MELO3C015138.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015138.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Unknown protein
Location	chr02 : 7457983 .. 7458444 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGGTGTTCAAATTAGGAGTCGTCGATTTAAAACTACTCCGTCCCGATGTCCCTATCGTCTACCATTTGAAACAATTCAGGTACCGTCTTCTGATCCTTCTGAGGAGTCTTTGCATGTTGATCCTGTTAGATCGTATGTTCCCGAGCATGTTAGTCATCAAGAGTCGAATTTCTCTGATATGGACTCAGATAAGAGGGATGATGTATCTCTAATTCATATTCTAAAGCATGGGGTTTTTAGTATAAAATCTCAACCAAATGTTAGTATTCCTGGTCCTTCTACTGCTAATCATCCTTCAGGTGTTCCTTTTGTTTCATTGCATTCCACGAGTAGCTTCTTTCAGGATGATATCCTCAGTTTGAATGTGGCACAACATTCAAGTGGAAATGTCTCTCAGGGTCTAGATAATGTTGATCAAGGGTCTACCCCTCACATGTTAAAAAGAATCAGTTCCTAA

mRNA sequence

ATGCATGGTGTTCAAATTAGGAGTCGTCGATTTAAAACTACTCCGTCCCGATGTCCCTATCGTCTACCATTTGAAACAATTCAGGTACCGTCTTCTGATCCTTCTGAGGAGTCTTTGCATGTTGATCCTGTTAGATCGTATGTTCCCGAGCATGTTAGTCATCAAGAGTCGAATTTCTCTGATATGGACTCAGATAAGAGGGATGATGTATCTCTAATTCATATTCTAAAGCATGGGGTTTTTAGTATAAAATCTCAACCAAATGTTAGTATTCCTGGTCCTTCTACTGCTAATCATCCTTCAGGTGTTCCTTTTGTTTCATTGCATTCCACGAGTAGCTTCTTTCAGGATGATATCCTCAGTTTGAATGTGGCACAACATTCAAGTGGAAATGTCTCTCAGGGTCTAGATAATGTTGATCAAGGGTCTACCCCTCACATGTTAAAAAGAATCAGTTCCTAA

Coding sequence (CDS)

ATGCATGGTGTTCAAATTAGGAGTCGTCGATTTAAAACTACTCCGTCCCGATGTCCCTATCGTCTACCATTTGAAACAATTCAGGTACCGTCTTCTGATCCTTCTGAGGAGTCTTTGCATGTTGATCCTGTTAGATCGTATGTTCCCGAGCATGTTAGTCATCAAGAGTCGAATTTCTCTGATATGGACTCAGATAAGAGGGATGATGTATCTCTAATTCATATTCTAAAGCATGGGGTTTTTAGTATAAAATCTCAACCAAATGTTAGTATTCCTGGTCCTTCTACTGCTAATCATCCTTCAGGTGTTCCTTTTGTTTCATTGCATTCCACGAGTAGCTTCTTTCAGGATGATATCCTCAGTTTGAATGTGGCACAACATTCAAGTGGAAATGTCTCTCAGGGTCTAGATAATGTTGATCAAGGGTCTACCCCTCACATGTTAAAAAGAATCAGTTCCTAA

Protein sequence

MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQESNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSFFQDDILSLNVAQHSSGNVSQGLDNVDQGSTPHMLKRISS

Homology

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BLAST of MELO3C015138.2 vs. NCBI nr
Match: XP_008462765.1 (PREDICTED: uncharacterized protein LOC103501050 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-09
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 1  MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQ----E 60
          MHGV++R  RFK+TPSR PY L FE  QV   D S  S+H + +   V E+V  +    +
Sbjct: 1  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSK 60

Query: 61 SNFSDMDSDKRDDVSLIHILKHGVFS 83
          S+ S+MDS++RDDV L+ +LK  +FS
Sbjct: 61 SHMSEMDSNERDDVPLVSLLKKDLFS 86

[Close]

BLAST of MELO3C015138.2 vs. NCBI nr
Match: XP_008450476.1 (PREDICTED: uncharacterized protein LOC103492069 [Cucumis melo])

HSP 1 Score: 57.0 bits (136), Expect = 6.5e-05
Identity = 44/136 (32.35%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 1   MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQ----E 60
           MHGV++R  R K+T SR P RLP E  +V   D S  SLH + V   + +++  +    E
Sbjct: 1   MHGVRMRGHRVKSTLSRRPNRLPSEKNRVALFDSSSVSLHDENVAGILADNIESEPVVSE 60

Query: 61  SNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSFFQ 120
           S+ S++DSD++DDV L            SQP+ +       +H S V  +   S     Q
Sbjct: 61  SHMSEIDSDEKDDVPL-----------ASQPSTTNKNLEQTSHSSPVRSLVQSSPPIDVQ 120

