MELO3C014728.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014728.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	phosphoglucan phosphatase LSF1, chloroplastic-like
Location	chr05 : 123032 .. 126146 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATTTAGGACCAAAGAAATCGAACGGAAGTCTCACTCTTCCTTCCTTCCTTGGAAATGCATTCACTATTACATCTAATCCCCTCTTGAGTGTGAGCAGTGAGCAGTGAGCAGTGAAGAATTTTGATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGGTTCCTCTCAGTTCAGCTTTTCTTCATCAATAACTATTTATTTCATACGCTTAGCAATTTTGAATTGTCAAAGAAAAAACTATAGGATGTGCTTTCGTCCATTACCTGCGACTTTTCAAAACGGTGTATGCAGGTTCAATGCATAACTTTTTCTTTAAACATCGTCCCTGAATCTTTATTTGTGGCGCCTGGATGAACCCTGAGATAGCGTGATCACCATCTCCGTTATATTAACCTTATGCGCTTTCGTTGCTATGTTCAAAATCACATATGAGACTAAAAGCTTATTTTGCAACATTCATCACTTCCGACGTTGAAATTATCACAATCTAGATAGGTTACAATAATACAACATGCAACTCATATCCTTGACACTAGAAGAAGATGAACAACGCTTCAAAATTGGATTCTTGTTGATTTCTGTATTCATCCTAATGGAAGTAAAATGAAGCTTCCACAGGTTAGAATTTTAATTGACCCAACTGTTTTAGTGAAAGGTGAATTATAATGCCATGTGCTCATAACTTCTGTCTTCTTGTTGTTGTTGCGTGGTGTATTTTTGTTTTAAAAGAAAGTTCAAAGAAGAAAAAAAAAAAAACAGAGAAGACTAGTTTGCATGATTTCTACATATCTCCAACAAACGTGGCTTAGCCTAGAATGAAAATGTGAAACAGAAATATCCTAGCAGAAACATTCGCAGCTTTTCTTCCATGGTTGGGATATGATAAACAAAATCGCTTCATCTATGCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGTTAGTTATCAATCACACTCAACACATGAATAACCCATAGCAAATGAAAATGAAGGATGATCAGATTTCTTATCTTAAATTGGCTGACGACTTGTATATATCTTAGTTCACAAAAAGACATAATACTCTTAACATCCTCTATAAATATGACCTTTATAAATTGTTTGTGATTGTTTTTTCAGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTATTAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCATTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTATCATGCAATACTTCGCAGTTAGCAGAATGTCAGTGAGGACTTATCTGGAAAATATGAGCTGCGAAACATTGATTTAGCATTTAAAATCTCTGCTATATTGTTGGCATATTATAGGTCTAATTGTTGTTACAGTTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAATGACCTACGCCAAGGGCTGCGTCTCTACAAGTATGTGGTGTATATCCAACTTATCCTCTCCCCGTATGGTTTACTTTTGTAGTGAAGACACATCAATGCCCAAATTCCTACTTTCTTTCTGTTTTTTCCCCTCAAGGAATGCTAAATATGAGGAAGCCTTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGGTAATGCTTTTGCTTTAATGTGGAATTTGTTGTAACAATATCTAAAATTGCAATCTCATGTTGAATATGAAACTTCGGCTTAGGTTGAGGTTGATGTAGATTATACAATAATTGTTGCCCATAGTTTATTTAGAAAAGTCATTTGTGAAATGAAATAAAAATAGTATTTCACTGAACTTCAATTTTAAATTAGAAAGAAATAGTAGATTTTGTTAAATGAATATTAGATTAGTGAGATTTAGCTACAATGCTTATTATTTCAAAGTACGCAATCCCATGACTTTAGTTTACCATACTTCGTATAGACCCATTTGTTTGTTTACGTTACCATCTTCCTAGACAAAATCACCCAAAATGGGGATAACTGATCCCCTATATAATGCTCAAACAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGGAGCAGGATTTGAAGACTTTAAGGTAACAACCGCTTCAAGTTTTGAAATAATATTACTTGCATTGGACAATTTGGGTGGAAGTTGTGAAAGTATTACTTGTATATTTGCCAGAGAGTTCGGACGGATCCTGATCTATCAAACCTAAGGGCATTAGAGGAATTTGAGCCTCTTGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCCATCAATGCCATCAAGTCCCTATTCGGCTTCAAAACATAAAAACAGACTCTTCTACATTAATCGTTTATTAAACAATTCACATTCTTGTTGTCACAACTTGTATATAAGTATCCTGAGCTTCTAGCTTTTAGACGAGTAACAAAAGAATTTCAAGGGAATTTGTTCCCATAAGGAAAAAACTTTACATATTCATATTGGTGATCCTATACACAGTATAGCTATGTTGAAGAAACCTGTTTGTGTTCAATTAATTCCAAGATAGTCAGTTTCTCTA

