MELO3C015092.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015092.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Transmembrane protein, putative
Location	chr02 : 8398625 .. 8401425 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATTTATTTTAAAACACTTTTTAGTGTAACTTTTCATCATATGTTAAAAAAATAAAGTAAATTGTTTTCGTTTGTTTGTACAAGTTTTCATTTCCAGAATGACTCACTAAAAGTAATTATTTTGCACAAGTTAAAAAAGATGTTTATTCACATTCCATTTTATCACACATGTTACCAATTGTCGTATTACACTTTTAAAAATTTCTCTTCGTTTTTTCATTGTTTCTTTCAAACATCACATGTAATACAAGTATTCATTGGTTTAAAATTTTATTTTCTTAAATAGTTGTAAGTAGCTTCCATATACGAACTTTATGCTGACTAGGAAATTATTTACCATGTATATGGACATCGTAATAACACACGTACGTAATCATTTTTAGGAAATTTTGGTACTTTCAAATGGATCCACAAATCCTTGTTGTAGTCCTAATTGTGTTCATAGTTTTTCAACGTTCCTCCTAACGTTGGAGCCACTCATAAACGACAATAAACGGCTTCCATATACACCGTACGATACTAGGCATAGAATTAGGCAATTTGAATACTTTCGCATGATACACGAGTCCGATCTAGTGTGTCGACAAAGCACGTGCATGGACAAGCGAACATTTGCTATTCTATGCCATTTATTACGAATTTTTGTTAGCCATTCGTCGACAAAGATTGTCGATGTTGAGGAAATGGTTGTGATGTTCTTGTACGTCCTTGCCCATGACATGAATAACCGCGTTATTCAAAGAAAATTTGTACAGTCCGGTGAGACTGTATCGCGCCATTTCAGCCTCATGTTGTTGGCTGTGGTACGACTCCACGACAAGTTGATAAAGAAACTGGTGCCAGTAACAAACCACCTGCACAAATCCACGATGGAAGTGTTTCGAGGTACGTGTAGTCGAAGTCATCTGTATGTCATGTATCAGTACGTCTCACTAATACATGGTCGTTTATTTAAAAACCTGCAGAATTTCCTTAAGGCATTGGACGGGACGTAGATAAAGGTGAACGTGCCCATAATCGATTGTCTTATGTTTTGAACGCGTAAGGGGGAAATTGTCATTGATGTACTTAGTGTCTACAACACAAAAGGGGATTTTGTATACAATTCTTTTAGAAGAGTAGCAAATTCGTGCATTCTCCGAGATGCGCTTGCACAACCAAACGAACTGCAAGTGCCAAAGGGTATTTACAATTTTTAATCCTACCACGCCATTTAACAATTCCTAATTGATCGCGCATAAATCATTGGTTCTCCTAACAGGATATTACTATCTGTACGATACGGGCTATCCAAACGTGAAGGGATTTCTCATCCCATACAGAGGACAGAGGTACCACTTACAAGAGTGGCGTGACACTAGAAATGTATCAACCACTGCAAAGGAATACTTCAACATGAAACACTTATCTGCAAGAAATATCATTGAGTGCGCGTTCGATTTTCTGAAGAGTCACTGGGCAATACTTCGTGGAAAGTCAAACTATGCCCTCCAAGTGCAGTGTCGCACCATCCTAACATGTTGTCTGCTGCATAATTTGATTAACAGAGAAATTACAAATGGTGAAGACATAGACAACATTGACGAGGGAGACTCAACGTACGCAATGACCACTGTAGGAGACGACATTATATTCAGTACATTGAGATCACGAACAAGTGGTCTTAGTGGCGAGATGAATTAACTGAAGTGATGTTCACCGAATGGCAGTTGTGTAATGCATAGCTAAAACCATTTCAAATTAGAACCCCCGGGTTGTATGACATTTTAAATTACCTTTATTCTTTAATTTGAATATCGAGTGTATGCGTGCATGATTTACAACAATGGGAAAATAGAAATTAGAATGATATGTCCTAATATTGTTTGGCCATTATTGTGTCTCTTGAATGTGTAAATTCAAACTTGCTAACGTGTTTCATGTATTTGTTGTCATTTTTCATTGTCAGTATGGCAAGCTCGTCTCGTGCCCCCAAACATGTAGGGACAAAGGAGGAGGAAGACACTCTAGTCGAGTGTTTAGTGGAGTTGGTATCCGCCAACGAATGAAAGTCCGACAACGGTACGTTCCGACCAGGTTACCTGACCCAACTTATCTGCATGATGGCAGAAAAGTTTCCTAGATGTCATGTCCAAGTGACCACTGTAATAGACTGCAAAATTAAGACACTGAAGCGGACCTTCTAGGCTATCGCAGAAGTAGGTAGGCCATCATGCAGTGAGTTCAAATGGAAAGATGAGGCAAAGTGCATCATTACCGAGAAGGAACTATTCGATAATTGGGTTAAGGTAAGGAAACTAATAAAAATGTGACAATACTTGTGCAGTGTACTTTCATTCACCATTTTTCGTACCGTAGTTTGAATTGCTTATGTTTTTTATGCAATCGCATCCTGCAGCAAAAGGCCTCCTTAACAAACTGTTTTCCTATTACGATGAACTTGCATATGTGTTCAGGAGAGATAGGGCGACGGGTCAGTTTGCAGAGACATTCGTCGACATCGAGTCTAATGAGCTTGCCGGGTACGAGGGGTTTGACATGTCGGATGAAAATGATATGGAGTTTCCATTCATGTATAGCCAGAGGATTGTCATGTCTCAAGATGATGTACGCGCCTCACGACCTTATAGCGTGTCCGATAGTAGAACCGGATCGAGCGGATCCAAGCAAAAGAGGGAAAGCCAGTGGGAGGGTGAGATTGAGATGATACATATGGCGCTGGAGTGTGCGAATGACCAATTGAGGACCATTGTAGAGTGGTCTGCGCGTGCCCTTGCCAATGACACCACAGTTCATTAA

