MELO3C014862 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014862
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
Locationchr6 : 21369573 .. 21370393 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAAGATGAAAGCGATGAACTCCAAAATCTTGCCAATTGTTGGGGTATCAAAAAAGGCATCTCTAAAATTTGACGAGTGGAGAGGAGATGTTGATTTAGTCGTGGTCTGTACGGATGACTTTGACGTAGTACTCGATATGGAATTTCTCTTACAACATAAAGTCATCATCATGCCATTAGCTCAGTATATGGTAGTAACAAGCAATAACCCAACAGTGATCCAAGCAAAAATCAAACAACCGAGTGGGGTGAGAATGATTTCAGCCCTACAACTGAAAAAATGCCTCAGTAGAGAAAAGCCGACCTTTATGCCCATCTCGTTGGTGATGAGCAGATAGAAACGAGAATTGTACCAATAGAGATCCAGAAAGTTCTGAATAAGTATGTTGATATCATGCCGCATGAACTGCCAAAGACACTGCCTCTTCGACAGGAGATTCTCGATCACGAGATCGAACTTGTCCTAGGAGCCAGAACCAAGCCTCCAACAAAGAATGCTTACCGGATGGCTCCACTTGAGTTAGCTGAGCTCAGGAAACAATTGAACGAGTTCTTAGTTGCCAAATTTATCAAACCTGCAAAAGCGCCTTATGGGACTCCTGTGCTATTTCAAAAGAAGAAAGATGAGTCATTACGACTGTGCATAGACTACAGAGCTTTAAACAAAGTCACAGTTCGAAATAGATATCCCTTCCCGATCATAAATGATTTATTTGACCAATTGGATGGAGCTCAGTACTTCACGAAGCTTGATCTCCAGTCAGGCTACTACCAAGTTCGGATAGCACAAGGGGATGGACCGAAGACTACATGTTAA

mRNA sequence

ATGAGCAAGATGAAAGCGATGAACTCCAAAATCTTGCCAATTGTTGGGGTATCAAAAAAGGCATCTCTAAAATTTGACGAGTGGAGAGGAGATGTTGATTTAGTCGTGGTCTGTACGGATGACTTTGACGTAGTACTCGATATGGAATTTCTCTTACAACATAAAGTCATCATCATGCCATTAGCTCAGTATATGGTAGTAACAAGCAATAACCCAACAGTGATCCAAGCAAAAATCAAACAACCGAGTGGGATAGAAACGAGAATTGTACCAATAGAGATCCAGAAAGTTCTGAATAAGTATGTTGATATCATGCCGCATGAACTGCCAAAGACACTGCCTCTTCGACAGGAGATTCTCGATCACGAGATCGAACTTGTCCTAGGAGCCAGAACCAAGCCTCCAACAAAGAATGCTTACCGGATGGCTCCACTTGAGTTAGCTGAGCTCAGGAAACAATTGAACGAGTTCTTAGTTGCCAAATTTATCAAACCTGCAAAAGCGCCTTATGGGACTCCTGTGCTATTTCAAAAGAAGAAAGATGAGTCATTACGACTGTGCATAGACTACAGAGCTTTAAACAAAGTCACAGTTCGAAATAGATATCCCTTCCCGATCATAAATGATTTATTTGACCAATTGGATGGAGCTCAGTACTTCACGAAGCTTGATCTCCAGTCAGGCTACTACCAAGTTCGGATAGCACAAGGGGATGGACCGAAGACTACATGTTAA

Coding sequence (CDS)

