MELO3C014609.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C014609.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionAP2-like ethylene-responsive transcription factor PLT1
Locationchr05 : 962515 .. 963742 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTTGTTGATCAACTACGTAAGTGTGATATGGGAGTATAAATGTACGTAGTTATGATTGATGGATGATATGATATGGGGTTGTAGGTACAGAAGAGGAAGCAGCAGAAGCATACGACATAGCGGCTATAAAATTCAGAGGGCTAAATGCAGTAACAAACTTCGATATGAGTCGTTACGATGTGAAAAGCATATTAGAGAGCAACACACTCCCAATTGGTGGTGGTGCTGCAAAGCGACTAAAGGAAGCTCAAGCCGTGGAATCGTCTCGAAAGCGAGACGAAATGATTGCATTAGGTTCCTCTTCGTCCTCCTCTTCTTGCTTCCAATATGGAACTTCTTCCTCTTCCACAACTAACTCTTCCCATTACCCTAATTTACTCCAACAACCAAATCTCAATATAGACCATCACCATCTTCAAACCCAACCTTTGCTCTCTCTTCAAAACCACCACGACATTTCTCATTACGCTCACCATCCTTCCTCGTTCCACAACCCTTCTTCTTCTTACATCCACCATTCATCTGATCATTCCTCTTACCCTAACAACAACAACAACAATCATCCATTTTACGGTGCCGGGTATCTTCATAATCATCCCGCTTTGCTTCACGGGATGATTAACATGAGCGGCGGAGGTGGTGGCGGAGGAGGAGGAGGAGCTTCTAGTTTGGACAATAACAACAATACTAATGCATTGAGTCATTATGAGAGTAATAGTAATGGAGGGGGAGGGTATCTTGGGAATGCATTTGGGATTGGTTCTGCATCCGGCAGTGCAGCGGAGGAATATGCCCTCGTTAAGGTTGACTATGACATGCCTAATTCCGGTGGGTACGGCGGTTGGACCGGGGATTCTGTCCAAGGTTCTAACGCTGGGGTTTTCTCCATGTGGAATGATTGATACATGTGATTCAAAAGTTAACTAATTATGGGGAAATTTGATGGGTTTTTTTTTCTCTTTCTTTCTTTCTTTTTTGGTTGGATTAGGAATGTGGGATTTGCCATTTGGGATTTGATTTTGGAAATGTAAACTTGGATTAGGGTGAAGTTTAATGGAGAAGAACATAAACACAGCAACAACGGCAACTAACGACGGAGAATATTTGTGAATCAAAGAACAAAGTGTTGTTTGTAATGACTGTAACCATCGCTCCCATATATTATATTATTTTAACCTTTCTTTTTTATTATTCTTTTGTTCTTTTTAATTTTCATCTCTCC

