MELO3C014740 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014740
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, unclassified, expressed
Location	chr6 : 18481122 .. 18482198 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGAGCATCGAAAGACTAGGCATCCAAGCGAAGAAACAACAACACCAGCAACAATTGCTTCTGAAATACATTGAAGGAATGGTGAAGGCGAAGTCAAATATTAGTGAAGGCATGGAACGCTCATCAAGTAAGGGACATTCGATTGAAAGATTCATTGAAGGGGGAAATGCAACGATGAAGGAAGTGACATCCAAAGGGAAGAAAAGTCAATCTGAAGGAGAGGTTAATTTGGCCGATCAAAACAAATTCAAGAAGGTGGAAATGCCGGTCTTCAGCAGCAAGAATCCAGATTCGTAGTTGTGCAGGGCCGATCGTTACTTTCAGAAACAAAAGTTAACGTATTCAAAGAAGAGAATGGTGGTTGTGATCAATTTCGACGGTCTGGCATTGGATTGGTATAGATCACAAGAAGAGCGTGAACTCTTCCAGGATTGGGCAAACCTAAAGCGACAGTTATTAGTTCAATTTCCATCGGTGAGGGAGGGATCCATTTGTGGGAGGTTTTTGGCCATTAAACAAGAAACGACTATCGAAGAATATCGAAATTTGTTTAACAAGTTGGTGGCTCTATTGCCTTACTTGCCAAACGAAGTACTGGAGGAAACGTTCATGAATGGGCTTAGCCCACATATCAAGGTTGAAATGGAATGTTGGAATTCAGTTGGGCTCGCTCAAATGATGAAATTGGCCCAGCGCATTAAAAACAAGGAGATTACAAGGAGAGAAGTCGGCTTCAAAGGGAGTCCTGGAGGTAAGGTCCAAACTAGTATCCCTACCGTTAAAACTAACTTACCAGTGAATGTAAATGAATCGAATACGGGAGGGAACTTTCCAATGCAACCTATAACCTTGCGAGGTGTGACTGCGGGTGAGAATCAATGTGAAGGACCATCAAAAAGGCTAACAAATGCTGAATTCCAAGCTCAGAGGGAAAAGGGCCTTTGTTTACGATGTGAAGAAAAATATCATGTCAGCCACCGTTGTAAAGTGAAGGAACAGGAGGAATTGAGGGTCCTGGTGGTGCGAGAAAATGGGGAGGAAGTAGAGATAATTGAGGAAGACTATAATTAG

mRNA sequence

ATGGCAAAGAGCATCGAAAGACTAGGCATCCAAGCGAAGAAACAACAACACCAGCAACAATTGCTTCTGAAATACATTGAAGGAATGGTGAAGGCGAAGTCAAATATTAGTGAAGGCATGGAACGCTCATCAAGTAAGGGACATTCGATTGAAAGATTCATTGAAGGGGGAAATGCAACGATGAAGGAAGTGACATCCAAAGGGAAGAAAAGTCAATCTGAAGGAGAGGTTAATTTGGCCGATCAAAACAAATTCAAGAAGAAACAAAAGTTAACGTATTCAAAGAAGAGAATGGTGGTTGTGATCAATTTCGACGGTCTGGCATTGGATTGGTATAGATCACAAGAAGAGCGTGAACTCTTCCAGGATTGGGCAAACCTAAAGCGACAGTTATTAGTTCAATTTCCATCGGTGAGGGAGGGATCCATTTGTGGGAGGTTTTTGGCCATTAAACAAGAAACGACTATCGAAGAATATCGAAATTTGTTTAACAAGTTGGTGGCTCTATTGCCTTACTTGCCAAACGAAGTACTGGAGGAAACGTTCATGAATGGGCTTAGCCCACATATCAAGGTTGAAATGGAATGTTGGAATTCAGTTGGGCTCGCTCAAATGATGAAATTGGCCCAGCGCATTAAAAACAAGGAGATTACAAGGAGAGAAGTCGGCTTCAAAGGGAGTCCTGGAGGTAAGGTCCAAACTAGTATCCCTACCGTTAAAACTAACTTACCAGTGAATGTAAATGAATCGAATACGGGAGGGAACTTTCCAATGCAACCTATAACCTTGCGAGGTGTGACTGCGGGTGAGAATCAATGTGAAGGACCATCAAAAAGGCTAACAAATGCTGAATTCCAAGCTCAGAGGGAAAAGGGCCTTTGTTTACGATGTGAAGAAAAATATCATGTCAGCCACCGTTGTAAAGTGAAGGAACAGGAGGAATTGAGGGTCCTGGTGGTGCGAGAAAATGGGGAGGAAGTAGAGATAATTGAGGAAGACTATAATTAG