ATGAGCAAGATGAAAGCGATGAACTCCAAAATCTTGCCAATTGTTGGGGTATCAAAAAAGGCATCTCTAAAATTTGACGAGTGGAGAGGAGATGTTGATTTAGTCGTGGTCTGTACGGATGACTTTGACGTAGTACTCGATATGGAATTTCTCTTACAACATAAAGTCATCATCATGCCATTAGCTCAGTATATGGTAGTAACAAGCAATAACCCAACAGTGATCCAAGCAAAAATCAAACAACCGAGTGGGATAGAAACGAGAATTGTACCAATAGAGATCCAGAAAGTTCTGAATAAGTATGTTGATATCATGCCGCATGAACTGCCAAAGACACTGCCTCTTCGACAGGAGATTCTCGATCACGAGATCGAACTTGTCCTAGGAGCCAGAACCAAGCCTCCAACAAAGAATGCTTACCGGATGGCTCCACTTGAGTTAGCTGAGCTCAGGAAACAATTGAACGAGTTCTTAGTTGCCAAATTTATCAAACCTGCAAAAGCGCCTTATGGGACTCCTGTGCTATTTCAAAAGAAGAAAGATGAGTCATTACGACTGTGCATAGACTACAGAGCTTTAAACAAAGTCACAGTTCGAAATAGATATCCCTTCCCGATCATAAATGATTTATTTGACCAATTGGATGGAGCTCAGTACTTCACGAAGCTTGATCTCCAGTCAGGCTACTACCAAGTTCGGATAGCACAAGGGGATGGACCGAAGACTACATGTTAA

Protein sequence

MSKMKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLAQYMVVTSNNPTVIQAKIKQPSGIETRIVPIEIQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC*
Homology
[Close]
BLAST of MELO3C014862 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 1 

Query: 90  VPIEIQKVLNKYVDIMPHELP-KTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELA 149
           +P+ +Q+   KY +I+ ++LP +   +    + H+IE+  GAR   P    Y +      
Sbjct: 556 LPVWLQQ---KYREIIRNDLPPRPADINNIPVKHDIEIKPGARL--PRLQPYHVTEKNEQ 615

Query: 150 ELRKQLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIIN 209
           E+ K + + L  KFI P+K+P  +PV+   KKD + RLC+DYR LNK T+ + +P P I+
Sbjct: 616 EINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRID 675

Query: 210 DLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKT 243
           +L  ++  AQ FT LDL SGY+Q+ +   D  KT
Sbjct: 676 NLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKT 704

[Close]
BLAST of MELO3C014862 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 1 

Query: 90  VPIEIQKVLNKYVDIMPHELP-KTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELA 149
           +P+ +Q+   KY +I+ ++LP +   +    + H+IE+  GAR   P    Y +      
Sbjct: 582 LPVWLQQ---KYREIIRNDLPPRPADINNIPVKHDIEIKPGARL--PRLQPYHVTEKNEQ 641

Query: 150 ELRKQLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIIN 209
           E+ K + + L  KFI P+K+P  +PV+   KKD + RLC+DYR LNK T+ + +P P I+
Sbjct: 642 EINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRID 701

Query: 210 DLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKT 243
           +L  ++  AQ FT LDL SGY+Q+ +   D  KT
Sbjct: 702 NLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKT 730

[Close]
BLAST of MELO3C014862 vs. Swiss-Prot
Match: RRPO_OENBE (RNA-directed DNA polymerase homolog OS=Oenothera berteroana PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.7e-20
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 1 

Query: 183 SLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKT 242
           SLR+CIDYRAL KVT++N+YP P ++DLFD+L  A +FTKLDL+SGY+QVRIA+GD PKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 243 TC 245
           TC
Sbjct: 65  TC 66

[Close]
BLAST of MELO3C014862 vs. Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-18
Identity = 57/200 (28.50%), Postives = 102/200 (51.00%), Query Frame = 1 

Query: 44  VVLDMEFLLQHKVIIMPLAQYMVVTSNNPTVIQAK--IKQPSGIETRIVPIEIQKVLNKY 103
           + +  EFL+  K        +  +  NN  +  +K  + Q + +   +   E+  +  ++
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381

Query: 104 VDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAK 163
            DI      + LP   + L+ E+EL      + P +N Y + P ++  +  ++N+ L + 
Sbjct: 382 KDITAETNTEKLPKPIKGLEFEVELTQ-ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSG 441

Query: 164 FIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFT 223
            I+ +KA    PV+F  KK+ +LR+ +DY+ LNK    N YP P+I  L  ++ G+  FT
Sbjct: 442 IIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFT 501