mRNA sequence

ATGAGTGTTGTTGATCAACTACGTACAGAAGAGGAAGCAGCAGAAGCATACGACATAGCGGCTATAAAATTCAGAGGGCTAAATGCAGTAACAAACTTCGATATGAGTCGTTACGATGTGAAAAGCATATTAGAGAGCAACACACTCCCAATTGGTGGTGGTGCTGCAAAGCGACTAAAGGAAGCTCAAGCCGTGGAATCGTCTCGAAAGCGAGACGAAATGATTGCATTAGGTTCCTCTTCGTCCTCCTCTTCTTGCTTCCAATATGGAACTTCTTCCTCTTCCACAACTAACTCTTCCCATTACCCTAATTTACTCCAACAACCAAATCTCAATATAGACCATCACCATCTTCAAACCCAACCTTTGCTCTCTCTTCAAAACCACCACGACATTTCTCATTACGCTCACCATCCTTCCTCGTTCCACAACCCTTCTTCTTCTTACATCCACCATTCATCTGATCATTCCTCTTACCCTAACAACAACAACAACAATCATCCATTTTACGGTGCCGGGTATCTTCATAATCATCCCGCTTTGCTTCACGGGATGATTAACATGAGCGGCGGAGGTGGTGGCGGAGGAGGAGGAGGAGCTTCTAGTTTGGACAATAACAACAATACTAATGCATTGAGTCATTATGAGAGTAATAGTAATGGAGGGGGAGGGTATCTTGGGAATGCATTTGGGATTGGTTCTGCATCCGGCAGTGCAGCGGAGGAATATGCCCTCGTTAAGGTTGACTATGACATGCCTAATTCCGGTGGGTACGGCGGTTGGACCGGGGATTCTGTCCAAGGTTCTAACGCTGGGGTTTTCTCCATGTGGAATGATTGATACATGTGATTCAAAAGTTAACTAATTATGGGGAAATTTGATGGGTTTTTTTTTCTCTTTCTTTCTTTCTTTTTTGGTTGGATTAGGAATGTGGGATTTGCCATTTGGGATTTGATTTTGGAAATGTAAACTTGGATTAGGGTGAAGTTTAATGGAGAAGAACATAAACACAGCAACAACGGCAACTAACGACGGAGAATATTTGTGAATCAAAGAACAAAGTGTTGTTTGTAATGACTGTAACCATCGCTCCCATATATTATATTATTTTAACCTTTCTTTTTTATTATTCTTTTGTTCTTTTTAATTTTCATCTCTCC

Coding sequence (CDS)

ATGAGTGTTGTTGATCAACTACGTACAGAAGAGGAAGCAGCAGAAGCATACGACATAGCGGCTATAAAATTCAGAGGGCTAAATGCAGTAACAAACTTCGATATGAGTCGTTACGATGTGAAAAGCATATTAGAGAGCAACACACTCCCAATTGGTGGTGGTGCTGCAAAGCGACTAAAGGAAGCTCAAGCCGTGGAATCGTCTCGAAAGCGAGACGAAATGATTGCATTAGGTTCCTCTTCGTCCTCCTCTTCTTGCTTCCAATATGGAACTTCTTCCTCTTCCACAACTAACTCTTCCCATTACCCTAATTTACTCCAACAACCAAATCTCAATATAGACCATCACCATCTTCAAACCCAACCTTTGCTCTCTCTTCAAAACCACCACGACATTTCTCATTACGCTCACCATCCTTCCTCGTTCCACAACCCTTCTTCTTCTTACATCCACCATTCATCTGATCATTCCTCTTACCCTAACAACAACAACAACAATCATCCATTTTACGGTGCCGGGTATCTTCATAATCATCCCGCTTTGCTTCACGGGATGATTAACATGAGCGGCGGAGGTGGTGGCGGAGGAGGAGGAGGAGCTTCTAGTTTGGACAATAACAACAATACTAATGCATTGAGTCATTATGAGAGTAATAGTAATGGAGGGGGAGGGTATCTTGGGAATGCATTTGGGATTGGTTCTGCATCCGGCAGTGCAGCGGAGGAATATGCCCTCGTTAAGGTTGACTATGACATGCCTAATTCCGGTGGGTACGGCGGTTGGACCGGGGATTCTGTCCAAGGTTCTAACGCTGGGGTTTTCTCCATGTGGAATGATTGA

Protein sequence

MSVVDQLRTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAVESSRKRDEMIALGSSSSSSSCFQYGTSSSSTTNSSHYPNLLQQPNLNIDHHHLQTQPLLSLQNHHDISHYAHHPSSFHNPSSSYIHHSSDHSSYPNNNNNNHPFYGAGYLHNHPALLHGMINMSGGGGGGGGGGASSLDNNNNTNALSHYESNSNGGGGYLGNAFGIGSASGSAAEEYALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND
Homology
[Close]
BLAST of MELO3C014609.2 vs. NCBI nr
Match: XP_011653587.1 (PREDICTED: AP2-like ethylene-responsive transcription factor PLT2 [Cucumis sativus] >KGN54165.1 hypothetical protein Csa_4G290800 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 7.9e-33
Identity = 249/277 (89.89%), Postives = 249/277 (89.89%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA---- 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 339 TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAXXXX 398