Coding sequence (CDS)

ATGGCAAAGAGCATCGAAAGACTAGGCATCCAAGCGAAGAAACAACAACACCAGCAACAATTGCTTCTGAAATACATTGAAGGAATGGTGAAGGCGAAGTCAAATATTAGTGAAGGCATGGAACGCTCATCAAGTAAGGGACATTCGATTGAAAGATTCATTGAAGGGGGAAATGCAACGATGAAGGAAGTGACATCCAAAGGGAAGAAAAGTCAATCTGAAGGAGAGGTTAATTTGGCCGATCAAAACAAATTCAAGAAGAAACAAAAGTTAACGTATTCAAAGAAGAGAATGGTGGTTGTGATCAATTTCGACGGTCTGGCATTGGATTGGTATAGATCACAAGAAGAGCGTGAACTCTTCCAGGATTGGGCAAACCTAAAGCGACAGTTATTAGTTCAATTTCCATCGGTGAGGGAGGGATCCATTTGTGGGAGGTTTTTGGCCATTAAACAAGAAACGACTATCGAAGAATATCGAAATTTGTTTAACAAGTTGGTGGCTCTATTGCCTTACTTGCCAAACGAAGTACTGGAGGAAACGTTCATGAATGGGCTTAGCCCACATATCAAGGTTGAAATGGAATGTTGGAATTCAGTTGGGCTCGCTCAAATGATGAAATTGGCCCAGCGCATTAAAAACAAGGAGATTACAAGGAGAGAAGTCGGCTTCAAAGGGAGTCCTGGAGGTAAGGTCCAAACTAGTATCCCTACCGTTAAAACTAACTTACCAGTGAATGTAAATGAATCGAATACGGGAGGGAACTTTCCAATGCAACCTATAACCTTGCGAGGTGTGACTGCGGGTGAGAATCAATGTGAAGGACCATCAAAAAGGCTAACAAATGCTGAATTCCAAGCTCAGAGGGAAAAGGGCCTTTGTTTACGATGTGAAGAAAAATATCATGTCAGCCACCGTTGTAAAGTGAAGGAACAGGAGGAATTGAGGGTCCTGGTGGTGCGAGAAAATGGGGAGGAAGTAGAGATAATTGAGGAAGACTATAATTAG

Protein sequence

MAKSIERLGIQAKKQQHQQQLLLKYIEGMVKAKSNISEGMERSSSKGHSIERFIEGGNATMKEVTSKGKKSQSEGEVNLADQNKFKKKQKLTYSKKRMVVVINFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAIKQETTIEEYRNLFNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQRIKNKEITRREVGFKGSPGGKVQTSIPTVKTNLPVNVNESNTGGNFPMQPITLRGVTAGENQCEGPSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEEVEIIEEDYN*

Homology

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BLAST of MELO3C014740 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.9e-36
Identity = 92/236 (38.98%), Postives = 134/236 (56.78%), Query Frame = 1


Query: 91   LTYSKKRMVVVINFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAI 150
            LT  +K +   ++ DG AL WY+  + RE+F  W NLKR+LL++F   +EGS+C +FLA+
Sbjct: 799  LTEEEKLVAAAMSLDGDALSWYQWTDSREVFGSWENLKRRLLLRFRLTQEGSLCEQFLAV 858

Query: 151  KQETTIEEYRNLFNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQ 210
            +Q+ T+  Y   F  L   L  +  EV+E TFMNGL P I+ E       GL  +M++AQ
Sbjct: 859  RQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQ 918

Query: 211  RIKNKEITRREVGFKGSPGGKVQTSIPTVKTNLPVNVNESNTGGNFPMQPITLRGVTAGE 270
            R++++ +  R       P G   T + +       N  E   G NF  + + +   T  +
Sbjct: 919  RVEDRNLAMRAA---REPNGPKSTKMLST-----ANRGEWKIGENFQTRAVAVGEKTMSQ 978