Query: 224 KLDLQSGYYQVRIAQGDGPK 242
           KLDL+S Y+ +R+ +GD  K
Sbjct: 502 KLDLKSAYHLIRVRKGDEHK 519

[Close]
BLAST of MELO3C014862 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-18
Identity = 57/200 (28.50%), Postives = 102/200 (51.00%), Query Frame = 1 

Query: 44  VVLDMEFLLQHKVIIMPLAQYMVVTSNNPTVIQAK--IKQPSGIETRIVPIEIQKVLNKY 103
           + +  EFL+  K        +  +  NN  +  +K  + Q + +   +   E+  +  ++
Sbjct: 322 ISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEF 381

Query: 104 VDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAK 163
            DI      + LP   + L+ E+EL      + P +N Y + P ++  +  ++N+ L + 
Sbjct: 382 KDITAETNTEKLPKPIKGLEFEVELTQ-ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSG 441

Query: 164 FIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFT 223
            I+ +KA    PV+F  KK+ +LR+ +DY+ LNK    N YP P+I  L  ++ G+  FT
Sbjct: 442 IIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFT 501

Query: 224 KLDLQSGYYQVRIAQGDGPK 242
           KLDL+S Y+ +R+ +GD  K
Sbjct: 502 KLDLKSAYHLIRVRKGDEHK 519

[Close]
BLAST of MELO3C014862 vs. TrEMBL
Match: A5B4X8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.1e-60
Identity = 135/272 (49.63%), Postives = 171/272 (62.87%), Query Frame = 1 

Query: 4   MKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLAQ 63
           +KA+NS   P  GV+++ ++    W G VD  V   DDF +VL M+FL +   + +P  +
Sbjct: 395 LKAVNSAAKPSHGVAREVTMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVXAVPLPFLR 454

Query: 64  YMVVTSNN-----PTVIQAKIKQP--------SGIETRIVPI------------------ 123
            M +         PTV +   K P         G++   V                    
Sbjct: 455 SMAILEEEKPCMVPTVTEGTPKTPMLSAMQVKKGLKREEVTYLATLKEEKDDGSGEPMLK 514

Query: 124 EIQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRK 183
           EI++VL+++ D+MP ELPK LP R+E  DH+IEL LGA  KPP    YRMAP EL ELR+
Sbjct: 515 EIKRVLDEFKDVMPPELPKRLPPRREE-DHKIELELGA--KPPAMGPYRMAPPELEELRR 574

Query: 184 QLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFD 243
           QL E L A FI+P+KAPYG PVLFQKK D SL++CIDYRALNKVTV+N+YP P+I DLFD
Sbjct: 575 QLKELLDAGFIQPSKAPYGAPVLFQKKHDGSLQMCIDYRALNKVTVKNKYPIPLIADLFD 634

Query: 244 QLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           QL  A+YFTKLDL+SGYYQVRIA+GD PKTTC
Sbjct: 635 QLGRARYFTKLDLRSGYYQVRIAEGDEPKTTC 663

[Close]
BLAST of MELO3C014862 vs. TrEMBL
Match: A5AZ16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016761 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.0e-59
Identity = 134/272 (49.26%), Postives = 170/272 (62.50%), Query Frame = 1 

Query: 4   MKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLAQ 63
           +KA+NS   P  GV++  ++    W G VD  V   D F +VL ++FL + K + +P  +
Sbjct: 436 LKAVNSAAKPSHGVARGVTMHIGSWEGRVDFTVAPMDHFKMVLGIDFLQKVKAVPLPFLR 495

Query: 64  YMVVTSNN-----PTVIQAKIKQP--------SGIETRIV------------------PI 123
            M +         PTV +  +K P         G++   V                  P 
Sbjct: 496 SMAILEEEKSCMVPTVTEGTLKTPMLSTMQVKKGLKREEVTYLATLKEERDDGSGEPMPK 555