mRNA sequence

GTTATTTAGGACCAAAGAAATCGAACGGAAGTCTCACTCTTCCTTCCTTCCTTGGAAATGCATTCACTATTACATCTAATCCCCTCTTGAGTGTGAGCAGTGAGCAGTGAGCAGTGAAGAATTTTGATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTATTAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCATTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTATCATGCAATACTTCGCAGTTAGCAGAATGTCAGTGAGGACTTATCTGGAAAATATGAGCTGCGAAACATTGATTTAGCATTTAAAATCTCTGCTATATTGTTGGCATATTATAGGTCTAATTGTTGTTACAGTTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAATGACCTACGCCAAGGGCTGCGTCTCTACAAGAATGCTAAATATGAGGAAGCCTTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGGAGCAGGATTTGAAGACTTTAAGAGAGTTCGGACGGATCCTGATCTATCAAACCTAAGGGCATTAGAGGAATTTGAGCCTCTTGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCCATCAATGCCATCAAGTCCCTATTCGGCTTCAAAACATAAAAACAGACTCTTCTACATTAATCGTTTATTAAACAATTCACATTCTTGTTGTCACAACTTGTATATAAGTATCCTGAGCTTCTAGCTTTTAGACGAGTAACAAAAGAATTTCAAGGGAATTTGTTCCCATAAGGAAAAAACTTTACATATTCATATTGGTGATCCTATACACAGTATAGCTATGTTGAAGAAACCTGTTTGTGTTCAATTAATTCCAAGATAGTCAGTTTCTCTA

Coding sequence (CDS)

ATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTATTAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCATTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTATCATGCAATACTTCGCAGTTAG

Protein sequence

MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQVSECFLLANSILLRQVTSPFSFLIFLSLASKYHAILRS

Homology

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BLAST of MELO3C014728.2 vs. NCBI nr
Match: XP_008449894.1 (PREDICTED: uncharacterized protein LOC103491636 isoform X1 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 4.8e-95
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSXXXXXXXX 60
           MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSXXXXXXXX
Sbjct: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSXXXXXXXX 60

Query: 61  XXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120
           XXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF
Sbjct: 61  XXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120

Query: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180
           ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE
Sbjct: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180

Query: 181 LTEKEIIRAERNSGVVSNKVREIQV 206
           LTEKEIIRAERNSGVVSNKVREIQ+
Sbjct: 181 LTEKEIIRAERNSGVVSNKVREIQL 205

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BLAST of MELO3C014728.2 vs. NCBI nr
Match: XP_004149641.1 (PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus] >KGN54020.1 hypothetical protein Csa_4G268040 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 5.7e-88
Identity = 194/207 (93.72%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSS--SSSFILCSQSHSHPKLSHPPFSTSXXXXXX 60
           MF TMSLAP YLYSS LLPKICPPNHSS     FILCSQSHSHPKLSH PFSTSXXXXXX
Sbjct: 1   MFNTMSLAPPYLYSSHLLPKICPPNHSSXXXXXFILCSQSHSHPKLSHLPFSTSXXXXXX 60

Query: 61  XXXXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120
           XXXXPFILRASDTEXXXXXXXXXXX  PYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  XXXXPFILRASDTEXXXXXXXXXXXQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 121 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180
           GFADKTGLFTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF
Sbjct: 121 GFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180