Query: 69  --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 399 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 458

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    
Sbjct: 459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGAGYLHNHPALLHGMINM 518

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGIGSASGSAAEE 248
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LGNAFGIGSASGS AEE
Sbjct: 519 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNAFGIGSASGSTAEE 578

Query: 249 YALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 280
           YALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND
Sbjct: 579 YALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 615

[Close]
BLAST of MELO3C014609.2 vs. NCBI nr
Match: XP_023513294.1 (AP2-like ethylene-responsive transcription factor PLT2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.0 bits (336), Expect = 7.7e-28
Identity = 227/277 (81.95%), Postives = 231/277 (83.39%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAXXXX 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 306 TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA---- 365

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 366 ----IESSRKRDEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 425

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           XXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 426 XXXXXXXXXXXXXXXXXXXXXXXSQYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 485

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGIGSAS-----GSAAEEY 248
           XXXXXXXXXXXXXXXXX              XXXXXYLGNAFG+GS S     G+ AEEY
Sbjct: 486 XXXXXXXXXXXXXXXXXHNHPGLLHGMITNNXXXXXYLGNAFGMGSTSATANNGAPAEEY 545

Query: 249 ALVKVDYDM-PNSGGYGGWTGDSVQGSNAGVFSMWND 280
           ALVKVDYDM PN+GGYG W+GDSVQGSN GVFSMWND
Sbjct: 546 ALVKVDYDMPPNAGGYGSWSGDSVQGSNPGVFSMWND 574

[Close]
BLAST of MELO3C014609.2 vs. NCBI nr
Match: XP_022985835.1 (AP2-like ethylene-responsive transcription factor PLT2 [Cucurbita maxima])

HSP 1 Score: 127.9 bits (320), Expect = 5.5e-26
Identity = 263/293 (89.76%), Postives = 267/293 (91.13%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA---- 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 316 TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAIESS 375

Query: 69  ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 376 RKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 435

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 436 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 495

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGI 248
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFG+
Sbjct: 496 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGM 555

Query: 249 GSAS-----GSAAEEYALVKVDYDM-PNSGGYGGWTGDSVQGSNAGVFSMWND 280
           GS S     G+ AEEYALVKVDYDM PN+GGYG W+GDSVQGSN GVFSMWND
Sbjct: 556 GSTSATANNGAPAEEYALVKVDYDMPPNAGGYGSWSGDSVQGSNPGVFSMWND 608

[Close]
BLAST of MELO3C014609.2 vs. NCBI nr
Match: XP_022944693.1 (AP2-like ethylene-responsive transcription factor PLT2 [Cucurbita moschata])

HSP 1 Score: 127.1 bits (318), Expect = 9.4e-26
Identity = 263/295 (89.15%), Postives = 267/295 (90.51%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA---- 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 316 TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAIESS 375

Query: 69  --------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 376 RKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 435

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 436 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 495

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAF 248
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAF
Sbjct: 496 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAF 555

Query: 249 GIGSAS-----GSAAEEYALVKVDYDM-PNSGGYGGWTGDSVQGSNAGVFSMWND 280
           G+GS S     G+ AEEYALVKVDYDM PN+GGYG W+GDSVQGSN GVFSMWND
Sbjct: 556 GMGSTSATANNGAPAEEYALVKVDYDMPPNAGGYGSWSGDSVQGSNPGVFSMWND 610

[Close]
BLAST of MELO3C014609.2 vs. NCBI nr
Match: XP_021278972.1 (AP2-like ethylene-responsive transcription factor PLT2 [Herrania umbratica])

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-24
Identity = 101/278 (36.33%), Postives = 103/278 (37.05%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAXXXX 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVK+ILESNTLPIGGGAAKRLKEAQ     
Sbjct: 303 TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQT---- 362

