+K N+SSTKLERLGYCPD S ++ FW LCE+QL IS
Sbjct: 789 LADVWCLFRKTNFSSTKLERLGYCPDVSILQKFWTLCEKQLKIS 832

[Close]
BLAST of MELO3C015235 vs. TrEMBL
Match: A0A0D2QS27_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.2e-110
Identity = 201/284 (70.77%), Postives = 241/284 (84.86%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +E  E+NRRD+T+A+MKNYP+LLRKF+ADKAK+ SLVEIIV+MNLELYSLKRQEQN++  
Sbjct: 397 KEAIENNRRDLTIAMMKNYPLLLRKFMADKAKISSLVEIIVYMNLELYSLKRQEQNFRTT 456

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           L L+K+AFFKHG+K+ALRSC+KAI  C T+S+GELQDF+RNKLKELEDEL  KLK A +E
Sbjct: 457 LLLIKDAFFKHGEKDALRSCVKAIKFCSTESRGELQDFARNKLKELEDELLDKLKSATKE 516

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           + DG DEYSLLVNLKRLYE QLSRP+ ++  YGD + IL  FR++DDEVV FLLLN+YLD
Sbjct: 517 VIDGEDEYSLLVNLKRLYELQLSRPISIDEFYGDSITILHSFRNLDDEVVSFLLLNMYLD 576

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEV---CKSGNQLAYRVCTI 246
           +AWSLHSIINSETVS  SLSSLL+KR+ LLE L+ +LN P EV    KSGNQLA RVCTI
Sbjct: 577 VAWSLHSIINSETVSEGSLSSLLSKRDTLLEELEYFLNAPPEVGEGSKSGNQLACRVCTI 636

Query: 247 LAELWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LA++W LF+K N+SSTKLERLGYCPD S ++ FW LCE+QL IS
Sbjct: 637 LADVWCLFRKTNFSSTKLERLGYCPDVSILQKFWTLCEKQLKIS 680

[Close]
BLAST of MELO3C015235 vs. TAIR10
Match: AT2G47980.1 (AT2G47980.1 sister-chromatid cohesion protein 3)

HSP 1 Score: 367.9 bits (943), Expect = 6.4e-102
Identity = 178/281 (63.35%), Postives = 225/281 (80.07%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +E+FE+NR+DITVA+MKNYP LLRKF+ADKAKV SLVEII+ M LELYSLKRQEQ++K  
Sbjct: 531 REIFENNRKDITVAMMKNYPQLLRKFMADKAKVSSLVEIIIFMKLELYSLKRQEQSFKAA 590

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           ++L+K+AFFKHG+KEALRSC+KAI  C ++S+GELQDFSR KLK+LEDEL  K+  A+RE
Sbjct: 591 VRLIKDAFFKHGEKEALRSCVKAITFCASESKGELQDFSRGKLKDLEDELLDKITSAIRE 650

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           ++DG DEYSLLVNLKRLYE QLS+PV +ES++ +I + L  FR++D+EV+CFLLLN+++ 
Sbjct: 651 VKDGNDEYSLLVNLKRLYELQLSKPVLVESMFDEIALTLHNFRNLDEEVICFLLLNMHMY 710

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 246
           LAW LHSIIN E +S  SLSSL++KR+ L E L  +LN   E  K GNQL+ R+C ILAE
Sbjct: 711 LAWYLHSIINCEAISEASLSSLISKRDTLFEELSYFLNGIEESKKYGNQLSNRICAILAE 770

Query: 247 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
            W LF+K NY S KLERLGYCPD+  ++ FW+LC    + S
Sbjct: 771 TWCLFRKSNYDSGKLERLGYCPDSVFLEKFWKLCAEMFNTS 811

[Close]
BLAST of MELO3C015235 vs. NCBI nr
Match: gi|659099245|ref|XP_008450503.1| (PREDICTED: sister-chromatid cohesion protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 559.3 bits (1440), Expect = 4.2e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +EVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV
Sbjct: 551 KEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 610

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE
Sbjct: 611 LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 670

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD
Sbjct: 671 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 730

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 246
           LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE
Sbjct: 731 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 790

Query: 247 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS
Sbjct: 791 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 831

[Close]
BLAST of MELO3C015235 vs. NCBI nr
Match: gi|659099250|ref|XP_008450504.1| (PREDICTED: sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo])

HSP 1 Score: 559.3 bits (1440), Expect = 4.2e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +EVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV
Sbjct: 551 KEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 610

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE
Sbjct: 611 LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 670

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD
Sbjct: 671 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 730

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 246
           LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE
Sbjct: 731 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 790

Query: 247 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS
Sbjct: 791 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 831

[Close]
BLAST of MELO3C015235 vs. NCBI nr
Match: gi|659099252|ref|XP_008450505.1| (PREDICTED: sister-chromatid cohesion protein 3 isoform X3 [Cucumis melo])

HSP 1 Score: 559.3 bits (1440), Expect = 4.2e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +EVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV
Sbjct: 551 KEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 610

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE
Sbjct: 611 LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 670

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD
Sbjct: 671 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 730

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 246
           LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE
Sbjct: 731 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 790

Query: 247 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS
Sbjct: 791 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 831

[Close]
BLAST of MELO3C015235 vs. NCBI nr
Match: gi|659099254|ref|XP_008450507.1| (PREDICTED: sister-chromatid cohesion protein 3 isoform X4 [Cucumis melo])

HSP 1 Score: 559.3 bits (1440), Expect = 4.2e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +EVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV
Sbjct: 551 KEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 610