Query: 181 GELTEKEIIRAERNSGVVSNKVREIQV 206
           GELTEKEIIRAERNSGVVSNKVREIQ+
Sbjct: 181 GELTEKEIIRAERNSGVVSNKVREIQL 207

[Close]

BLAST of MELO3C014728.2 vs. NCBI nr
Match: XP_022958629.1 (protein MET1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 246.9 bits (629), Expect = 7.0e-62
Identity = 137/204 (67.16%), Postives = 148/204 (72.55%), Query Frame = 0


Query: 14  SSRLLPKICPPNHSSSSSFILCSQSHSHPKL------SHPPFSTSXXXXXXXXXXPFILR 73
           SS+ LPK C       SSF LC    SHPKL       H  F+TS           F++R
Sbjct: 21  SSQPLPKFC-------SSFPLCC---SHPKLFLSNSHFHLSFATSFSSLHSLKPSNFVVR 80

Query: 74  ASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLF 133
           ASD +             PYEEYEVELEQPYGLKF KGRDGGTYIDAIAPGG ADKTGLF
Sbjct: 81  ASDAD--------SVADQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGAADKTGLF 140

Query: 134 TVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEII 193
           TVGD+V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKM+KRYGKTD +GELTEKE+I
Sbjct: 141 TVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGELTEKELI 200

Query: 194 RAERNSGVVSNKVREIQVSECFLL 212
           RAERNSGVVSNKVREIQ+     L
Sbjct: 201 RAERNSGVVSNKVREIQMQNAMRL 206

[Close]

BLAST of MELO3C014728.2 vs. NCBI nr
Match: XP_022996247.1 (protein MET1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 245.0 bits (624), Expect = 2.7e-61
Identity = 135/200 (67.50%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 18  LPKICPPNHSSSSSFILCSQSHSHPKL------SHPPFSTSXXXXXXXXXXPFILRASDT 77
           LPK C       SSF LC    SHPKL       H  F+TS           F++RASD 
Sbjct: 28  LPKFC-------SSFPLCC---SHPKLFLSNSHFHLSFATSFSSLHSLKPSNFVVRASDA 87

Query: 78  EXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGD 137
           +             PYEEYEVELEQPYGLKF KGRDGGTYIDAIAPGG ADKTGLFTVGD
Sbjct: 88  D--------SVADQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGAADKTGLFTVGD 147

Query: 138 RVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAER 197
           +V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKM+KRYGKTD +GELTEKE+IRAER
Sbjct: 148 KVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGELTEKELIRAER 207

Query: 198 NSGVVSNKVREIQVSECFLL 212
           NSGVVSNKVREIQ+     L
Sbjct: 208 NSGVVSNKVREIQMQNAMRL 209

[Close]

BLAST of MELO3C014728.2 vs. NCBI nr
Match: XP_023532558.1 (protein MET1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.6 bits (623), Expect = 3.5e-61
Identity = 135/200 (67.50%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 18  LPKICPPNHSSSSSFILCSQSHSHPKL------SHPPFSTSXXXXXXXXXXPFILRASDT 77
           LPK C       SSF LC    SHPKL       H  F+TS           F++RASD 
Sbjct: 28  LPKFC-------SSFPLCC---SHPKLFLSNSHVHLSFATSFSSFHSLKPSNFVVRASDD 87

Query: 78  EXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGD 137
           +             PYEEYEVELEQPYGLKF KGRDGGTYIDAIAPGG ADKTGLFTVGD
Sbjct: 88  D--------SVADQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGAADKTGLFTVGD 147

Query: 138 RVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAER 197
           +V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKM+KRYGKTD +GELTEKE+IRAER
Sbjct: 148 KVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGELTEKELIRAER 207

Query: 198 NSGVVSNKVREIQVSECFLL 212
           NSGVVSNKVREIQ+     L
Sbjct: 208 NSGVVSNKVREIQMQNAMRL 209

[Close]

BLAST of MELO3C014728.2 vs. TAIR10
Match: AT1G55480.1 (protein containing PDZ domain, a K-box domain, and a TPR region)