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
                                                                       
Sbjct: 363 -----------------------------LESSRKREEMIALGSSFQYGSSSSSRLQAYP 422

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                                                                       
Sbjct: 423 LMQTPFEQPQPLLTLQNQDMSPYAQDTSSFHQNYIQTQLQLHQQSGSYLHQPSQNSQFYN 482

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGIGSASGSAA-------E 248
                                               YLGN  GIG AS S A       E
Sbjct: 483 NHIQNNPALFHGLMGMCCSSSVVDNNGSSNGSYSAGYLGN--GIGMASNSTAGNAVGSTE 542

Query: 249 EYALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 280
           E ALVKVDYDMP SGGYGGW+GDSVQGSNAGVFSMWND
Sbjct: 543 ELALVKVDYDMP-SGGYGGWSGDSVQGSNAGVFSMWND 544

[Close]
BLAST of MELO3C014609.2 vs. TAIR10
Match: AT1G51190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 5.3e-23
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA 65
           TEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVK+ILESNTLPIGGGAAKRLKEAQA
Sbjct: 325 TEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQA 380

[Close]
BLAST of MELO3C014609.2 vs. TAIR10
Match: AT3G20840.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-22
Identity = 51/56 (91.07%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA 65
           TEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVK+ILES+TLPIGGGAAKRLKEAQA
Sbjct: 316 TEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQA 371

[Close]
BLAST of MELO3C014609.2 vs. TAIR10
Match: AT5G17430.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-16
Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKE 62
           T+EEAAEAYDIAAIKFRGL+AVTNFDM+RY+VK+ILES +LPI G +AKRLK+
Sbjct: 345 TQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPI-GSSAKRLKD 396

[Close]
BLAST of MELO3C014609.2 vs. TAIR10
Match: AT5G65510.1 (AINTEGUMENTA-like 7)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 38/52 (73.08%), Postives = 48/52 (92.31%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLK 61
           TEEEAAEAYDIAAIKFRG+NAVTNF+M+RYD+++++ S +LP+GG AAKR K
Sbjct: 366 TEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNS-SLPVGGAAAKRHK 416

[Close]
BLAST of MELO3C014609.2 vs. TAIR10
Match: AT5G10510.3 (AINTEGUMENTA-like 6)

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-15
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLK 61
           TEEEAAEAYDIAAIKFRG+NAVTNF+M+RYDV++I++S  LPI GGAAKRLK
Sbjct: 423 TEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVEAIMKS-ALPI-GGAAKRLK 472

[Close]
BLAST of MELO3C014609.2 vs. Swiss-Prot
Match: sp|Q5YGP7|PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.5e-22
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA 65
           TEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVK+ILESNTLPIGGGAAKRLKEAQA
Sbjct: 325 TEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQA 380

[Close]
BLAST of MELO3C014609.2 vs. Swiss-Prot
Match: sp|Q5YGP8|PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.6e-21
Identity = 51/56 (91.07%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA 65
           TEEEAAEAYDIAAIKFRGLNAVTNF+++RYDVK+ILES+TLPIGGGAAKRLKEAQA
Sbjct: 316 TEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQA 371

[Close]
BLAST of MELO3C014609.2 vs. Swiss-Prot
Match: sp|Q8L3U3|BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus OX=3708 GN=BBM1 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.8e-16
Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEA 63
           T+EEAAEAYDIAAIKFRGL AVTNFDM+RY+VK+ILES +LPI G AAKRLKEA
Sbjct: 345 TQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI-GSAAKRLKEA 397

[Close]
BLAST of MELO3C014609.2 vs. Swiss-Prot
Match: sp|Q8LSN2|BBM2_BRANA (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708 GN=BBM2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.8e-16
Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEA 63
           T+EEAAEAYDIAAIKFRGL AVTNFDM+RY+VK+ILES +LPI G AAKRLKEA
Sbjct: 345 TQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI-GSAAKRLKEA 397