mRNA sequence

CTAATTTATTTTAAAACACTTTTTAGTGTAACTTTTCATCATATGTTAAAAAAATAAAGTAAATTGTTTTCGTTTGTTTGTACAAGTTTTCATTTCCAGAATGACTCACTAAAAGTAATTATTTTGCACAAGTTAAAAAAGATGTTTATTCACATTCCATTTTATCACACATGTTACCAATTGTCGTATTACACTTTTAAAAATTTCTCTTCGTTTTTTCATTGTTTCTTTCAAACATCACATGTAATACAAGTATTCATTGGTTTAAAATTTTATTTTCTTAAATAGTTGTAAGTAGCTTCCATATACGAACTTTATGCTGACTAGGAAATTATTTACCATGTATATGGACATCGTAATAACACACGTACGTAATCATTTTTAGGAAATTTTGGTACTTTCAAATGGATCCACAAATCCTTGTTGTAGTCCTAATTGTGTTCATAGTTTTTCAACGTTCCTCCTAACGTTGGAGCCACTCATAAACGACAATAAACGGCTTCCATATACACCGTACGATACTAGGCATAGAATTAGGCAATTTGAATACTTTCGCATGATACACGAGTCCGATCTAGTGTGTCGACAAAGCACGTGCATGGACAAGCGAACATTTGCTATTCTATGCCATTTATTACGAATTTTTGTTAGCCATTCGTCGACAAAGATTGTCGATGTTGAGGAAATGGTTGTGATGTTCTTGTACGTCCTTGCCCATGACATGAATAACCGCGTTATTCAAAGAAAATTTGTACAGTCCGGTGAGACTGTATCGCGCCATTTCAGCCTCATGTTGTTGGCTGTGGTACGACTCCACGACAAGTTGATAAAGAAACTGGTGCCAGTAACAAACCACCTGCACAAATCCACGATGGAAGTGTTTCGAGGCATTGGACGGGACGTAGATAAAGGTGAACGTGCCCATAATCGATTGTCTTATAGTAGCAAATTCGTGCATTCTCCGAGATGCGCTTGCACAACCAAACGAACTGCAAGTGCCAAAGGAGAAATTACAAATGGTGAAGACATAGACAACATTGACGAGGGAGACTCAACGTACGCAATGACCACTTATGGCAAGCTCGTCTCGTGCCCCCAAACATGTAGGGACAAAGGAGGAGGAAGACACTCTAGTCGAGTGTTTAGTGGAGTTGGTATCCGCCAACGAATGAAAGTCCGACAACGGCCATCATGCAGTGAGTTCAAATGGAAAGATGAGGCAAAGTGCATCATTACCGAGAAGGAACTATTCGATAATTGGGTTAAGTTTGAATTGCTTATGTTTTTTATGCAATCGCATCCTGCAGCAAAAGGCCTCCTTAACAAACTGTTTTCCTATTACGATGAACTTGCATATGTGTTCAGGAGAGATAGGGCGACGGGTCAGTTTGCAGAGACATTCGTCGACATCGAGTCTAATGAGCTTGCCGGGTACGAGGGGTTTGACATGTCGGATGAAAATGATATGGAGTTTCCATTCATGTATAGCCAGAGGATTGTCATGTCTCAAGATGATGTACGCGCCTCACGACCTTATAGCGTGTCCGATAGTAGAACCGGATCGAGCGGATCCAAGCAAAAGAGGGAAAGCCAGTGGGAGGGTGAGATTGAGATGATACATATGGCGCTGGAGTGTGCGAATGACCAATTGAGGACCATTGTAGAGTGGTCTGCGCGTGCCCTTGCCAATGACACCACAGTTCATTAA