Query: 124 EIQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRK 183
           EI+ VL+++ D+MP ELPK LP R+E  DH+IEL  G+  KPP    YRMAP EL ELR+
Sbjct: 556 EIEGVLDEFKDVMPPELPKRLPPRREE-DHKIELEPGS--KPPAMGPYRMAPPELEELRR 615

Query: 184 QLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFD 243
           QL E L A FI+P+KAPYG PVLFQKK D SLR+CIDYRALNKVTV+N+YP P+I DLFD
Sbjct: 616 QLKELLDAGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFD 675

Query: 244 QLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           QL  A+YFTKLDL+SGYYQVRIA+GD PKTTC
Sbjct: 676 QLGRAKYFTKLDLRSGYYQVRIAEGDEPKTTC 704

[Close]
BLAST of MELO3C014862 vs. TrEMBL
Match: A5AN22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021534 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.5e-59
Identity = 133/272 (48.90%), Postives = 170/272 (62.50%), Query Frame = 1 

Query: 4   MKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLAQ 63
           +KA+NS   P  GV++  ++    W+G V+  V   DDF +VL M+FL + K + +P  +
Sbjct: 365 LKAVNSTAKPSHGVARGVTMHIGSWKGRVNFTVAPMDDFKMVLRMDFLQKAKAVPLPFLR 424

Query: 64  YMVVTSNNP-----TVIQAKIKQP--------SGIETRIV------------------PI 123
            M +          TV +  +K P         G++ + V                  P 
Sbjct: 425 LMAILEEEKSCMVHTVTEGTLKTPMLSAMQVKKGLKRKKVTYLATLKEERDDGSGEPMPK 484

Query: 124 EIQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRK 183
           EI+ VL+++ D+MP ELPK LP R+E  DH+IEL     TKPP    YRMAP EL ELR+
Sbjct: 485 EIKGVLDEFKDVMPPELPKRLPPRREE-DHKIELE--PETKPPAMGPYRMAPPELEELRR 544

Query: 184 QLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFD 243
           QL E L A FI+P+K PYG PVLFQKK D SLR+CIDYRALNKVTV+N+YP P+I DLFD
Sbjct: 545 QLKELLDAGFIQPSKVPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIVDLFD 604

Query: 244 QLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           QL  A+YFTKLDL+SGYYQVRIA+GD PKTTC
Sbjct: 605 QLGRARYFTKLDLRSGYYQVRIAEGDEPKTTC 633

[Close]
BLAST of MELO3C014862 vs. TrEMBL
Match: A5BDH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.0e-58
Identity = 134/272 (49.26%), Postives = 166/272 (61.03%), Query Frame = 1 

Query: 4   MKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLAQ 63
           +KA+NS   P  GV++  S+    W G VD  V   DDF +VL M+FL + K + +P  +
Sbjct: 479 LKAVNSAAKPSHGVARGVSMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLR 538

Query: 64  YMVVTSNN-----PTVIQAKIKQP--------SGIETRIV------------------PI 123
            M +         PTV +  +K P         G++   V                  P 
Sbjct: 539 SMAILEEEKPCMVPTVTEGTLKTPMLSAMQVKKGLKREEVTYLATLKEERDDGLREPMPK 598

Query: 124 EIQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRK 183
           EI+ VL+++ D+MP ELPK LP R+E  DH+IEL  GA  KPP    YRMAP EL ELR+
Sbjct: 599 EIEGVLDEFKDVMPPELPKRLPPRREE-DHKIELEPGA--KPPAMGPYRMAPPELEELRR 658

Query: 184 QLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFD 243
           QL E L   FI+P+KAPYG PVLFQKK D SLR+CIDYRALNKVTV+N+YP P+I DLFD
Sbjct: 659 QLKELLDVGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFD 718

Query: 244 QLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           QL  A YFTKLDL+ GYYQVRI +GD  KTTC
Sbjct: 719 QLGRASYFTKLDLRLGYYQVRIVEGDESKTTC 747