Query: 121 DDILSLNVAQHSSGNV 133
             +L  ++    S NV
Sbjct: 121 QSVLDPDLVSQPSENV 125

[Close]

BLAST of MELO3C015138.2 vs. NCBI nr
Match: XP_008465030.1 (PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo])

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 1   MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVS------- 60
           +H V+++ RRFK+TP R  YRLP+E +Q  ++   +ESL    V S V E  +       
Sbjct: 28  VHHVKVKGRRFKSTPPRKRYRLPYEKVQGEATSKLQESLRSKAV-SEVGESAAPVSPAVH 87

Query: 61  ---HQESNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS 114
                E+  SDMDSD +D+V LIH+L        ++P+  +      + P G    S+HS
Sbjct: 88  AYRASEATVSDMDSDYQDNVPLIHLL--------NKPSKPVTAERLPSDPPG----SIHS 137

[Close]

BLAST of MELO3C015138.2 vs. NCBI nr
Match: XP_008451644.1 (PREDICTED: uncharacterized protein LOC103492876 [Cucumis melo])

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04
Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 5   QIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPV----RSYVPEHV---SHQ-- 64
           ++R  RFK+TP + PYRLP E +Q  +S   +ESL  + V     S VP  +   +H+  
Sbjct: 32  RVRGHRFKSTPFQRPYRLPSEKVQGEASSRLQESLRSEVVPEVGESSVPGSLTVHAHRAF 91

Query: 65  ESNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPS 102
           E+  SDMDSD +DDV LI +LK  +  I S+   S P  S  +  S
Sbjct: 92  EAIVSDMDSDDQDDVPLIRLLKKPLGPIISEKLPSDPPDSIHSQES 137

[Close]

BLAST of MELO3C015138.2 vs. TrEMBL
Match: tr|A0A1S3CHR6|A0A1S3CHR6_CUCME (uncharacterized protein LOC103501050 OS=Cucumis melo OX=3656 GN=LOC103501050 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-09
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 1  MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQ----E 60
          MHGV++R  RFK+TPSR PY L FE  QV   D S  S+H + +   V E+V  +    +
Sbjct: 1  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSK 60

Query: 61 SNFSDMDSDKRDDVSLIHILKHGVFS 83
          S+ S+MDS++RDDV L+ +LK  +FS
Sbjct: 61 SHMSEMDSNERDDVPLVSLLKKDLFS 86

[Close]

BLAST of MELO3C015138.2 vs. TrEMBL
Match: tr|A0A1S3BQB7|A0A1S3BQB7_CUCME (uncharacterized protein LOC103492069 OS=Cucumis melo OX=3656 GN=LOC103492069 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.3e-05
Identity = 44/136 (32.35%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 1   MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSHQ----E 60
           MHGV++R  R K+T SR P RLP E  +V   D S  SLH + V   + +++  +    E
Sbjct: 1   MHGVRMRGHRVKSTLSRRPNRLPSEKNRVALFDSSSVSLHDENVAGILADNIESEPVVSE 60

Query: 61  SNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHSTSSFFQ 120
           S+ S++DSD++DDV L            SQP+ +       +H S V  +   S     Q
Sbjct: 61  SHMSEIDSDEKDDVPL-----------ASQPSTTNKNLEQTSHSSPVRSLVQSSPPIDVQ 120

Query: 121 DDILSLNVAQHSSGNV 133
             +L  ++    S NV
Sbjct: 121 QSVLDPDLVSQPSENV 125

[Close]

BLAST of MELO3C015138.2 vs. TrEMBL
Match: tr|A0A1S3CMY0|A0A1S3CMY0_CUCME (uncharacterized protein LOC103502746 OS=Cucumis melo OX=3656 GN=LOC103502746 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-05
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 1   MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVS------- 60
           +H V+++ RRFK+TP R  YRLP+E +Q  ++   +ESL    V S V E  +       
Sbjct: 28  VHHVKVKGRRFKSTPPRKRYRLPYEKVQGEATSKLQESLRSKAV-SEVGESAAPVSPAVH 87

Query: 61  ---HQESNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPSGVPFVSLHS 114
                E+  SDMDSD +D+V LIH+L        ++P+  +      + P G    S+HS
Sbjct: 88  AYRASEATVSDMDSDYQDNVPLIHLL--------NKPSKPVTAERLPSDPPG----SIHS 137

[Close]

BLAST of MELO3C015138.2 vs. TrEMBL
Match: tr|A0A1S3BST4|A0A1S3BST4_CUCME (uncharacterized protein LOC103492876 OS=Cucumis melo OX=3656 GN=LOC103492876 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-04
Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 5   QIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPV----RSYVPEHV---SHQ-- 64
           ++R  RFK+TP + PYRLP E +Q  +S   +ESL  + V     S VP  +   +H+  
Sbjct: 32  RVRGHRFKSTPFQRPYRLPSEKVQGEASSRLQESLRSEVVPEVGESSVPGSLTVHAHRAF 91