[Close]
BLAST of MELO3C014609.2 vs. Swiss-Prot
Match: sp|Q6PQQ4|BBM_ARATH (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX=3702 GN=BBM PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-15
Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKE 62
           T+EEAAEAYDIAAIKFRGL+AVTNFDM+RY+VK+ILES +LPI G +AKRLK+
Sbjct: 345 TQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPI-GSSAKRLKD 396

[Close]
BLAST of MELO3C014609.2 vs. TrEMBL
Match: tr|A0A0A0KX09|A0A0A0KX09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290800 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.2e-33
Identity = 249/277 (89.89%), Postives = 249/277 (89.89%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA---- 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 339 TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAXXXX 398

Query: 69  --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 399 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 458

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    
Sbjct: 459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGAGYLHNHPALLHGMINM 518

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGIGSASGSAAEE 248
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LGNAFGIGSASGS AEE
Sbjct: 519 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNAFGIGSASGSTAEE 578

Query: 249 YALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 280
           YALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND
Sbjct: 579 YALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 615

[Close]
BLAST of MELO3C014609.2 vs. TrEMBL
Match: tr|A0A1S3BN60|A0A1S3BN60_CUCME (AP2-like ethylene-responsive transcription factor PLT1 OS=Cucumis melo OX=3656 GN=LOC103491672 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 8.4e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 225 YLGNAFGIGSASGSAAEEYALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 280
           YLGNAFGIGSASGSAAEEYALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND
Sbjct: 191 YLGNAFGIGSASGSAAEEYALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 245

[Close]
BLAST of MELO3C014609.2 vs. TrEMBL
Match: tr|A0A2K2BA87|A0A2K2BA87_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G205700v3 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 94/276 (34.06%), Postives = 102/276 (36.96%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAXXXX 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDM+RYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 299 TEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQA---- 358

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
                                                                       
Sbjct: 359 ---------------------------------------------IESSRKREEMIALGS 418

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                                                                       
Sbjct: 419 SFPYGSTSSSSRLQAYPLMQTPFEQPQPLLTLQNQDISQYTQDSSSFHQNFLQTQLHLHQ 478

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGI-----GSASGSAAEEY 248
                                               YLGN  G+     GS +  +AEE 
Sbjct: 479 QSTGSNFLHNQSNQNPQYYNSYIQNNPALLHGFTGGYLGNGLGMASNSTGSNAVGSAEEL 524

Query: 249 ALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND 280
           ALVKVDYDMP+S GYG W+GDSVQGSN GVF+MWN+
Sbjct: 539 ALVKVDYDMPSS-GYGSWSGDSVQGSNPGVFTMWNE 524

[Close]
BLAST of MELO3C014609.2 vs. TrEMBL
Match: tr|A0A2G3B962|A0A2G3B962_CAPCH (AP2-like ethylene-responsive transcription factor PLT1 OS=Capsicum chinense OX=80379 GN=BC332_28289 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.2e-22
Identity = 119/281 (42.35%), Postives = 125/281 (44.48%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAXXXX 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDM+RYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 59  TEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQA---- 118

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
                                                                       
Sbjct: 119 ----------------------------------------------LESSRKRDQEMMAL 178

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                                                            XXXXXXXXXXX
Sbjct: 179 NSSFQYGNSTALQAYPLMQQQPFDSQPLLTLQNHDISQYNIQESSSHFHXXXXXXXXXXX 238

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGIGSAS---------GSA 248
           XXXXXXXXXXXXX                       Y GN+ G+G  S         G+A
Sbjct: 239 XXXXXXXXXXXXXNPVFLHGLMNSEGSSSGSYSTGGYFGNSSGLGGISSHSISDNGGGNA 289

Query: 249 AEEYALVKVDYD-MPNSGGYGGWTGDSVQGSNAGVFSMWND 280
            EE ALVKVDYD MP SG Y GW+G+SVQGSN GVFSMWND
Sbjct: 299 HEEVALVKVDYDNMPVSGSYNGWSGESVQGSNTGVFSMWND 289