[Close]
BLAST of MELO3C014862 vs. TrEMBL
Match: A5AUJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.5e-58
Identity = 131/276 (47.46%), Postives = 172/276 (62.32%), Query Frame = 1 

Query: 2   SKMKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMP- 61
           S++KA+NSK   I GV+K   +K  +W G   L+ V  DDFD++L ++FLL+ KV ++P 
Sbjct: 406 SRIKAVNSKAQKIQGVAKNVPMKIGDWEGMCSLLCVPLDDFDLILGVDFLLRAKVALIPH 465

Query: 62  LAQYMVVTSNNP-------------------TVIQAKIKQPSGIETRI------------ 121
           L   MV+    P                   + IQ K     G ET +            
Sbjct: 466 LGGLMVLEEKQPCFVQALRAKDGGKGQPEMLSAIQLKKGLKRGQETYVAALIEIKEGQTM 525

Query: 122 -VPIEIQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELA 181
            VP  + K+L ++ D+MP ELPK LP R+ I DH+IEL+ G  TK P +  YRM+P EL 
Sbjct: 526 EVPDSVVKILKEFSDVMPAELPKELPPRRPI-DHKIELLPG--TKAPAQAPYRMSPAELL 585

Query: 182 ELRKQLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIIN 241
           ELRKQL E L A  I+P++APYG PVLFQKK D SLR+C+DYRALNKVT++N+YP P+  
Sbjct: 586 ELRKQLKELLDAGLIQPSRAPYGAPVLFQKKHDGSLRMCVDYRALNKVTIKNKYPIPLAA 645

Query: 242 DLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           +LFD+L  A YFTKLDL+SGY+QVR+A GD  KTTC
Sbjct: 646 ELFDRLSKASYFTKLDLRSGYWQVRVAAGDEGKTTC 678

[Close]
BLAST of MELO3C014862 vs. NCBI nr
Match: gi|659114583|ref|XP_008457127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 1.1e-69
Identity = 143/234 (61.11%), Postives = 170/234 (72.65%), Query Frame = 1 

Query: 40  DDFDVVLDMEFLLQHKVIIMPLAQYMVVTSNNPTVIQAKIKQPSGIET------------ 99
           DDFDVVL MEFLL+H+VI+MPLA+ +V+T   P+V+Q  ++QP G++             
Sbjct: 2   DDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLSR 61

Query: 100 -----------------RIVPIEIQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGA 159
                              VP EI +VL KY D+MP   PK+LP R+ ++DHEIELV G 
Sbjct: 62  DEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRR-MIDHEIELVPG- 121

Query: 160 RTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDY 219
            TKP  KNAYRMAP ELAELRKQL+E L A FI+PAKAPYG PVLFQKKKD SLRLCIDY
Sbjct: 122 -TKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDY 181

Query: 220 RALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           RALNK+TVRN+YP PII DLFD+L GA+YF+KLDL+SGYYQVRIA+GD PKTTC
Sbjct: 182 RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTC 232

[Close]
BLAST of MELO3C014862 vs. NCBI nr
Match: gi|1009180560|ref|XP_015871689.1| (PREDICTED: uncharacterized protein LOC107408784 [Ziziphus jujuba])

HSP 1 Score: 265.8 bits (678), Expect = 7.6e-68
Identity = 144/271 (53.14%), Postives = 181/271 (66.79%), Query Frame = 1 

Query: 3   KMKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLA 62
           +MKA+NSK LP VG++K+  LK   W   VDL+VV  DDFDV+L M+FL++ K I +P A
Sbjct: 324 QMKAINSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAA 383

Query: 63  QYMVVTS-------------NNPTVIQA-------KIKQPS---------GIETRIVPIE 122
             +++               NNP ++ A       + K+PS         G +    P  
Sbjct: 384 NSLLMMGEQTGVVPVQRKQLNNPKLLSALQFKKGVRCKEPSYIALVVAREGEDDETTPPM 443

Query: 123 IQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQ 182
           +   L  + D+MP  LP+ LP R++I DH IEL+ GA  KPP K  YRMAP ELAELRKQ
Sbjct: 444 VLDALKSFNDVMPDNLPRNLPPRRDI-DHNIELIPGA--KPPAKAPYRMAPPELAELRKQ 503