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE
Sbjct: 611 LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 670

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD
Sbjct: 671 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 730

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 246
           LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE
Sbjct: 731 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 790

Query: 247 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS
Sbjct: 791 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 831

[Close]
BLAST of MELO3C015235 vs. NCBI nr
Match: gi|778662200|ref|XP_011659512.1| (PREDICTED: sister-chromatid cohesion protein 3 [Cucumis sativus])

HSP 1 Score: 547.4 bits (1409), Expect = 1.7e-152
Identity = 271/281 (96.44%), Postives = 279/281 (99.29%), Query Frame = 1 

Query: 7   QEVFESNRRDITVAIMKNYPILLRKFVADKAKVPSLVEIIVHMNLELYSLKRQEQNYKNV 66
           +EVFESNRRDITVAIMKNYP+LLRKF+ADKAKVPSLVEII+HMNLELYSLKRQEQNYKNV
Sbjct: 553 KEVFESNRRDITVAIMKNYPVLLRKFMADKAKVPSLVEIIIHMNLELYSLKRQEQNYKNV 612

Query: 67  LQLMKEAFFKHGDKEALRSCMKAINLCCTDSQGELQDFSRNKLKELEDELFAKLKHAMRE 126
           LQLMKEAFFKHGDKEALRSCMKAINLCCT+S+GELQDFSRNKLKELEDELFAKLKHAMRE
Sbjct: 613 LQLMKEAFFKHGDKEALRSCMKAINLCCTESRGELQDFSRNKLKELEDELFAKLKHAMRE 672

Query: 127 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLD 186
           LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYL 
Sbjct: 673 LEDGGDEYSLLVNLKRLYEFQLSRPVPMESIYGDIMMILQKFRSMDDEVVCFLLLNLYLH 732

Query: 187 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDLYLNDPTEVCKSGNQLAYRVCTILAE 246
           LAWSLHSIINSETVSIESLSSLLNKRNALLEHLD YLNDPTEVCKSGNQLAYRVCTILAE
Sbjct: 733 LAWSLHSIINSETVSIESLSSLLNKRNALLEHLDQYLNDPTEVCKSGNQLAYRVCTILAE 792

Query: 247 LWFLFKKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 288
           +WFLF+KENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS
Sbjct: 793 MWFLFRKENYSSTKLERLGYCPDASTVKNFWRLCERQLSIS 833

The following BLAST results are available for this feature:
BLAST of MELO3C015235 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SCC3_ARATH1.1e-10063.35Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2[more]
STAG1_HUMAN3.4e-1225.65Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3[more]
STAG1_MOUSE3.4e-1225.65Cohesin subunit SA-1 OS=Mus musculus GN=Stag1 PE=1 SV=3[more]
STAG1_XENLA5.8e-1226.32Cohesin subunit SA-1 OS=Xenopus laevis GN=stag1 PE=1 SV=1[more]
STAG3_HUMAN4.9e-1125.97Cohesin subunit SA-3 OS=Homo sapiens GN=STAG3 PE=1 SV=2[more]
BLAST of MELO3C015235 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061DS32_THECC8.4e-11171.83Sister-chromatid cohesion protein 3 OS=Theobroma cacao GN=TCM_004506 PE=4 SV=1[more]
A0A0D2SCP1_GOSRA3.2e-11070.77Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1[more]
A0A0D2SJE3_GOSRA3.2e-11070.77Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1[more]
A0A0D2P8C2_GOSRA3.2e-11070.77Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1[more]
A0A0D2QS27_GOSRA3.2e-11070.77Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132500 PE=4 SV=1[more]
BLAST of MELO3C015235 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47980.16.4e-10263.35 sister-chromatid cohesion protein 3[more]
BLAST of MELO3C015235 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099245|ref|XP_008450503.1|4.2e-15699.64PREDICTED: sister-chromatid cohesion protein 3 isoform X1 [Cucumis melo][more]
gi|659099250|ref|XP_008450504.1|4.2e-15699.64PREDICTED: sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo][more]
gi|659099252|ref|XP_008450505.1|4.2e-15699.64PREDICTED: sister-chromatid cohesion protein 3 isoform X3 [Cucumis melo][more]
gi|659099254|ref|XP_008450507.1|4.2e-15699.64PREDICTED: sister-chromatid cohesion protein 3 isoform X4 [Cucumis melo][more]
gi|778662200|ref|XP_011659512.1|1.7e-15296.44PREDICTED: sister-chromatid cohesion protein 3 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR013721STAG
IPR016024ARM-type_fold
IPR020839SCD
IPR011989ARM-like
IPR013721STAG
IPR016024ARM-type_fold
IPR020839SCD
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005488binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0007129 synapsis
biological_process GO:0006396 RNA processing
biological_process GO:0033044 regulation of chromosome organization
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0051455 attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0010638 positive regulation of organelle organization
biological_process GO:0007067 mitotic nuclear division
biological_process GO:0051754 meiotic sister chromatid cohesion, centromeric
biological_process GO:0009630 gravitropism
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006325 chromatin organization
cellular_component GO:0005694 chromosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015235T3MELO3C015235T3mRNA
MELO3C015235T2MELO3C015235T2mRNA
MELO3C015235T1MELO3C015235T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 284..434
score: 8.
IPR013721STAGPFAMPF08514STAGcoord: 165..271
score: 6.4
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 288..483
score: 1.04
IPR020839Stromalin conservative domainPROFILEPS51425SCDcoord: 296..381
score: 32
NoneNo IPR availablePANTHERPTHR11199STROMAL ANTIGENcoord: 55..551
score: 2.8E