Coding sequence (CDS)

ATGATACACGAGTCCGATCTAGTGTGTCGACAAAGCACGTGCATGGACAAGCGAACATTTGCTATTCTATGCCATTTATTACGAATTTTTGTTAGCCATTCGTCGACAAAGATTGTCGATGTTGAGGAAATGGTTGTGATGTTCTTGTACGTCCTTGCCCATGACATGAATAACCGCGTTATTCAAAGAAAATTTGTACAGTCCGGTGAGACTGTATCGCGCCATTTCAGCCTCATGTTGTTGGCTGTGGTACGACTCCACGACAAGTTGATAAAGAAACTGGTGCCAGTAACAAACCACCTGCACAAATCCACGATGGAAGTGTTTCGAGGCATTGGACGGGACGTAGATAAAGGTGAACGTGCCCATAATCGATTGTCTTATAGTAGCAAATTCGTGCATTCTCCGAGATGCGCTTGCACAACCAAACGAACTGCAAGTGCCAAAGGAGAAATTACAAATGGTGAAGACATAGACAACATTGACGAGGGAGACTCAACGTACGCAATGACCACTTATGGCAAGCTCGTCTCGTGCCCCCAAACATGTAGGGACAAAGGAGGAGGAAGACACTCTAGTCGAGTGTTTAGTGGAGTTGGTATCCGCCAACGAATGAAAGTCCGACAACGGCCATCATGCAGTGAGTTCAAATGGAAAGATGAGGCAAAGTGCATCATTACCGAGAAGGAACTATTCGATAATTGGGTTAAGTTTGAATTGCTTATGTTTTTTATGCAATCGCATCCTGCAGCAAAAGGCCTCCTTAACAAACTGTTTTCCTATTACGATGAACTTGCATATGTGTTCAGGAGAGATAGGGCGACGGGTCAGTTTGCAGAGACATTCGTCGACATCGAGTCTAATGAGCTTGCCGGGTACGAGGGGTTTGACATGTCGGATGAAAATGATATGGAGTTTCCATTCATGTATAGCCAGAGGATTGTCATGTCTCAAGATGATGTACGCGCCTCACGACCTTATAGCGTGTCCGATAGTAGAACCGGATCGAGCGGATCCAAGCAAAAGAGGGAAAGCCAGTGGGAGGGTGAGATTGAGATGATACATATGGCGCTGGAGTGTGCGAATGACCAATTGAGGACCATTGTAGAGTGGTCTGCGCGTGCCCTTGCCAATGACACCACAGTTCATTAA

Protein sequence

MIHESDLVCRQSTCMDKRTFAILCHLLRIFVSHSSTKIVDVEEMVVMFLYVLAHDMNNRVIQRKFVQSGETVSRHFSLMLLAVVRLHDKLIKKLVPVTNHLHKSTMEVFRGIGRDVDKGERAHNRLSYSSKFVHSPRCACTTKRTASAKGEITNGEDIDNIDEGDSTYAMTTYGKLVSCPQTCRDKGGGRHSSRVFSGVGIRQRMKVRQRPSCSEFKWKDEAKCIITEKELFDNWVKFELLMFFMQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH

Homology

[Close]

BLAST of MELO3C015092.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67
Identity = 205/576 (35.59%), Postives = 257/576 (44.62%), Query Frame = 0


Query: 1   MIHESDLVCRQSTCMDKRTFAILCHLLRIFVSHSSTKIVDVEEMVVMFLYVLAHDMNNRV 60
           MIHESDLVCRQST MD+RTFAILCHLLR     SST+IVDVEEMV MFL+VLAHD+ NRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 61  IQRKFVQSGETVSRHFSLMLLAVVRLHDKLIKKLVPVTNHLHKSTMEVFRGIGRDVD--- 120
           IQ++FV+SGETVSRHF+++LLAV+RL+++LIK+ VPVT++ +    + F      +D   
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 121 ----------------KGERAHNRLS---------------------------------- 180
                           KGE A N L                                   
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 181 ------------------------YSSKFVHSPRCACTTKRTASAK-------------- 240
                                   Y  +  H            +AK              
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 241 ----------------------------------------GEITNGEDIDNIDEGDSTYA 300
                                                    E+T   D+++ DEGDSTYA
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 301 MTTYGKLV------------------------------SCPQTCRDKGGGRHSSRVF--- 360
            TT  + +                              SC       GG +  +  F   
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGMELVSMGGWKSDNGTFRPG 360

Query: 361 -------------SGVGIRQ------RMKVRQR----------PSCSEFKWKDEAKCIIT 383
                        SG  +R       R+K  +R          P+CS F W DE KCI+ 
Sbjct: 361 YLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVA 420

[Close]

BLAST of MELO3C015092.2 vs. NCBI nr
Match: XP_016900897.1 (PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo])

HSP 1 Score: 227.3 bits (578), Expect = 9.1e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 270 RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSV 329
           RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSV
Sbjct: 18  RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSV 77

Query: 330 SDSRTGSSGSKQKRESQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH 384
           SDSRTGSSGSKQKRESQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH
Sbjct: 78  SDSRTGSSGSKQKRESQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH 131

[Close]

BLAST of MELO3C015092.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 181.8 bits (460), Expect = 4.4e-42
Identity = 160/540 (29.63%), Postives = 220/540 (40.74%), Query Frame = 0


Query: 34  SSTKIVDVEEMVVMFLYVLAHDMNNRVIQRKFVQSGETVSRHFSLMLLAVVRLHDKLIKK 93
           +ST++VDVEEMV MFL++LAHD+ +RVI+R+F++SGET+SRHF+++LLAV+RLH++L+KK
Sbjct: 62  TSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKK 121

Query: 94  LVPVTNHL---------------------------------------------------- 153
             PV N                                                      
Sbjct: 122 PQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGD 181

Query: 154 -----------------------HKSTMEVFRGIGRDVD-------------KGERAH-- 213
                                    + ++V +G    VD             +G+R H  
Sbjct: 182 FVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQ 241

Query: 214 ----------------NRLSYSSKFVHSPRCACTTKRTASAKG----------------- 273
                           N   YS++ V          R A  +G                 
Sbjct: 242 EWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACC 301

Query: 274 --------EITNGEDIDNIDEGDSTYAMT------------------------------- 333
                   E+TN +  DNIDE DST+A T                               
Sbjct: 302 LLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSR 361

Query: 334 ----TYGK-----LVSCPQTCRDKGGGR---------------------------HSSRV 372
               T+ K     LV C     + GG R                           H+S +
Sbjct: 362 LPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTI 421

[Close]

BLAST of MELO3C015092.2 vs. NCBI nr
Match: ABQ53639.1 (transposase [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 6.6e-38
Identity = 125/330 (37.88%), Postives = 163/330 (49.39%), Query Frame = 0


Query: 37  KIVDVEEMVVMFLYVLAHDMNNRVIQRKFVQSGETVSRHFSLMLLAVVRLHDKLIKKLVP 96
           +IVDVEEMV +FL+VL H++NNRVIQRKF++S ETVSRHF+L+LLAV+RLHDK +KK  P
Sbjct: 61  EIVDVEEMVPVFLHVLVHNVNNRVIQRKFIRSSETVSRHFNLVLLAVIRLHDKWLKKPQP 120