Query: 183 LNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQ 242
           L E L A F++P+KAPYG PVLFQKKKD +LRLC+DYRALNKVTVRN+YP P+I DLFDQ
Sbjct: 504 LEELLEAGFLRPSKAPYGAPVLFQKKKDGTLRLCVDYRALNKVTVRNKYPIPLIADLFDQ 563

Query: 243 LDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           L GA++FTKLDL+SGYYQVRIA+GD  KTTC
Sbjct: 564 LSGAKFFTKLDLRSGYYQVRIAEGDEEKTTC 591

[Close]
BLAST of MELO3C014862 vs. NCBI nr
Match: gi|1009161831|ref|XP_015899105.1| (PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba])

HSP 1 Score: 265.0 bits (676), Expect = 1.3e-67
Identity = 144/271 (53.14%), Postives = 181/271 (66.79%), Query Frame = 1 

Query: 3   KMKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLA 62
           +MKA+NSK LP VG++K+  LK   W   VDL+VV  DDFDV+L M+FL++ K I +P A
Sbjct: 300 QMKAVNSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAA 359

Query: 63  QYMVVTS-------------NNPTVIQA-------KIKQPS---------GIETRIVPIE 122
             +++               NNP ++ A       + K+PS         G +    P  
Sbjct: 360 NSLLMMGEQTGVVPVQRKQLNNPKLLSAFQFKKGVRRKEPSYIALVVAREGEDDETTPPM 419

Query: 123 IQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQ 182
           +   L  + D+MP  LP+ LP R++I DH IEL+ GA  KPP K  YRMAP ELAELRKQ
Sbjct: 420 VLDALKSFNDVMPDNLPRNLPPRRDI-DHNIELIPGA--KPPAKALYRMAPPELAELRKQ 479

Query: 183 LNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQ 242
           L E L A F++P+KAPYG PVLFQKKKD +LRLC+DYRALNKVTVRN+YP P+I DLFDQ
Sbjct: 480 LGELLEAGFLRPSKAPYGAPVLFQKKKDGTLRLCVDYRALNKVTVRNKYPIPLIADLFDQ 539

Query: 243 LDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           L GA++FTKLDL+SGYYQVRIA+GD  KTTC
Sbjct: 540 LSGAKFFTKLDLRSGYYQVRIAEGDEEKTTC 567

[Close]
BLAST of MELO3C014862 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba])

HSP 1 Score: 265.0 bits (676), Expect = 1.3e-67
Identity = 144/271 (53.14%), Postives = 181/271 (66.79%), Query Frame = 1 

Query: 3   KMKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLA 62
           +MKA+NSK LP VG++K+  LK   W   VDL+VV  DDFDV+L M+FL++ K I +P A
Sbjct: 658 QMKAVNSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAA 717

Query: 63  QYMVVTS-------------NNPTVIQA-------KIKQPS---------GIETRIVPIE 122
             +++               NNP ++ A       + K+PS         G +    P  
Sbjct: 718 NSLLMMGEQTGVIPVQRKQLNNPKLLSALQFKKGVRRKEPSYIALVVAREGEDDETTPPM 777

Query: 123 IQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQ 182
           +   L  + D+MP  LP+ LP R++I DH IEL+ GA  KPP K  YRMAP ELAELRKQ
Sbjct: 778 VLDALKSFNDVMPDNLPRNLPPRRDI-DHNIELIPGA--KPPAKAPYRMAPPELAELRKQ 837

Query: 183 LNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQ 242
           L E L A F++P+KAPYG PVLFQKKKD +LRLC+DYRALNKVTVRN+YP P+I DLFDQ
Sbjct: 838 LGELLEAGFLRPSKAPYGAPVLFQKKKDGTLRLCVDYRALNKVTVRNKYPIPLIADLFDQ 897