Query: 271  NQCEGPSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEE 327
             + E P KRLT +E QA+REKGL  +CEEK+   HRCK    +ELRVL+V E+ EE
Sbjct: 979  RR-EIPIKRLTESELQARREKGLWFKCEEKFSPGHRCK----KELRVLLVHEDEEE 1021

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BLAST of MELO3C014740 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.5e-30
Identity = 104/342 (30.41%), Postives = 166/342 (48.54%), Query Frame = 1


Query: 10  IQAKKQQHQQ-QLLLKYIEGMVKAKSNISEGMERSSSKGHSIERFIEGGNATMKEVTSKG 69
           I+A KQ+ Q+  LL K +E M    S I E  +R +  G  +     G      E  ++ 
Sbjct: 17  IEAIKQEVQRLPLLEKNLEKMHAMLSVIYEDRQRQTG-GSKLTGISTGKRKVRNEEVTE- 76

Query: 70  KKSQSEGEVNLADQNKFKKKQKLTYSKKRMVV--VINFDGLALDWYRSQEERELFQDWAN 129
            +   EGE +L+ + +  +K +  + K  M V  V++ +G  ++W+R  E R+ F+ W  
Sbjct: 77  -EEGEEGETSLSVETEAGQK-RFKFRKLEMPVFNVVSLEGRGMNWFRWAENRKWFRSWKE 136

Query: 130 LKRQLLVQFPSVREGSICGRFLAIKQETTIEEYRNLFNKLVALLPYLPNEVLEETFMNGL 189
           LK ++  +F     G+ C RFLAIKQE ++ EY   F +L A LP +  EVLE TF NGL
Sbjct: 137 LKERMYNRFRCRDYGTACARFLAIKQEGSVSEYLQKFEELSAPLPEMAEEVLEGTFTNGL 196

Query: 190 SPHIKVEMECWNSVGLAQMMKLAQRIK---------------NKEITRREVGFKGSPGGK 249
            P I+ E+     VGL  +M+ AQ  +               +KE  +  +G      G 
Sbjct: 197 DPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKEAAKTNLGSSPKTFGS 256

Query: 250 VQTSIPTVKTNLPVNVNESNTGGNFPMQPITLRGVTAGENQCEGPSKRLTNAEFQAQREK 309
             T + T+   +    + SNT  +             G  + E   +R  +++ QA++EK
Sbjct: 257 PPTKMVTLAKKVVNQTSNSNTSQSH---------TVGGGGRREPSYRRWIDSKLQARKEK 316

Query: 310 GLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEEVEIIEED 334
           GLC RC++ +   HRCK     EL++ VV ++  + E+ EED
Sbjct: 317 GLCYRCDKPFSKGHRCK---NRELKLCVVADDLIDTEMSEED 342

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BLAST of MELO3C014740 vs. TrEMBL
Match: W9R6D8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026170 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28
Identity = 80/251 (31.87%), Postives = 135/251 (53.78%), Query Frame = 1


Query: 91  LTYSKKRMVVVINFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAI 150
           L+ ++K  V +++ DG AL W++ ++ R++ ++WA LK           EGS+C + L++
Sbjct: 25  LSENEKLEVAIVSLDGEALAWFQGEDGRQMIRNWAELK-----------EGSLCEKLLSL 84

Query: 151 KQETTIEEYRNLFNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQ 210
           +QE+++ +YR  F  L A L  +  +VLE +F+N L P ++ E+     + L ++M++AQ
Sbjct: 85  RQESSVRKYRRQFEVLAAPLRDVSEQVLESSFVNRLKPEVRAEIRLMKPIWLGRIMEVAQ 144

Query: 211 RIKNKEI-------TRREVGFKGSPGGKVQTSIPTVKTNLPVNVNESNTGGNF---PMQP 270
           R++ + +            GF  + GG+  T+              S +G  F   P + 
Sbjct: 145 RVEERNLMVCGPKPKAHRSGFNETKGGQTTTN--------------SGSGLRFYEAPTEK 204