[Close]
BLAST of MELO3C014609.2 vs. TrEMBL
Match: tr|A0A1U8FE25|A0A1U8FE25_CAPAN (AP2-like ethylene-responsive transcription factor PLT1 OS=Capsicum annuum OX=4072 GN=LOC107857055 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.2e-22
Identity = 119/281 (42.35%), Postives = 125/281 (44.48%), Query Frame = 0 

Query: 9   TEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAXXXX 68
           TEEEAAEAYDIAAIKFRGLNAVTNFDM+RYDVKSILESNTLPIGGGAAKRLKEAQA    
Sbjct: 6   TEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQA---- 65

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
                                                                       
Sbjct: 66  ----------------------------------------------LESSRKRDQEMMAL 125

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                                                            XXXXXXXXXXX
Sbjct: 126 NSSFQYGNSTALQAYPLMQQQPFDSQPLLTLQNHDISQYNIQESSSHFHXXXXXXXXXXX 185

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGNAFGIGSAS---------GSA 248
           XXXXXXXXXXXXX                       Y GN+ G+G  S         G+A
Sbjct: 186 XXXXXXXXXXXXXNPVFLHGLMNSEGSSSGSYSTGGYFGNSSGLGGISSHSISDNGGGNA 236

Query: 249 AEEYALVKVDYD-MPNSGGYGGWTGDSVQGSNAGVFSMWND 280
            EE ALVKVDYD MP SG Y GW+G+SVQGSN GVFSMWND
Sbjct: 246 HEEVALVKVDYDNMPVSGSYNGWSGESVQGSNTGVFSMWND 236

The following BLAST results are available for this feature:
BLAST of MELO3C014609.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653587.17.9e-3389.89PREDICTED: AP2-like ethylene-responsive transcription factor PLT2 [Cucumis sativ... [more]
XP_023513294.17.7e-2881.95AP2-like ethylene-responsive transcription factor PLT2 [Cucurbita pepo subsp. pe... [more]
XP_022985835.15.5e-2689.76AP2-like ethylene-responsive transcription factor PLT2 [Cucurbita maxima][more]
XP_022944693.19.4e-2689.15AP2-like ethylene-responsive transcription factor PLT2 [Cucurbita moschata][more]
XP_021278972.13.0e-2436.33AP2-like ethylene-responsive transcription factor PLT2 [Herrania umbratica][more]
BLAST of MELO3C014609.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G51190.15.3e-2392.86Integrase-type DNA-binding superfamily protein[more]
AT3G20840.12.0e-2291.07Integrase-type DNA-binding superfamily protein[more]
AT5G17430.14.8e-1679.25Integrase-type DNA-binding superfamily protein[more]
AT5G65510.11.8e-1573.08AINTEGUMENTA-like 7[more]
AT5G10510.33.1e-1580.77AINTEGUMENTA-like 6[more]
BLAST of MELO3C014609.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q5YGP7|PLET2_ARATH9.5e-2292.86AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana O... [more]
sp|Q5YGP8|PLET1_ARATH3.6e-2191.07AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana O... [more]
sp|Q8L3U3|BBM1_BRANA7.8e-1683.33AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus OX=3708... [more]
sp|Q8LSN2|BBM2_BRANA7.8e-1683.33AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708... [more]
sp|Q6PQQ4|BBM_ARATH8.6e-1579.25AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX... [more]
BLAST of MELO3C014609.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KX09|A0A0A0KX09_CUCSA5.2e-3389.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290800 PE=4 SV=1[more]
tr|A0A1S3BN60|A0A1S3BN60_CUCME8.4e-23100.00AP2-like ethylene-responsive transcription factor PLT1 OS=Cucumis melo OX=3656 G... [more]
tr|A0A2K2BA87|A0A2K2BA87_POPTR1.9e-2234.06Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G205700v3 PE=... [more]
tr|A0A2G3B962|A0A2G3B962_CAPCH3.2e-2242.35AP2-like ethylene-responsive transcription factor PLT1 OS=Capsicum chinense OX=8... [more]
tr|A0A1U8FE25|A0A1U8FE25_CAPAN3.2e-2242.35AP2-like ethylene-responsive transcription factor PLT1 OS=Capsicum annuum OX=407... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048856 anatomical structure development
biological_process GO:0044763 single-organism cellular process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014609.2.1MELO3C014609.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 3..40
e-value: 0.0063
score: 10.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 1..34
score: 9.15
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 6..36
e-value: 1.1E-6
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..164
NoneNo IPR availablePANTHERPTHR32467:SF22AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT1-RELATEDcoord: 7..279
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 7..279
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 9..36