Query: 243 LDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           L GA++FTKLDL+SGYYQVRIA+GD  KTTC
Sbjct: 898 LSGAKFFTKLDLRSGYYQVRIAEGDEEKTTC 925

[Close]
BLAST of MELO3C014862 vs. NCBI nr
Match: gi|1009176455|ref|XP_015869440.1| (PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba])

HSP 1 Score: 247.3 bits (630), Expect = 2.8e-62
Identity = 134/271 (49.45%), Postives = 177/271 (65.31%), Query Frame = 1 

Query: 4   MKAMNSKILPIVGVSKKASLKFDEWRGDVDLVVVCTDDFDVVLDMEFLLQHKVIIMPLAQ 63
           +K +N++  P+ G+++   L    W+G+V+  +   DDFD+VL MEFL Q  V+  PL +
Sbjct: 298 LKTVNAEAKPLDGMARNVELHLGTWQGNVNFSIAPLDDFDIVLGMEFLRQFNVV--PLPR 357

Query: 64  YMVV-----------------TSNNPTVIQAK-------------IKQPSGIETRIVPIE 123
           Y  V                 TSN  + +Q K             +++   + ++  P E
Sbjct: 358 YNTVCIMEGGPCMIPTIHKPSTSNRLSAMQLKKGVKKGEPTFLATLREEEEVTSKEPPKE 417

Query: 124 IQKVLNKYVDIMPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQ 183
           + +VL ++ D+MP +LPK LP R+E+ DH IEL  GA  KPP K  YRM+P EL ELR+Q
Sbjct: 418 VSQVLEEFKDVMPPQLPKKLPPRREV-DHCIELEPGA--KPPAKAPYRMSPSELEELRRQ 477

Query: 184 LNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQ 243
           L E L A +I+P+KAPYG PVLFQKK D SLRLCIDYRALNKVT++N+YP P+I DLFDQ
Sbjct: 478 LKELLDAGYIQPSKAPYGAPVLFQKKHDGSLRLCIDYRALNKVTIKNKYPIPLIADLFDQ 537

Query: 244 LDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC 245
           L GA+YFTKLDL+SGYYQVRIA+GD PKTTC
Sbjct: 538 LGGARYFTKLDLRSGYYQVRIAEGDEPKTTC 563

The following BLAST results are available for this feature:
BLAST of MELO3C014862 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YG31B_YEAST1.2e-2037.01Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
YI31B_YEAST1.2e-2037.01Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
RRPO_OENBE7.7e-2070.97RNA-directed DNA polymerase homolog OS=Oenothera berteroana PE=4 SV=1[more]
TF29_SCHPO3.2e-1828.50Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF23_SCHPO3.2e-1828.50Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of MELO3C014862 vs. TrEMBL
Match NameE-valueIdentityDescription
A5B4X8_VITVI4.1e-6049.63Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1[more]
A5AZ16_VITVI2.0e-5949.26Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016761 PE=4 SV=1[more]
A5AN22_VITVI4.5e-5948.90Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021534 PE=4 SV=1[more]
A5BDH9_VITVI1.0e-5849.26Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1[more]
A5AUJ7_VITVI6.5e-5847.46Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1[more]
BLAST of MELO3C014862 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114583|ref|XP_008457127.1|1.1e-6961.11PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis me... [more]
gi|1009180560|ref|XP_015871689.1|7.6e-6853.14PREDICTED: uncharacterized protein LOC107408784 [Ziziphus jujuba][more]
gi|1009161831|ref|XP_015899105.1|1.3e-6753.14PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba][more]
gi|1009175511|ref|XP_015868924.1|1.3e-6753.14PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba][more]
gi|1009176455|ref|XP_015869440.1|2.8e-6249.45PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014862T1MELO3C014862T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 131..233
score: 1.4
NoneNo IPR availablePANTHERPTHR10178GAG/POL/ENV POLYPROTEINcoord: 41..242
score: 1.5
NoneNo IPR availablePANTHERPTHR10178:SF283SUBFAMILY NOT NAMEDcoord: 41..242
score: 1.5
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 97..243
score: 2.45