Query: 271 ITLRGVTAGENQCEG--PSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVL 330
             +       NQ  G  P +R+ +AE QA+REKGLC RC+ KY+V HRC      EL+VL
Sbjct: 205 GKILDKRKAINQDTGAAPFRRMIDAELQAKREKGLCYRCDGKYYVGHRC---PNRELQVL 247

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BLAST of MELO3C014740 vs. TrEMBL
Match: B9T325_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0327000 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.9e-24
Identity = 72/241 (29.88%), Postives = 121/241 (50.21%), Query Frame = 1


Query: 105 DGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAIKQETTIEEYRNLFN 164
           +G AL W++ +E R  F+ W + K  L+V F S +EG++  + LA+KQ TT++E+R  F 
Sbjct: 148 EGDALAWFQWEEGRRPFRSWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFRRQFE 207

Query: 165 KLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQRIKNK--------E 224
            + A L  L  +VLE  F+NGL P ++ E+  W+  GL + M++AQ+I+ K        +
Sbjct: 208 IIAAPLKGLAEDVLEAAFVNGLRPDMQAELRQWSPFGLDKKMQVAQKIEEKLKALGQYNQ 267

Query: 225 ITRREVGFKGSPGGKVQTSIPTVKTNLPVNVNE-----SNTGGNFPMQPITLRGVTAGEN 284
            T+         G      +  V T   +  N      +++  +   +P      + G N
Sbjct: 268 TTQNRWANSTPSGTHFTNKVTQVSTTPSIKPNHFPKSFTSSSNSTVAKPSGSVSTSTGSN 327

Query: 285 QCEGPSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEEVEIIE 333
               P K++++ E +A R KGL  RC+ +Y   HRC  K  + L V+      EE+  +E
Sbjct: 328 NTRPPFKQMSHGEMEACRLKGLYYRCDGRYDPGHRCPNKSLKILCVINGSSEEEEMTKVE 387

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BLAST of MELO3C014740 vs. TrEMBL
Match: A0A0D3A714_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.9e-24
Identity = 76/242 (31.40%), Postives = 119/242 (49.17%), Query Frame = 1


Query: 104 FDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAIKQETTIEEYRNLF 163
           FDG AL WYR + +R  F+ W  +K Q+L Q+ S ++ S   R L ++Q  T+ EY + F
Sbjct: 165 FDGEALLWYRWERDRNPFRSWNQMKYQVLEQYSSNKDTSAGERLLTLRQTGTVREYCSDF 224

Query: 164 NKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQRIKNKEITRREVG 223
             L    P L  EVLE  F+ GL+  I+  ++ +   GL ++M+   ++++         
Sbjct: 225 KNLAMNAPELMEEVLELAFIVGLNTKIRAGVKLFEPRGLQKLMETVTKVEDWSSEGESSP 284

Query: 224 FKG-------------SPGGKVQTSIPTVKTNLPVNVNESNTGGNFPMQPITLRGVTAGE 283
            KG              P   VQT+ P      PV+ N +N  G            T   
Sbjct: 285 PKGGRSNSLGLSTTSPKPNSGVQTTTPNRSKPGPVSTNPNNRSGG---------RATTTL 344

Query: 284 NQCEGPSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEEVEII 333
            + + P +RLT  E    + +GLC +C+EK+H +H C    ++EL VLV R++G E E++
Sbjct: 345 GRLKPPFRRLTPEEVAKWQAEGLCFKCDEKWHRNHLC---SKQELTVLVTRDDGSETELL 394

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BLAST of MELO3C014740 vs. NCBI nr
Match: gi|659134102|ref|XP_008467029.1| (PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo])

HSP 1 Score: 261.9 bits (668), Expect = 1.5e-66
Identity = 148/356 (41.57%), Postives = 214/356 (60.11%), Query Frame = 1


Query: 1   MAKSIERLGIQAKKQQHQQQLLLKYIEGMVKAKSNISEGMERSSSKGHSIERFIEGGNAT 60
           + +++E + +Q++KQQ   Q +L Y+E   K +S   E M  S ++     +      ++
Sbjct: 37  LTRNMEMMRLQSEKQQ---QAILSYMEMNAKERSMAGERMNESDTQNSPTVKSKNDKASS 96