HSP 1 Score: 189.1 bits (479), Expect = 3.2e-48
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 96  QPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMY 155
           QPYGLKF KGRDGGTYIDAI PGG ADKTG FTVGDRV+ATSAVFGTEIWPAAEYGRTMY
Sbjct: 95  QPYGLKFRKGRDGGTYIDAILPGGSADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMY 154

Query: 156 TIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQV 206
           TIRQRIGPLLM+M+KR GK +  GELTEKEIIRAERN+G +S+++REIQ+
Sbjct: 155 TIRQRIGPLLMQMEKRNGKAEDTGELTEKEIIRAERNAGYISSRLREIQM 204

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BLAST of MELO3C014728.2 vs. TAIR10
Match: AT5G17170.1 (rubredoxin family protein)

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-08
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 91  EVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEY 150
           EVE+++P GL   + + GG  I  +  GG A K GL + GD+V+ TS+ FG E+WPA + 
Sbjct: 87  EVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS-GDQVVYTSSFFGDELWPADKL 146

Query: 151 GRTMYTIRQR 161
           G T   I+ +
Sbjct: 147 GFTKTAIQAK 155

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BLAST of MELO3C014728.2 vs. TAIR10
Match: AT3G01510.1 (like SEX4 1)

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05
Identity = 24/84 (28.57%), Postives = 43/84 (51.19%), Query Frame = 0


Query: 89  EYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAA 148
           EY V LE+P G++FA   DG  ++ AI  G  A+K  +  VGD +   S   G  +    
Sbjct: 76  EYMVTLEKPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTLKKASDSSGGTLVEIK 135

Query: 149 EYGRTMYTIRQRIGPLLMKMQKRY 173
           ++G T   + ++ G   + +++ +
Sbjct: 136 DFGDTKKMLVEKTGSFSLVLERPF 159

[Close]

BLAST of MELO3C014728.2 vs. Swiss-Prot
Match: sp|Q94BS2|MET1_ARATH (Protein MET1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MET1 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.7e-47
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 96  QPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMY 155
           QPYGLKF KGRDGGTYIDAI PGG ADKTG FTVGDRV+ATSAVFGTEIWPAAEYGRTMY
Sbjct: 95  QPYGLKFRKGRDGGTYIDAILPGGSADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMY 154

Query: 156 TIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQV 206
           TIRQRIGPLLM+M+KR GK +  GELTEKEIIRAERN+G +S+++REIQ+
Sbjct: 155 TIRQRIGPLLMQMEKRNGKAEDTGELTEKEIIRAERNAGYISSRLREIQM 204

[Close]

BLAST of MELO3C014728.2 vs. Swiss-Prot
Match: sp|F4J117|LSF1_ARATH (Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LSF1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-04
Identity = 24/84 (28.57%), Postives = 43/84 (51.19%), Query Frame = 0


Query: 89  EYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAA 148
           EY V LE+P G++FA   DG  ++ AI  G  A+K  +  VGD +   S   G  +    
Sbjct: 76  EYMVTLEKPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTLKKASDSSGGTLVEIK 135

Query: 149 EYGRTMYTIRQRIGPLLMKMQKRY 173
           ++G T   + ++ G   + +++ +
Sbjct: 136 DFGDTKKMLVEKTGSFSLVLERPF 159

[Close]

BLAST of MELO3C014728.2 vs. TrEMBL
Match: tr|A0A1S3BMG9|A0A1S3BMG9_CUCME (uncharacterized protein LOC103491636 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491636 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 3.2e-95
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSXXXXXXXX 60
           MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSXXXXXXXX
Sbjct: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSXXXXXXXX 60

Query: 61  XXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120
           XXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF
Sbjct: 61  XXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120

Query: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180
           ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE
Sbjct: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180

Query: 181 LTEKEIIRAERNSGVVSNKVREIQV 206
           LTEKEIIRAERNSGVVSNKVREIQ+
Sbjct: 181 LTEKEIIRAERNSGVVSNKVREIQL 205

[Close]