Query: 97  VTNHLHKSTMEVFRG------------IGRD----------------------------- 156
           VTN       + F+             +G+D                             
Sbjct: 121 VTNTYIDPRWKCFKNCLGALDGTYIKMVGKDPRLIYAFFGMCLHDQTNFKFPRVFTISTP 180

Query: 157 ----VDKGERAHNRLSYSSKFVH--SPRCACTTKRTASAKGE--ITNGEDIDNIDEGDST 216
                +     +N LSY + F +  + R   T +  A   G+  ITN +D+++IDEGD  
Sbjct: 181 PTTFKNLYVTVYNPLSYVTWFYYLCNARYPNTKRFLAPYIGQRKITNVDDLEDIDEGD-- 240

Query: 217 YAMTTYGKLVSCPQTCRDKGGGRHSSRVFSGVGIRQRMKVRQRPSCSEFKWKDEAKCIIT 276
                    ++C   C              G G                  +DEA  +  
Sbjct: 241 ---------LACRSMC--------------GQG------------------EDEATLVEC 300

Query: 277 EKELFDNWVKFELLMFFMQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIES 318
             EL     +   +    Q+HPAAKGLLNKLF YYDEL YVF RDR TGQ  +TFV++ES
Sbjct: 301 LVELVSAMDESRTMGCSDQTHPAAKGLLNKLFPYYDELVYVFERDRVTGQGVKTFVNVES 347

[Close]

BLAST of MELO3C015092.2 vs. NCBI nr
Match: XP_008444620.1 (PREDICTED: uncharacterized protein LOC103487886 [Cucumis melo])

HSP 1 Score: 154.8 bits (390), Expect = 5.8e-34
Identity = 81/131 (61.83%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 211 PSCSEFKWKDEAKCIITEKELFDNWVKFELLMFFMQSHPAAKGLLNKLFSYYDELAYVFR 270
           PSCS F W DEAKCII E +L DNWV+          HP AK LLNK F YYDELAYVF+
Sbjct: 4   PSCSRFGWNDEAKCIIGENDLSDNWVRI---------HPVAKALLNKSFPYYDELAYVFK 63

Query: 271 RDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVS 330
           +DRATG+  ETF DI SN+ + YEGF   D NDME P +YSQ   MSQ+DV A RP S S
Sbjct: 64  KDRATGRGVETFTDIGSNDPSRYEGFQPPDGNDMEIPTIYSQGFNMSQEDVWAPRPSSAS 123

Query: 331 DSRTGSSGSKQ 342
           DSRT SSGSK+
Sbjct: 124 DSRTRSSGSKR 125

[Close]

BLAST of MELO3C015092.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-08
Identity = 28/78 (35.90%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 9   CRQSTCMDKRTFAILCHLLRIFVSHSSTKIVDVEEMVVMFLYVLAHDMNNRVIQRKFVQS 68
           C ++  MDK  F  LC LL+       T  + +E  + +FL+++ H++  R +Q  F  S
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 69  GETVSRHFSLMLLAVVRL 87
           GET+SRHF+ +L AV+ +
Sbjct: 102 GETISRHFNNVLNAVIAI 119

[Close]

BLAST of MELO3C015092.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.9e-68
Identity = 205/576 (35.59%), Postives = 257/576 (44.62%), Query Frame = 0


Query: 1   MIHESDLVCRQSTCMDKRTFAILCHLLRIFVSHSSTKIVDVEEMVVMFLYVLAHDMNNRV 60
           MIHESDLVCRQST MD+RTFAILCHLLR     SST+IVDVEEMV MFL+VLAHD+ NRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 61  IQRKFVQSGETVSRHFSLMLLAVVRLHDKLIKKLVPVTNHLHKSTMEVFRGIGRDVD--- 120
           IQ++FV+SGETVSRHF+++LLAV+RL+++LIK+ VPVT++ +    + F      +D   
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 121 ----------------KGERAHNRLS---------------------------------- 180
                           KGE A N L                                   
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 181 ------------------------YSSKFVHSPRCACTTKRTASAK-------------- 240
                                   Y  +  H            +AK              
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 241 ----------------------------------------GEITNGEDIDNIDEGDSTYA 300
                                                    E+T   D+++ DEGDSTYA
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 301 MTTYGKLV------------------------------SCPQTCRDKGGGRHSSRVF--- 360
            TT  + +                              SC       GG +  +  F   
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGMELVSMGGWKSDNGTFRPG 360