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C014609.2Csa4G290800Cucumber (Chinese Long) v2cumedB279
MELO3C014609.2CSPI04G13770Wild cucumber (PI 183967)cpimedB283
MELO3C014609.2Cucsa.065430Cucumber (Gy14) v1cgymedB062
MELO3C014609.2CsGy4G013370Cucumber (Gy14) v2cgybmedB247
MELO3C014609.2Cla97C02G049470Watermelon (97103) v2medwmbB368
MELO3C014609.2Bhi10G000255Wax gourdmedwgoB485
MELO3C014609.2Carg06913Silver-seed gourdcarmedB0533
MELO3C014609.2CsaV3_4G024120Cucumber (Chinese Long) v3cucmedB286
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C014609.2Silver-seed gourdcarmedB0478
MELO3C014609.2Silver-seed gourdcarmedB0917
MELO3C014609.2Cucumber (Chinese Long) v3cucmedB070
MELO3C014609.2Cucumber (Chinese Long) v3cucmedB563
MELO3C014609.2Watermelon (97103) v2medwmbB371
MELO3C014609.2Watermelon (97103) v2medwmbB404
MELO3C014609.2Wax gourdmedwgoB488
MELO3C014609.2Cucumber (Gy14) v2cgybmedB060
MELO3C014609.2Cucumber (Gy14) v2cgybmedB490
MELO3C014609.2Cucurbita maxima (Rimu)cmamedB082
MELO3C014609.2Cucurbita maxima (Rimu)cmamedB392
MELO3C014609.2Cucurbita maxima (Rimu)cmamedB598
MELO3C014609.2Cucurbita maxima (Rimu)cmamedB654
MELO3C014609.2Cucurbita moschata (Rifu)cmomedB076
MELO3C014609.2Cucurbita moschata (Rifu)cmomedB380
MELO3C014609.2Cucurbita moschata (Rifu)cmomedB585
MELO3C014609.2Cucurbita moschata (Rifu)cmomedB642
MELO3C014609.2Cucurbita moschata (Rifu)cmomedB939
MELO3C014609.2Cucurbita pepo (Zucchini)cpemedB165
MELO3C014609.2Cucurbita pepo (Zucchini)cpemedB400
MELO3C014609.2Cucurbita pepo (Zucchini)cpemedB324
MELO3C014609.2Cucurbita pepo (Zucchini)cpemedB366
MELO3C014609.2Cucurbita pepo (Zucchini)cpemedB829
MELO3C014609.2Wild cucumber (PI 183967)cpimedB064
MELO3C014609.2Wild cucumber (PI 183967)cpimedB550
MELO3C014609.2Melon (DHL92) v3.6.1medmedB090
MELO3C014609.2Bottle gourd (USVL1VR-Ls)lsimedB074
MELO3C014609.2Bottle gourd (USVL1VR-Ls)lsimedB230
MELO3C014609.2Bottle gourd (USVL1VR-Ls)lsimedB439
MELO3C014609.2Watermelon (Charleston Gray)medwcgB373
MELO3C014609.2Watermelon (Charleston Gray)medwcgB370
MELO3C014609.2Watermelon (97103) v1medwmB396
MELO3C014609.2Watermelon (97103) v1medwmB389
MELO3C014609.2Watermelon (97103) v1medwmB408