BLAST of MELO3C014728.2 vs. TrEMBL
Match: tr|A0A0A0KWR6|A0A0A0KWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268040 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 3.8e-88
Identity = 194/207 (93.72%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSS--SSSFILCSQSHSHPKLSHPPFSTSXXXXXX 60
           MF TMSLAP YLYSS LLPKICPPNHSS     FILCSQSHSHPKLSH PFSTSXXXXXX
Sbjct: 1   MFNTMSLAPPYLYSSHLLPKICPPNHSSXXXXXFILCSQSHSHPKLSHLPFSTSXXXXXX 60

Query: 61  XXXXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120
           XXXXPFILRASDTEXXXXXXXXXXX  PYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  XXXXPFILRASDTEXXXXXXXXXXXQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 121 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180
           GFADKTGLFTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF
Sbjct: 121 GFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180

Query: 181 GELTEKEIIRAERNSGVVSNKVREIQV 206
           GELTEKEIIRAERNSGVVSNKVREIQ+
Sbjct: 181 GELTEKEIIRAERNSGVVSNKVREIQL 207

[Close]

BLAST of MELO3C014728.2 vs. TrEMBL
Match: tr|A0A2C9UGU9|A0A2C9UGU9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G110100 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 133/208 (63.94%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 5   MSLAP---HYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSXXXXXXXXX 64
           MSLAP     LYSS  LP+ C  + ++  S +L SQ +     ++  F TS         
Sbjct: 1   MSLAPASYPSLYSSSPLPRTCCIS-ATKQSPLLFSQINPCLSKNYSFFCTSTSFSNTHFL 60

Query: 65  XP--FILRASDTE--XXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAP 124
            P   I +AS+TE                YEEYEVEL QPYG+KF KGRDGGTYIDAIAP
Sbjct: 61  KPSNLICKASETESKTSKPENESEGGEEAYEEYEVELIQPYGIKFTKGRDGGTYIDAIAP 120

Query: 125 GGFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDS 184
           GG ADKTGLFTVGD+V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTD 
Sbjct: 121 GGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDY 180

Query: 185 FGELTEKEIIRAERNSGVVSNKVREIQV 206
            GELTEKEIIRAERNSGV+SN+VREIQ+
Sbjct: 181 AGELTEKEIIRAERNSGVISNRVREIQM 207

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BLAST of MELO3C014728.2 vs. TrEMBL
Match: tr|A0A118JU51|A0A118JU51_CYNCS (PDZ domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_007080 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.1e-54
Identity = 137/207 (66.18%), Postives = 158/207 (76.33%), Query Frame = 0


Query: 5   MSLAPH---YLYSSRLLPKICPPNHSSSSSFILC---SQSHSHPKLSHPPFSTSXXXXXX 64
           M+ AP+    + +S  LP+    +   + SF+       SH +P+     FS        
Sbjct: 1   MATAPNSYPSICASPPLPRTLNSSTKQTLSFVTSQFKQTSHKNPQTLR--FSIRLGNSNL 60

Query: 65  XXXXPFILRASDTEXXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 124
                 ++RAS+T+XXXXXXXXXXXX  YEEYEVE+EQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  EKQSILVVRASETDXXXXXXXXXXXXR-YEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 125 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 184
           GFADKT +F+VGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK +  
Sbjct: 121 GFADKTKMFSVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKMEDS 180

Query: 185 GELTEKEIIRAERNSGVVSNKVREIQV 206
           GELTEKEIIRAERNSGVVS+KVREIQ+
Sbjct: 181 GELTEKEIIRAERNSGVVSSKVREIQM 204

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BLAST of MELO3C014728.2 vs. TrEMBL
Match: tr|A0A2P5FJR5|A0A2P5FJR5_9ROSA (N-terminal acetyltransferase A, auxiliary subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_061150 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 121/146 (82.88%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 64  FILRASDTE----XXXXXXXXXXXXXPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGG 123
           FI++AS+TE        XXXXXXXXX YEEYEVE+ QPYGL+FAKGRDGGTYIDAIAPGG
Sbjct: 66  FIVKASETEAQTAESGGXXXXXXXXXXYEEYEVEIVQPYGLRFAKGRDGGTYIDAIAPGG 125