Query: 61  MKEVTSKGKKSQSEGEVNLADQNKFKKKQ-----------------------KLTYSKKR 120
            ++V     K ++E + N  D++KFKK +                       KLT S+K 
Sbjct: 97  SRDVEEINTK-KNEPDENSNDRSKFKKVEMPVFTGEDPESWLFRAERYFQIHKLTESEKM 156

Query: 121 MVVVINFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAIKQETTIE 180
           +V  I FDG AL+WYR+QEERE F  W NLK +LL++F S REG+  GRFL I+QETT+E
Sbjct: 157 LVSTICFDGPALNWYRAQEEREKFVSWTNLKERLLIRFQSTREGTAFGRFLRIQQETTVE 216

Query: 181 EYRNLFNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQRIKNKEI 240
           EYRNLF+KLVA L  + + V+EETFM+GL P I+ E+      GLA+MM+ AQ ++++E+
Sbjct: 217 EYRNLFDKLVAPLSDVEDRVVEETFMSGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREV 276

Query: 241 TRREVGFKGSPGGKVQTSIPTVKTNLPVNVNESN-TGGNFPMQPITLRGVTAGENQCEGP 300
            R      G  GGK  T   T   +     N+ N     FP++ ITL+   +GE + EG 
Sbjct: 277 LRNAANLNGYIGGKSSTPTSTGTKHYYHQQNKENKANAPFPIRTITLKSPNSGETRKEGT 336

Query: 301 SKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEEVEIIEE 333
           SKRL +AEFQ +REKGLC +C EKY   H+CK++EQ ELR+ VV++N EE+EI+EE
Sbjct: 337 SKRLPDAEFQLRREKGLCFKCNEKYSADHKCKMREQRELRMFVVKDNNEELEIVEE 388

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BLAST of MELO3C014740 vs. NCBI nr
Match: gi|659119521|ref|XP_008459701.1| (PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 3.7e-65
Identity = 146/363 (40.22%), Postives = 220/363 (60.61%), Query Frame = 1


Query: 1   MAKSIERLGIQAKKQQHQQQLLLKYIEGMVKAKSNISEGMERSSSKGHSIERFIEGGNAT 60
           +AKS++ + +Q++KQQ   QLL   IE   K +S +S      + K     +  E   ++
Sbjct: 37  IAKSVDLMRLQSEKQQ---QLLFTIIETSSKERSMMSGQATEPTVKEFEKAKGKESDASS 96

Query: 61  MKEVTSK------GKKSQSEGEVNLADQNKFKKKQ-----------------------KL 120
            + + S       G + +++ + +  D+NKFKK +                       +L
Sbjct: 97  SRMIESDRNFRADGSERRNDSDDSFPDRNKFKKIEMPIFTGEDPDSWLFRAERYFQIHRL 156

Query: 121 TYSKKRMVVVINFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAIK 180
           T S+K +V  ++FDG AL+WYRSQEER+ F  W+N+K +LLV+F S ++G++ G+FL IK
Sbjct: 157 TESEKLLVSTVSFDGPALNWYRSQEERDKFTSWSNMKERLLVRFRSNKDGTLSGQFLRIK 216

Query: 181 QETTIEEYRNLFNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQR 240
           QE+T+EEY NLF+K+VA +  LP  V+E+TFMNGL P ++ E+  +   GLA+MM++AQ 
Sbjct: 217 QESTVEEYINLFDKMVAPVNDLPERVIEDTFMNGLLPWVRSEVVFYRPKGLAEMMEVAQM 276

Query: 241 IKNKEITRREVGFKGSPGGKVQTSIPTVKTNLPVNV-NESNTGGNFPMQPITLRGVTAGE 300
           ++N+EI R E    G  GG++   I + +      V  ES +  +FP++ ITLR     E
Sbjct: 277 VENREIVRTEAKLNGYSGGRMTGQIGSNRKATSGGVAGESKSNTSFPIRTITLRSSAPTE 336

Query: 301 NQCEGPSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEEVEII 334
           N+ EG  KRL +AEFQA++EKGLC RC EKY   H+C++KEQ ELR+ VV E  EE EI+
Sbjct: 337 NRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLKEQRELRMFVVTEGREEYEIV 396

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BLAST of MELO3C014740 vs. NCBI nr
Match: gi|659109397|ref|XP_008454696.1| (PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 146/364 (40.11%), Postives = 214/364 (58.79%), Query Frame = 1


