MELO3C015229 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015229
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMyb transcription factor
Locationchr2 : 45075 .. 45311 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGGTCGGAATTTGTGGGGAATAATCCATTTATACTGCAAAATCAAGAAGCTCAATCTCAAACTCAAACAGATGAATCAATGTATGTAGAGACTACCGCGGCGGAAACAGGGTTTATAACAGAGGGCGGTGGCGGTGGCGGTGGGTGGCAGAGGCAACAACCTTCCTCCGATGCTGCTGTATATAACAAACACCTCCATACTCTTACTGTTTCTTTTGGAAATACCCTTTAA

mRNA sequence

ATGAAATGGTCGGAATTTGTGGGGAATAATCCATTTATACTGCAAAATCAAGAAGCTCAATCTCAAACTCAAACAGATGAATCAATGTATGTAGAGACTACCGCGGCGGAAACAGGGTTTATAACAGAGGGCGGTGGCGGTGGCGGTGGGTGGCAGAGGCAACAACCTTCCTCCGATGCTGCTGTATATAACAAACACCTCCATACTCTTACTGTTTCTTTTGGAAATACCCTTTAA

Coding sequence (CDS)

ATGAAATGGTCGGAATTTGTGGGGAATAATCCATTTATACTGCAAAATCAAGAAGCTCAATCTCAAACTCAAACAGATGAATCAATGTATGTAGAGACTACCGCGGCGGAAACAGGGTTTATAACAGAGGGCGGTGGCGGTGGCGGTGGGTGGCAGAGGCAACAACCTTCCTCCGATGCTGCTGTATATAACAAACACCTCCATACTCTTACTGTTTCTTTTGGAAATACCCTTTAA

Protein sequence

MKWSEFVGNNPFILQNQEAQSQTQTDESMYVETTAAETGFITEGGGGGGGWQRQQPSSDAAVYNKHLHTLTVSFGNTL*
Homology
[Close]
BLAST of MELO3C015229 vs. TrEMBL
Match: A0A0A0M1F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561370 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-36
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 1 

Query: 1   MKWSEFVGNNPFILQNQEAQSQTQTDESMYVETTAAETGFITEGGGGGGGWQRQQPSSDA 60
           MKWSEFVGNNPFILQNQEAQSQTQTD+SMYVE+TAAETGFI EGGGGGGGWQRQQPSSDA
Sbjct: 264 MKWSEFVGNNPFILQNQEAQSQTQTDDSMYVESTAAETGFIVEGGGGGGGWQRQQPSSDA 323

Query: 61  AVYNKHLHTLTVSFGNTL 79
           AVYNKHLHTLTVSFGNTL
Sbjct: 324 AVYNKHLHTLTVSFGNTL 341

[Close]
BLAST of MELO3C015229 vs. NCBI nr
Match: gi|659099227|ref|XP_008450495.1| (PREDICTED: transcription factor MYB86 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 5.9e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1   MKWSEFVGNNPFILQNQEAQSQTQTDESMYVETTAAETGFITEGGGGGGGWQRQQPSSDA 60
           MKWSEFVGNNPFILQNQEAQSQTQTDESMYVETTAAETGFITEGGGGGGGWQRQQPSSDA
Sbjct: 291 MKWSEFVGNNPFILQNQEAQSQTQTDESMYVETTAAETGFITEGGGGGGGWQRQQPSSDA 350

Query: 61  AVYNKHLHTLTVSFGNTL 79
           AVYNKHLHTLTVSFGNTL
Sbjct: 351 AVYNKHLHTLTVSFGNTL 368

[Close]
BLAST of MELO3C015229 vs. NCBI nr
Match: gi|449435962|ref|XP_004135763.1| (PREDICTED: myb-related protein 308 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-36
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 1 

Query: 1   MKWSEFVGNNPFILQNQEAQSQTQTDESMYVETTAAETGFITEGGGGGGGWQRQQPSSDA 60
           MKWSEFVGNNPFILQNQEAQSQTQTD+SMYVE+TAAETGFI EGGGGGGGWQRQQPSSDA
Sbjct: 293 MKWSEFVGNNPFILQNQEAQSQTQTDDSMYVESTAAETGFIVEGGGGGGGWQRQQPSSDA 352

Query: 61  AVYNKHLHTLTVSFGNTL 79
           AVYNKHLHTLTVSFGNTL
Sbjct: 353 AVYNKHLHTLTVSFGNTL 370

[Close]
BLAST of MELO3C015229 vs. NCBI nr
Match: gi|700210910|gb|KGN66006.1| (hypothetical protein Csa_1G561370 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-36
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 1 

Query: 1   MKWSEFVGNNPFILQNQEAQSQTQTDESMYVETTAAETGFITEGGGGGGGWQRQQPSSDA 60
           MKWSEFVGNNPFILQNQEAQSQTQTD+SMYVE+TAAETGFI EGGGGGGGWQRQQPSSDA
Sbjct: 264 MKWSEFVGNNPFILQNQEAQSQTQTDDSMYVESTAAETGFIVEGGGGGGGWQRQQPSSDA 323

Query: 61  AVYNKHLHTLTVSFGNTL 79
           AVYNKHLHTLTVSFGNTL
Sbjct: 324 AVYNKHLHTLTVSFGNTL 341

The following BLAST results are available for this feature:
BLAST of MELO3C015229 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M1F2_CUCSA1.0e-3696.15Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561370 PE=4 SV=1[more]
BLAST of MELO3C015229 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099227|ref|XP_008450495.1|5.9e-38100.00PREDICTED: transcription factor MYB86 [Cucumis melo][more]
gi|449435962|ref|XP_004135763.1|1.5e-3696.15PREDICTED: myb-related protein 308 [Cucumis sativus][more]
gi|700210910|gb|KGN66006.1|1.5e-3696.15hypothetical protein Csa_1G561370 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0007275 multicellular organism development
biological_process GO:0050794 regulation of cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU55135melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015229T1MELO3C015229T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55135MU55135transcribed_cluster