Query: 65  ESNFSDMDSDKRDDVSLIHILKHGVFSIKSQPNVSIPGPSTANHPS 102
           E+  SDMDSD +DDV LI +LK  +  I S+   S P  S  +  S
Sbjct: 92  EAIVSDMDSDDQDDVPLIRLLKKPLGPIISEKLPSDPPDSIHSQES 137

[Close]

BLAST of MELO3C015138.2 vs. TrEMBL
Match: tr|A0A1S3CS24|A0A1S3CS24_CUCME (uncharacterized protein LOC103504103 OS=Cucumis melo OX=3656 GN=LOC103504103 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.1e-04
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 1  MHGVQIRSRRFKTTPSRCPYRLPFETIQVPSSDPSEESLHVDPVRSYVPEHVSH----QE 60
          MHG+++R+R FK+TP+R PY+LP +  QV   + S  S+H + +     E V       +
Sbjct: 1  MHGMRMRARCFKSTPTRRPYQLPSKKSQVNIFESSPISVHDEHISDCAAEDVETTLGVSK 60

Query: 61 SNFSDMDSDKRDDVSL 73
          S+ S MD D+RDDV L
Sbjct: 61 SHVSKMDLDERDDVPL 76

The following BLAST results are available for this feature:

BLAST of MELO3C015138.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462765.1	3.3e-09	46.51	PREDICTED: uncharacterized protein LOC103501050 [Cucumis melo]	[more]
XP_008450476.1	6.5e-05	32.35	PREDICTED: uncharacterized protein LOC103492069 [Cucumis melo]	[more]
XP_008465030.1	1.5e-04	34.15	PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo]	[more]
XP_008451644.1	2.5e-04	39.62	PREDICTED: uncharacterized protein LOC103492876 [Cucumis melo]	[more]

BLAST of MELO3C015138.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C015138.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C015138.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CHR6\|A0A1S3CHR6_CUCME	2.2e-09	46.51	uncharacterized protein LOC103501050 OS=Cucumis melo OX=3656 GN=LOC103501050 PE=...	[more]
tr\|A0A1S3BQB7\|A0A1S3BQB7_CUCME	4.3e-05	32.35	uncharacterized protein LOC103492069 OS=Cucumis melo OX=3656 GN=LOC103492069 PE=...	[more]
tr\|A0A1S3CMY0\|A0A1S3CMY0_CUCME	9.6e-05	34.15	uncharacterized protein LOC103502746 OS=Cucumis melo OX=3656 GN=LOC103502746 PE=...	[more]
tr\|A0A1S3BST4\|A0A1S3BST4_CUCME	1.6e-04	39.62	uncharacterized protein LOC103492876 OS=Cucumis melo OX=3656 GN=LOC103492876 PE=...	[more]
tr\|A0A1S3CS24\|A0A1S3CS24_CUCME	8.1e-04	40.79	uncharacterized protein LOC103504103 OS=Cucumis melo OX=3656 GN=LOC103504103 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015138.2.1	MELO3C015138.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..153

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015138.2	Cucumber (Gy14) v2	cgybmedB032
MELO3C015138.2	Cucumber (Gy14) v2	cgybmedB404
MELO3C015138.2	Cucurbita maxima (Rimu)	cmamedB069
MELO3C015138.2	Cucurbita maxima (Rimu)	cmamedB111
MELO3C015138.2	Cucurbita moschata (Rifu)	cmomedB061
MELO3C015138.2	Cucurbita moschata (Rifu)	cmomedB104
MELO3C015138.2	Cucurbita pepo (Zucchini)	cpemedB387
MELO3C015138.2	Cucurbita pepo (Zucchini)	cpemedB733
MELO3C015138.2	Wild cucumber (PI 183967)	cpimedB036
MELO3C015138.2	Wild cucumber (PI 183967)	cpimedB455
MELO3C015138.2	Cucumber (Chinese Long) v2	cumedB033
MELO3C015138.2	Bottle gourd (USVL1VR-Ls)	lsimedB418
MELO3C015138.2	Watermelon (Charleston Gray)	medwcgB237
MELO3C015138.2	Watermelon (97103) v1	medwmB262
MELO3C015138.2	Silver-seed gourd	carmedB0434
MELO3C015138.2	Cucumber (Chinese Long) v3	cucmedB039
MELO3C015138.2	Cucumber (Chinese Long) v3	cucmedB464
MELO3C015138.2	Watermelon (97103) v2	medwmbB235
MELO3C015138.2	Wax gourd	medwgoB305