Query: 361 -------------SGVGIRQ------RMKVRQR----------PSCSEFKWKDEAKCIIT 383
                        SG  +R       R+K  +R          P+CS F W DE KCI+ 
Sbjct: 361 YLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVA 420

[Close]

BLAST of MELO3C015092.2 vs. TrEMBL
Match: tr|A0A1S4DY48|A0A1S4DY48_CUCME (uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 6.0e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 270 RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSV 329
           RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSV
Sbjct: 18  RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSV 77

Query: 330 SDSRTGSSGSKQKRESQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH 384
           SDSRTGSSGSKQKRESQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH
Sbjct: 78  SDSRTGSSGSKQKRESQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH 131

[Close]

BLAST of MELO3C015092.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.9e-42
Identity = 160/540 (29.63%), Postives = 220/540 (40.74%), Query Frame = 0


Query: 34  SSTKIVDVEEMVVMFLYVLAHDMNNRVIQRKFVQSGETVSRHFSLMLLAVVRLHDKLIKK 93
           +ST++VDVEEMV MFL++LAHD+ +RVI+R+F++SGET+SRHF+++LLAV+RLH++L+KK
Sbjct: 62  TSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKK 121

Query: 94  LVPVTNHL---------------------------------------------------- 153
             PV N                                                      
Sbjct: 122 PQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGD 181

Query: 154 -----------------------HKSTMEVFRGIGRDVD-------------KGERAH-- 213
                                    + ++V +G    VD             +G+R H  
Sbjct: 182 FVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQ 241

Query: 214 ----------------NRLSYSSKFVHSPRCACTTKRTASAKG----------------- 273
                           N   YS++ V          R A  +G                 
Sbjct: 242 EWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACC 301

Query: 274 --------EITNGEDIDNIDEGDSTYAMT------------------------------- 333
                   E+TN +  DNIDE DST+A T                               
Sbjct: 302 LLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSR 361

Query: 334 ----TYGK-----LVSCPQTCRDKGGGR---------------------------HSSRV 372
               T+ K     LV C     + GG R                           H+S +
Sbjct: 362 LPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTI 421

[Close]

BLAST of MELO3C015092.2 vs. TrEMBL
Match: tr|A5Y732|A5Y732_CUCME (Transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.3e-38
Identity = 125/330 (37.88%), Postives = 163/330 (49.39%), Query Frame = 0


Query: 37  KIVDVEEMVVMFLYVLAHDMNNRVIQRKFVQSGETVSRHFSLMLLAVVRLHDKLIKKLVP 96
           +IVDVEEMV +FL+VL H++NNRVIQRKF++S ETVSRHF+L+LLAV+RLHDK +KK  P
Sbjct: 61  EIVDVEEMVPVFLHVLVHNVNNRVIQRKFIRSSETVSRHFNLVLLAVIRLHDKWLKKPQP 120

Query: 97  VTNHLHKSTMEVFRG------------IGRD----------------------------- 156
           VTN       + F+             +G+D                             
Sbjct: 121 VTNTYIDPRWKCFKNCLGALDGTYIKMVGKDPRLIYAFFGMCLHDQTNFKFPRVFTISTP 180

Query: 157 ----VDKGERAHNRLSYSSKFVH--SPRCACTTKRTASAKGE--ITNGEDIDNIDEGDST 216
                +     +N LSY + F +  + R   T +  A   G+  ITN +D+++IDEGD  
Sbjct: 181 PTTFKNLYVTVYNPLSYVTWFYYLCNARYPNTKRFLAPYIGQRKITNVDDLEDIDEGD-- 240

Query: 217 YAMTTYGKLVSCPQTCRDKGGGRHSSRVFSGVGIRQRMKVRQRPSCSEFKWKDEAKCIIT 276
                    ++C   C              G G                  +DEA  +  
Sbjct: 241 ---------LACRSMC--------------GQG------------------EDEATLVEC 300