Query: 124 FADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFG 183
            ADKTG FTVGD+VLATSAVFG EIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGK D  G
Sbjct: 126 EADKTGKFTVGDKVLATSAVFGEEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKADDGG 185

Query: 184 ELTEKEIIRAERNSGVVSNKVREIQV 206
           ELTEKEIIRAERNSGV+SN+VREIQ+
Sbjct: 186 ELTEKEIIRAERNSGVISNRVREIQM 211

The following BLAST results are available for this feature:

BLAST of MELO3C014728.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449894.1	4.8e-95	99.51	PREDICTED: uncharacterized protein LOC103491636 isoform X1 [Cucumis melo]	[more]
XP_004149641.1	5.7e-88	93.72	PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus] >KGN54020.1 hy...	[more]
XP_022958629.1	7.0e-62	67.16	protein MET1, chloroplastic [Cucurbita moschata]	[more]
XP_022996247.1	2.7e-61	67.50	protein MET1, chloroplastic [Cucurbita maxima]	[more]
XP_023532558.1	3.5e-61	67.50	protein MET1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C014728.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55480.1	3.2e-48	82.73	protein containing PDZ domain, a K-box domain, and a TPR region	[more]
AT5G17170.1	7.1e-08	41.43	rubredoxin family protein	[more]
AT3G01510.1	1.5e-05	28.57	like SEX4 1	[more]

BLAST of MELO3C014728.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94BS2\|MET1_ARATH	5.7e-47	82.73	Protein MET1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MET1 PE=1 SV=1	[more]
sp\|F4J117\|LSF1_ARATH	2.7e-04	28.57	Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MELO3C014728.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BMG9\|A0A1S3BMG9_CUCME	3.2e-95	99.51	uncharacterized protein LOC103491636 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KWR6\|A0A0A0KWR6_CUCSA	3.8e-88	93.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268040 PE=4 SV=1	[more]
tr\|A0A2C9UGU9\|A0A2C9UGU9_MANES	2.2e-56	63.94	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G110100 PE=4 SV=...	[more]
tr\|A0A118JU51\|A0A118JU51_CYNCS	6.1e-54	66.18	PDZ domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Cc...	[more]
tr\|A0A2P5FJR5\|A0A2P5FJR5_9ROSA	1.4e-53	82.88	N-terminal acetyltransferase A, auxiliary subunit OS=Trema orientalis OX=63057 G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036034	PDZ_sf
IPR001478	PDZ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0005983	starch catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014728.2.1	MELO3C014728.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.30.42.10		coord: 69..142 e-value: 2.6E-7 score: 32.2
None	No IPR available	PANTHER	PTHR45171	FAMILY NOT NAMED	coord: 42..207
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 98..137 score: 9.029
IPR036034	PDZ superfamily	SUPERFAMILY	SSF50156	PDZ domain-like	coord: 82..135

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014728.2	CsaV3_4G017550	Cucumber (Chinese Long) v3	cucmedB287

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014728.2	Watermelon (97103) v2	medwmbB368
MELO3C014728.2	Wax gourd	medwgoB485
MELO3C014728.2	Cucumber (Gy14) v2	cgybmedB248
MELO3C014728.2	Cucumber (Gy14) v1	cgymedB255
MELO3C014728.2	Cucurbita maxima (Rimu)	cmamedB598
MELO3C014728.2	Cucurbita maxima (Rimu)	cmamedB654
MELO3C014728.2	Cucurbita moschata (Rifu)	cmomedB585
MELO3C014728.2	Cucurbita moschata (Rifu)	cmomedB642
MELO3C014728.2	Cucurbita pepo (Zucchini)	cpemedB324
MELO3C014728.2	Cucurbita pepo (Zucchini)	cpemedB829
MELO3C014728.2	Wild cucumber (PI 183967)	cpimedB283
MELO3C014728.2	Cucumber (Chinese Long) v2	cumedB279
MELO3C014728.2	Bottle gourd (USVL1VR-Ls)	lsimedB074
MELO3C014728.2	Watermelon (Charleston Gray)	medwcgB370
MELO3C014728.2	Watermelon (97103) v1	medwmB408
MELO3C014728.2	Silver-seed gourd	carmedB0518