Query: 1   MAKSIERLGIQAKKQQHQQQLLLKYIEGMVKAKSNISEGMERSSSKGHSIERFIEGGNAT 60
           +AKS+E + +Q++KQQ   QLL   IE   K +S +S     S +K     +  E   ++
Sbjct: 37  IAKSLELMRLQSEKQQ---QLLFTIIETNSKERSTMSRLETESPAKEFEKMKGKEDDASS 96

Query: 61  MKEVTS------KGKKSQSEGEVNLADQNKFKKKQ-----------------------KL 120
            K + S           + +G+  ++D+NKFKK +                       KL
Sbjct: 97  SKAIDSGRNFGADRNDRRIDGDDGVSDRNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKL 156

Query: 121 TYSKKRMVVVINFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAIK 180
           T S+K +V  I+FDG AL+W+RSQEER+ F  W+N+K +LL++F S ++G++ G+FL IK
Sbjct: 157 TDSEKMLVSTISFDGPALNWFRSQEERDKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIK 216

Query: 181 QETTIEEYRNLFNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQR 240
           QE T+EEY NLF+K+VA +  LP  V+ +TFMNGL P ++ E+       LA+MM+ AQ 
Sbjct: 217 QEGTVEEYINLFDKMVAPVNDLPERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQM 276

Query: 241 IKNKEITRREVGFKGSPGGKVQTSIPTV--KTNLPVNVNESNTGGNFPMQPITLRGVTAG 300
           ++N+EI R E    G  GGK+ T+   V  KT+      ++     FP++ ITLR     
Sbjct: 277 VENREIARIEAKMSGYSGGKI-TAYNNVAGKTSTGGVAGDNKNNTVFPIRTITLRSSVPN 336

Query: 301 ENQCEGPSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEEVEI 334
           ENQ EG  KRL +AEFQA++EKGLC RC EKY   H+C+++EQ ELR+ VV    +E EI
Sbjct: 337 ENQREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTAERDEYEI 396

[Close]

BLAST of MELO3C014740 vs. NCBI nr
Match: gi|659118578|ref|XP_008459193.1| (PREDICTED: uncharacterized protein LOC103498388 [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43
Identity = 100/238 (42.02%), Postives = 153/238 (64.29%), Query Frame = 1


Query: 1   MAKSIERLGIQAKKQQHQQQLLLKYIEGMVKAKSNISEGMERSSSKGHSIERFIEGGNAT 60
           + KSI+ +  Q  KQQ   Q++LKYIEG+++  S+  +  E S+S   S       G+  
Sbjct: 29  LTKSIKEMNAQINKQQ---QVILKYIEGIIRDNSSAGKTTEGSTSHTKS-------GDTI 88

Query: 61  MKEVTSKGKKSQSEGEVNLADQNKFKKKQKLTYS------------------KKRMVVVI 120
           + EV    K +    ++N  D++KFKK +   ++                  +K  VVVI
Sbjct: 89  LSEVVDDSKTNTRHEDINPMDRSKFKKVEMPVFNGTNPDPWLFRADRFFKIHEKLTVVVI 148

Query: 121 NFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAIKQETTIEEYRNL 180
           +FDG ALDWYRS +E E F++W +LK+++LV+F ++++G++ G+F +IKQETT+EEYRN+
Sbjct: 149 SFDGSALDWYRSNDELEAFKNWDDLKQRILVRFRTIQDGTLGGKFFSIKQETTVEEYRNI 208

Query: 181 FNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQRIKNKEITRR 221
           F+KL+A L +L   VLEETFMNG SP +K E++  ++VG AQMMKLA +I+N+E+ RR
Sbjct: 209 FDKLLAPLAFLQTMVLEETFMNGFSPWLKTEVDTLDTVGFAQMMKLALKIENREMVRR 256

[Close]

BLAST of MELO3C014740 vs. NCBI nr
Match: gi|147854459|emb|CAN78588.1| (hypothetical protein VITISV_043911 [Vitis vinifera])

HSP 1 Score: 161.4 bits (407), Expect = 2.8e-36
Identity = 92/236 (38.98%), Postives = 134/236 (56.78%), Query Frame = 1