Query: 277 EKELFDNWVKFELLMFFMQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIES 318
             EL     +   +    Q+HPAAKGLLNKLF YYDEL YVF RDR TGQ  +TFV++ES
Sbjct: 301 LVELVSAMDESRTMGCSDQTHPAAKGLLNKLFPYYDELVYVFERDRVTGQGVKTFVNVES 347

[Close]

BLAST of MELO3C015092.2 vs. TrEMBL
Match: tr|A0A1S3BAQ2|A0A1S3BAQ2_CUCME (uncharacterized protein LOC103487886 OS=Cucumis melo OX=3656 GN=LOC103487886 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.8e-34
Identity = 81/131 (61.83%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 211 PSCSEFKWKDEAKCIITEKELFDNWVKFELLMFFMQSHPAAKGLLNKLFSYYDELAYVFR 270
           PSCS F W DEAKCII E +L DNWV+          HP AK LLNK F YYDELAYVF+
Sbjct: 4   PSCSRFGWNDEAKCIIGENDLSDNWVRI---------HPVAKALLNKSFPYYDELAYVFK 63

Query: 271 RDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVS 330
           +DRATG+  ETF DI SN+ + YEGF   D NDME P +YSQ   MSQ+DV A RP S S
Sbjct: 64  KDRATGRGVETFTDIGSNDPSRYEGFQPPDGNDMEIPTIYSQGFNMSQEDVWAPRPSSAS 123

Query: 331 DSRTGSSGSKQ 342
           DSRT SSGSK+
Sbjct: 124 DSRTRSSGSKR 125

The following BLAST results are available for this feature:

BLAST of MELO3C015092.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33754.1	1.0e-67	35.59	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_016900897.1	9.1e-56	100.00	PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 P...	[more]
ADN34114.1	4.4e-42	29.63	retrotransposon protein [Cucumis melo subsp. melo]	[more]
ABQ53639.1	6.6e-38	37.88	transposase [Cucumis melo]	[more]
XP_008444620.1	5.8e-34	61.83	PREDICTED: uncharacterized protein LOC103487886 [Cucumis melo]	[more]

BLAST of MELO3C015092.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41980.1	5.1e-08	35.90	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]

BLAST of MELO3C015092.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C015092.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBB2\|E5GBB2_CUCME	6.9e-68	35.59	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4DY48\|A0A1S4DY48_CUCME	6.0e-56	100.00	uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=...	[more]
tr\|E5GCB5\|E5GCB5_CUCME	2.9e-42	29.63	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A5Y732\|A5Y732_CUCME	4.3e-38	37.88	Transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
tr\|A0A1S3BAQ2\|A0A1S3BAQ2_CUCME	3.8e-34	61.83	uncharacterized protein LOC103487886 OS=Cucumis melo OX=3656 GN=LOC103487886 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015092.2.1	MELO3C015092.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..346
None	No IPR available	PANTHER	PTHR22930:SF112	SUBFAMILY NOT NAMED	coord: 1..99
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 1..99

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015092.2	Watermelon (97103) v1	medwmB264
MELO3C015092.2	Silver-seed gourd	carmedB0884
MELO3C015092.2	Silver-seed gourd	carmedB0953
MELO3C015092.2	Cucumber (Chinese Long) v3	cucmedB039
MELO3C015092.2	Watermelon (97103) v2	medwmbB235
MELO3C015092.2	Wax gourd	medwgoB305
MELO3C015092.2	Cucumber (Gy14) v2	cgybmedB032
MELO3C015092.2	Cucumber (Gy14) v1	cgymedB576
MELO3C015092.2	Cucurbita maxima (Rimu)	cmamedB069
MELO3C015092.2	Cucurbita maxima (Rimu)	cmamedB111
MELO3C015092.2	Cucurbita moschata (Rifu)	cmomedB061
MELO3C015092.2	Cucurbita moschata (Rifu)	cmomedB104
MELO3C015092.2	Cucurbita pepo (Zucchini)	cpemedB387
MELO3C015092.2	Cucurbita pepo (Zucchini)	cpemedB733
MELO3C015092.2	Wild cucumber (PI 183967)	cpimedB036
MELO3C015092.2	Cucumber (Chinese Long) v2	cumedB033
MELO3C015092.2	Bottle gourd (USVL1VR-Ls)	lsimedB418
MELO3C015092.2	Watermelon (Charleston Gray)	medwcgB237