MELO3C015006 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015006
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptiontranslocon outer complex protein 120
Locationchr2 : 9492686 .. 9493003 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCATTCTACTATCGACAGGATGAGAAGCTTCTTAGGCTTTTCTCTTTTCCAATCAGTAAGAGGTAATTTTGTTCTTGATATCTTCACACTTGTTCGCTTCGTGTTATGAGGAAAAGAATTGTTTGTTCTAATTTCTTCAGATGTTTGTTTAATTTGAATATGCAAGCGAGAGATATGAATTCGATTATGTTTGGTTCATGTCTATGCTGCAGAGTTGATGGAATTGGGGACAATCAAGAAGAGGAGTTTGTAGTTCCAGGAATTGATGAGGTTGTTACTGGTACCTTCATTTTCCACATTTTCCTTAGCTGA

mRNA sequence

ATGGCATCATTCTACTATCGACAGGATGAGAAGCTTCTTAGGCTTTTCTCTTTTCCAATCAGTAAGAGAGTTGATGGAATTGGGGACAATCAAGAAGAGGAGTTTGTAGTTCCAGGAATTGATGAGGTTGTTACTGGTACCTTCATTTTCCACATTTTCCTTAGCTGA

Coding sequence (CDS)

ATGGCATCATTCTACTATCGACAGGATGAGAAGCTTCTTAGGCTTTTCTCTTTTCCAATCAGTAAGAGAGTTGATGGAATTGGGGACAATCAAGAAGAGGAGTTTGTAGTTCCAGGAATTGATGAGGTTGTTACTGGTACCTTCATTTTCCACATTTTCCTTAGCTGA

Protein sequence

MASFYYRQDEKLLRLFSFPISKRVDGIGDNQEEEFVVPGIDEVVTGTFIFHIFLS*
Homology
[Close]
BLAST of MELO3C015006 vs. NCBI nr
Match: gi|659070593|ref|XP_008455790.1| (PREDICTED: uncharacterized protein LOC103495870 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 1 

Query: 11 KLLRLFSFPISKRVDGIGDNQEEEFVVPGIDEVV 45
          +LLRLFS PISKRVDGI DNQEEEFVV G+DEVV
Sbjct: 53 ELLRLFSSPISKRVDGIRDNQEEEFVVTGVDEVV 86

The following BLAST results are available for this feature:
BLAST of MELO3C015006 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070593|ref|XP_008455790.1|2.5e-0685.29PREDICTED: uncharacterized protein LOC103495870 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU52009melon EST collection version 4.0transcribed_cluster
MU54861melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015006T1MELO3C015006T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU52009MU52009transcribed_cluster
MU54861MU54861transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015006Bottle gourd (USVL1VR-Ls)lsimeB297
MELO3C015006Cucumber (Gy14) v2cgybmeB335
MELO3C015006Cucumber (Chinese Long) v3cucmeB400
MELO3C015006Cucumber (Gy14) v1cgymeB605
MELO3C015006Wild cucumber (PI 183967)cpimeB386
MELO3C015006Cucumber (Chinese Long) v2cumeB391
MELO3C015006Watermelon (Charleston Gray)mewcgB264