MELO3C015048.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C015048.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 9396946 .. 9397302 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAGAAACAAATAAAGGAGAGGTCAGAAATGAATGAGGAGGACATTAGGAAACTGAAAGATTTAGTTTTGGGGTTGTCCAAAAGCGTCGAAAGCCTCGCAGAGGAATTGAGAGAAAACATTGTTAGTCGCCGACGGGAAGAATCTGGTAAGTCGGAGGGATCAGTATTGAAAATGAACAGAAAAATGGAAGAAGACCGGGGCACAATTGAGAAAGGGACTTGGGAGCAAGCGCTTAAATGGGCTGCCAATTGCAAATGCAAGGCGGCTGAGAGAGAAGACTCCATGGACATGGGAGCAGGCGCAAAAATGGATTGCGGATTGCAAGGCGGAAAGAATACAGAGGAATGTTAG

mRNA sequence

ATGGAGCAGAAACAAATAAAGGAGAGGTCAGAAATGAATGAGGAGGACATTAGGAAACTGAAAGATTTAGTTTTGGGGTTGTCCAAAAGCGTCGAAAGCCTCGCAGAGGAATTGAGAGAAAACATTGTTAGTCGCCGACGGGAAGAATCTGGTAAGTCGGAGGGATCAGTATTGAAAATGAACAGAAAAATGGAAGAAGACCGGGGCACAATTGAGAAAGGGACTTGGGAGCAAGCGCTTAAATGGGCTGCCAATTGCAAATGCAAGGCGGCTGAGAGAGAAGACTCCATGGACATGGGAGCAGGCGCAAAAATGGATTGCGGATTGCAAGGCGGAAAGAATACAGAGGAATGTTAG

Coding sequence (CDS)

ATGGAGCAGAAACAAATAAAGGAGAGGTCAGAAATGAATGAGGAGGACATTAGGAAACTGAAAGATTTAGTTTTGGGGTTGTCCAAAAGCGTCGAAAGCCTCGCAGAGGAATTGAGAGAAAACATTGTTAGTCGCCGACGGGAAGAATCTGGTAAGTCGGAGGGATCAGTATTGAAAATGAACAGAAAAATGGAAGAAGACCGGGGCACAATTGAGAAAGGGACTTGGGAGCAAGCGCTTAAATGGGCTGCCAATTGCAAATGCAAGGCGGCTGAGAGAGAAGACTCCATGGACATGGGAGCAGGCGCAAAAATGGATTGCGGATTGCAAGGCGGAAAGAATACAGAGGAATGTTAG

Protein sequence

MEQKQIKERSEMNEEDIRKLKDLVLGLSKSVESLAEELRENIVSRRREESGKSEGSVLKMNRKMEEDRGTIEKGTWEQALKWAANCKCKAAEREDSMDMGAGAKMDCGLQGGKNTEEC
Homology
[Close]
BLAST of MELO3C015048.2 vs. NCBI nr
Match: XP_011654353.1 (PREDICTED: uncharacterized protein LOC105435354 [Cucumis sativus])

HSP 1 Score: 52.8 bits (125), Expect = 9.5e-04
Identity = 31/66 (46.97%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 1  MEQKQIKERSEMNEEDIRKLKDLVLGLSKSVESLAEELRENIVSRRREESGKSEGSVLKM 60
          M Q+QI++  +  E++I  LK+++L + K++E +AE LREN   +RREESG S+GSV+K+
Sbjct: 1  MAQRQIEDIVDGTEKEIMVLKEMLLEMKKAMERMAEVLRENHSYKRREESGTSDGSVMKL 60

Query: 61 NRKMEE 67
            K EE
Sbjct: 61 KGKAEE 66

The following BLAST results are available for this feature:
BLAST of MELO3C015048.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654353.19.5e-0446.97PREDICTED: uncharacterized protein LOC105435354 [Cucumis sativus][more]
BLAST of MELO3C015048.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C015048.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C015048.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015048.2.1MELO3C015048.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..69

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015048.2Cucumber (Chinese Long) v3cucmedB039
MELO3C015048.2Wax gourdmedwgoB305
MELO3C015048.2Cucumber (Gy14) v2cgybmedB032
MELO3C015048.2Cucumber (Gy14) v1cgymedB576
MELO3C015048.2Cucurbita maxima (Rimu)cmamedB069
MELO3C015048.2Cucurbita maxima (Rimu)cmamedB111
MELO3C015048.2Cucurbita moschata (Rifu)cmomedB061
MELO3C015048.2Cucurbita moschata (Rifu)cmomedB104
MELO3C015048.2Cucurbita pepo (Zucchini)cpemedB387
MELO3C015048.2Wild cucumber (PI 183967)cpimedB036
MELO3C015048.2Cucumber (Chinese Long) v2cumedB033
MELO3C015048.2Bottle gourd (USVL1VR-Ls)lsimedB418
MELO3C015048.2Bottle gourd (USVL1VR-Ls)lsimedB428
MELO3C015048.2Silver-seed gourdcarmedB0546
MELO3C015048.2Silver-seed gourdcarmedB0953