Query: 91   LTYSKKRMVVVINFDGLALDWYRSQEERELFQDWANLKRQLLVQFPSVREGSICGRFLAI 150
            LT  +K +   ++ DG AL WY+  + RE+F  W NLKR+LL++F   +EGS+C +FLA+
Sbjct: 799  LTEEEKLVAAAMSLDGDALSWYQWTDSREVFGSWENLKRRLLLRFRLTQEGSLCEQFLAV 858

Query: 151  KQETTIEEYRNLFNKLVALLPYLPNEVLEETFMNGLSPHIKVEMECWNSVGLAQMMKLAQ 210
            +Q+ T+  Y   F  L   L  +  EV+E TFMNGL P I+ E       GL  +M++AQ
Sbjct: 859  RQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQ 918

Query: 211  RIKNKEITRREVGFKGSPGGKVQTSIPTVKTNLPVNVNESNTGGNFPMQPITLRGVTAGE 270
            R++++ +  R       P G   T + +       N  E   G NF  + + +   T  +
Sbjct: 919  RVEDRNLAMRAA---REPNGPKSTKMLST-----ANRGEWKIGENFQTRAVAVGEKTMSQ 978

Query: 271  NQCEGPSKRLTNAEFQAQREKGLCLRCEEKYHVSHRCKVKEQEELRVLVVRENGEE 327
             + E P KRLT +E QA+REKGL  +CEEK+   HRCK    +ELRVL+V E+ EE
Sbjct: 979  RR-EIPIKRLTESELQARREKGLWFKCEEKFSPGHRCK----KELRVLLVHEDEEE 1021

The following BLAST results are available for this feature:

BLAST of MELO3C014740 vs. TrEMBL


Match Name	E-value	Identity	Description
A5B2I6_VITVI	1.9e-36	38.98	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1	[more]
E5GC18_CUCME	3.5e-30	30.41	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
W9R6D8_9ROSA	2.5e-28	31.87	Uncharacterized protein OS=Morus notabilis GN=L484_026170 PE=4 SV=1	[more]
B9T325_RICCO	2.9e-24	29.88	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0327000 PE=4 SV=1	[more]
A0A0D3A714_BRAOL	4.9e-24	31.40	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of MELO3C014740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659134102\|ref\|XP_008467029.1\|	1.5e-66	41.57	PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo]	[more]
gi\|659119521\|ref\|XP_008459701.1\|	3.7e-65	40.22	PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo]	[more]
gi\|659109397\|ref\|XP_008454696.1\|	2.5e-61	40.11	PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo]	[more]
gi\|659118578\|ref\|XP_008459193.1\|	1.4e-43	42.02	PREDICTED: uncharacterized protein LOC103498388 [Cucumis melo]	[more]
gi\|147854459\|emb\|CAN78588.1\|	2.8e-36	38.98	hypothetical protein VITISV_043911 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005162	Retrotrans_gag_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014740T1	MELO3C014740T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 99..187 score: 2.5
None	No IPR available	PANTHER	PTHR34482	FAMILY NOT NAMED	coord: 101..235 score: 3.3
None	No IPR available	PANTHER	PTHR34482:SF1	SUBFAMILY NOT NAMED	coord: 101..235 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014740	Cucumber (Gy14) v1	cgymeB003
MELO3C014740	Cucurbita maxima (Rimu)	cmameB243
MELO3C014740	Cucurbita moschata (Rifu)	cmomeB231
MELO3C014740	Wild cucumber (PI 183967)	cpimeB243
MELO3C014740	Cucumber (Chinese Long) v2	cumeB249
MELO3C014740	Watermelon (Charleston Gray)	mewcgB427
MELO3C014740	Watermelon (Charleston Gray)	mewcgB436
MELO3C014740	Watermelon (97103) v1	mewmB463
MELO3C014740	Watermelon (97103) v1	mewmB473
MELO3C014740	Cucurbita pepo (Zucchini)	cpemeB586
MELO3C014740	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C014740	Cucumber (Gy14) v2	cgybmeB212
MELO3C014740	Silver-seed gourd	carmeB0485
MELO3C014740	Cucumber (Chinese Long) v3	cucmeB249
MELO3C014740	Watermelon (97103) v2	mewmbB434
MELO3C014740	Watermelon (97103) v2	mewmbB443
MELO3C014740	Wax gourd	mewgoB535