MELO3C014529 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014529
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Replication factor C subunit 1
Location	chr5 : 1612187 .. 1618182 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAAGATTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGGTAAGCACTTCGTATATGACTTTGAGTATGGTTGCTCATTTATTAGAGTGGGTTGTATGCATGCTTGGTTATAGCAGCTTGATTCTTGATATACACTGGTTTCAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCTATGTCAGTTATTAAATATGATGATATTCGGCAACGGCTTCTGAGCAGTAGGAAAGATGAAGACATCTCACCCTTCACTGCTGTTGATAAGTATGCACGAGTTAATCTTAATTCTTAACTTTTCTATCTGGCCAAGCCTTTCTGGCTGCTGTATTTGTCCTGTCAAGTTCATGGAAAACTGTGGTGGAGCAATAATATATAATACTTGCTGTGTTTCCAATTTAAGCTGGTTGGTGTCGTCCCATTTTCTTATTTAGCATTTTTGCATGCTTTTTTTCAATTTTCATATTCTTCTGAGACCTGTTTGACGCCCCTGTAGCAAATTCTTTTTTAATGTCCCTTTACCCATGATTATTTTGGGTTGGAAGGCTGCTTGTATGCTCTCTTCTAACTGCCCTAAGGTTGTTTTGCCTCCATTTTTAGTATATTTATTGGTTTCTTATAAAAAAGAAAGTAATGTTAATAATAATAAAAGGTACATTTCTCGTGATATACCAACAATATATATGTATTATTGATTATGAATTGTAGACTAATACTATCCATCCTATTTGCTATATATGTATGCATGTATGTAGTATGTATGCTGTTGTTTATGAATCGTAATTTTTAAATTTATGGTTTCTATTTTTTAATGACTTATAATACTATATAGATAATTTGACATGTTCGAACAATTTTAACAAACTTGGTAATTTGATATGAAATATTTTTGTTTGTTTGAAGGTTTTAAGAATATTCTCCGTAAATGAGGATTCCTGGGGGAATTAATCATTTAACTGAATTATCTTTTTTAAAAAATCCACTTTTTGAGTTTAAAAAAATGGAGAATTATTCTCTGTGGAGAATCTGCTCTTTTGTGATTTTCTCTGTGGGGAGTCATCACCCTGATGGGGAATCAAATGGGAGAGGCAATGGGTACTGGGAAGCCATCTCCAACCCCGCCTTGCCAATGAACATACTTTTTGTAGGTGTATTTTGGAATTCCAATTCTGCCCTTTTAGTTGAAAAGTATCTATTAGTTTCTTGGAAGCCTTTGAATGTTTCATCGTTGCAAAGAAACATAGTTGCTTATGAAAATAATTAAAAACGATGAATCCTCTTGGATGTTAGAATTTCAGGTGCTCATGGATTTCAGTTTTTGGCTGCATGTATTTATCGTGGTCTTTGCACTTGTAGGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATTGATCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGTATCTTACTTTGGTTTAATAGATGCTTGATGCTTGTATCAACTGTCTACCTGTACTAAACCAAACTGTTAAATAATACTTTAGGAGGGACATTTTCAAATATAACAAAATGAACCAAAATATTTACAAAATATAGCAAAATTTTAGATCTATCGTTGATAGACACTGTGTGATAGAATCTGAAATTTTGTCATATTTTAGACATATTTTCAATAGTTGTGCCATTTACAATAATTCCCCTACTTTAGATGTAGAATAACTTTATTTTTAGGATAAATTTGTGTACTTTTTAATGTTTGACTGTAGTTGGTATTTCACTTACGGCTAGTTAAAGAAACTTATTTTATGGGGCCTTCTTTTTGGTCTTTACTTCTAGTCCTCCCACGTTTGTTTTATTCCATCTTGTTAATGAATATCCTGTGGCCTTAACTGGAGGAATCTGAGCATTATAATTGGTTGCAGGAAAATTATATTAATTATAGGCCAAGTGGTGTTAGCAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCCCGTGCAGCTGAATCAATTGCAGATGGTGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTTTCTCAAAGTAGTTGTATTGCTTCTTGTATAATCCCGTAAGTTTCATGGTGTCACCTAAGCAGCTAATGCTTTTCTTTACTAAAGCTACCATTCATTATTGATCTTTGTATAATTCTTTCTGTAACAGAGCTTCGTTATTGCATGGGCAAAGAGAAACGCTTGAGCAGGTGATGAAATTCTGTACATGCAAGTTGTAAGGTTTTGAAATCTTGTTTAGTTCTTTTTATTGATTTATGAGTTAAGAAACTTAGTGATTTGATAATGCTTTGGAGGTACGAGGAAATAGCTATTGTCAGTGAACTGGTAGAATTTGAGTGGTAAAATTTTTCTTCTAATTTCTGTTTATAGTATCCGTATGAGTGGACCATCAAACCTGATGTATTTGATATCATTACAATCTTGCACCTGTGAGTAAAAATACTATATTTTGGATAACGTGGGAGAATTTAATATTATACTTTCAAGGAACGTGTGCGGTTTGCCATAGTGGCATTTCAGTAATACTGAGCTTGTGCATCATTCATGCAGTTTGAGCGTAATTTTAATAGATTTGGTGCATGGCTGGGAAAGAATTCCACATTTGGAAAAAATATGAGACTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAATCCTGTTCAGGGAGGTAATTTGTTGTTTGCTGTATTTGTTCTTTCGACTGTGGTAGCATATTATATGTCCTGTATGCATATTTCCCCACCTGGAAGCGTTAGATACCTTCTCAATTAAATATCTTTCAATTATATGTTCTTCTTATAAAGGATGAGAATCATTTCATTGATAATGAAGTCATAGAAAATGAAGGAATGTGTTGGTTAAAGAAGATTGTCTCTAATTACCATCTGGCCATACTTTCAAGAGATGGCAAAGAAGCTGTGGACTAACATGATTAAATTTATCCTTCGAATCTTATAGTCGGTAACAAATTGTGGTGAATGGTAAGGCAAGAGATTTCCAGAAAATGTCTGTCTACCAAAATTTTGTTGTTCAAATTGGGACTATTTACATAATATGTTTTGCAACTATACATGCATGGGTGTTTTGATTTTACTTATCACCTTATCAATGAACATTTTCTCACAATCTCTTTTGTAATTACACCATTCGCACGATCAAACCTAGATCGGACATCTTGTTTCCTCGCCCTTTTGGCTGTTCTCTTGTTTTTGGGTGAAAATTGAAAAGAATTCCTTTGATGTATTTGTCCAAGATAATAATAATAATAGTGAACGTTTTTTCTTAAAAAAATTGAAAAAGAATAAGAAAGCCAACATGCGGTTCTTATCACTCTATTGTGAAAAGAGATCTCTTAAAATTTCATATGGGCCATTGGGGAACTCTTCCAGAGGGATTTATCTTCGGTTAAACTCCTGACATTCAAGCTGAATGAAGAGTGTCTTGTAATTACACTCTTAGGAATTTTCCTTCCATTTTCTTACTAATGGTTTCCTTCTGTTTTTAATTTTAAAAAATTCTGCATTTCCATTAGCTTAATAGTTAACCTAAACTTCTCCATTGATAGACTAGGATATGTAATGGTCAGATAGAAGTTCCTAGATTTTTAATGTTTCCAGATTCTGGTATCATCCTAATGCTCAGGAGAAAAGCTTTCAATTCAGGCAAAGGAGAGAAGCCCACCACTAAATCCCCCTATCACTATAAGTTATAAAATATGGGTTTTCCTTCCTCTTTAAGATTATTCCCAAATATGTCGCTTCTTGCATGGTCTTAAATCTAAGCTGATCTGCGATCATAACTTTGGAAACTTGTTAAAATTGTCTGGAATACACTTGTAAGCTTTTTAACCCCACTCTTTTCACATCCTTGGGCCTTTTTGCTATATGCTCTTTGTATAACTCTCTTGTACTTTGAGCTTTAATCTCATATCATTTTACTAATAAAGAGGCTTGTTTCCATTTTTTTTAAAACCCATTCTTTTCACATGGATATGTGTGCCATTAGTTGCAAGCTATAACACTTGTATACGAAATAATACAGGGAACACCTACGAGTTGAGAACCTTACTCTGTTTCTAAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGTTAGAATATATTTTGCTTGTCTGATTTTAGTATGGGAATGGTAATTCTTCGAGGCACTCACCATGGTGTACTTAATGATTTTTCAAAATGATATGATCACCAGGATGAGGCTGTTAAAACAGTGGTTGAATTTATGAGCCTATACTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGTATTGACATCTCATTCTGTTTAGTGATATCATGCCTTCTATTCTGGCCATACTTTTTTTAGTGTAATTTTCTTACGGACGATTCTCCAAAACAGGGTCGTAAGAATCCACTAGATGGAGTTGCCCCCGCAGTCAAAGCTGCTCTAACCAAGGCATACAAAGAAGCAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTCCTGGAATGAAAAAAGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCTACTGAGGATACTGTTGAAGGTGCTGGGGGAGAGACATTGGTGGAAAGTGATGATGAAAACTCTGTGGACAATGAGGGCGAAGGTAAGATTTGGTTCGCTTTTTCTAAACCAACTGTTAGCAAATGAGTTGTGCTTGTTGGGAAAGTCAGTTTGTGAGAGCCCTAATTTGAGATATATTAATATTATTGGTGGGATAATAATAAGAGTCATTAACCATGAGTGTCTTGGTTATAAATATAGTGTGTTGGGGTCCCTAGAGGGTGTGAGCCATTTTGGTAGAAATTTTCACGTGAAAATTTTAGGAGGGAGTCCTCTCGAAAAGCTATTATATCATAATTTCTTTTGCCGATTTTGCGATATAGTTTTATCTTGGTTTTCTTCGTGCTCCTTTAAGTTCTTTTTTGTTAGGAGTATCCTTAACAGATACCTTCTTGTTTGCAATTATAGAAAACTCCACAAATGGTGAGAAGCTGCAATTAGAACTTCAAAGCTTGAACAAGAAAGGTAGCTGATCTTTCTCCTTTGCTTCTAATTTGTTTAAAACGTGTAGTCTTTCTTTCAAATGTACTTCATATTTTTTGTATTTTGTTAGGAATGCAAGTGCAATTGGATTTGAAGGGTGTGGAAGATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAGAGGAGGTAGAACTTCCCAGGCTTCAGAGAAGAAAAGTGGTCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGAAATAACACGCTTCAAGACTTCGGGTAATGTTATGTTTACCTTCGTCCTATGCATGCATCAGTTTGCTGGTTAATGTGTTTTGAACTGCTAGAAGAATACATAACCTTGTATATGCCACATGCTACATGGGCCTTTTTGACGTATAACAGAAACATGCTTTTTGTATCAACCATTTTGACTTGGAATAGAAATGAGACCGTGTTTTCGCCATGGAGCGGGTCAACATTTGGAATGTCAATTCACCCGAAGAATGAGATTGGGTTTTAATGAAATTATGCCATTTCTAGGGGCAATTTGGTAGGTAGTTTGAATTTTGTTTTATGATTTCGGATTCATTAGGTCTACAAATTATGTATTTGGTCGGCAATCTAGATGCAATTATGTGATAGCCCCCCGTTGCTCTTTACATATACATTATTGTTGATAGCCTTACCTTCACTAATTATCTTCAAGAAGGTCTTCGGTACTACTCAGCCAGTTTTAAGAGAGAAATTAGTGGAGACTTGTAGATGGAGGGAAGTATCTTCCAAACATTTAAGGCTTACAATCTCTAAGAATCGTTCATGGGGTGTTGTTGCTTATTT

mRNA sequence

ATGGCAAAAAGATTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCTATGTCAGTTATTAAATATGATGATATTCGGCAACGGCTTCTGAGCAGTAGGAAAGATGAAGACATCTCACCCTTCACTGCTGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATTGATCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGTGGTGTTAGCAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCCCGTGCAGCTGAATCAATTGCAGATGGTGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTTTCTCAAAGTAGTTGTATTGCTTCTTGTATAATCCCAGCTTCGTTATTGCATGGGCAAAGAGAAACGCTTGAGCAGTTTGAGCGTAATTTTAATAGATTTGGTGCATGGCTGGGAAAGAATTCCACATTTGGAAAAAATATGAGACTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAATCCTGTTCAGGGAGGGAACACCTACGAGTTGAGAACCTTACTCTGTTTCTAAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGATGAGGCTGTTAAAACAGTGGTTGAATTTATGAGCCTATACTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCACTAGATGGAGTTGCCCCCGCAGTCAAAGCTGCTCTAACCAAGGCATACAAAGAAGCAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTCCTGGAATGAAAAAAGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCTACTGAGGATACTGTTGAAGGTGCTGGGGGAGAGACATTGGTGGAAAGTGATGATGAAAACTCTGTGGACAATGAGGGCGAAGAAAACTCCACAAATGGTGAGAAGCTGCAATTAGAACTTCAAAGCTTGAACAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGTGTGGAAGATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAGAGGAGGTAGAACTTCCCAGGCTTCAGAGAAGAAAAGTGGTCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGAAATAACACGCTTCAAGACTTCGGGTAATGTTATGTTTACCTTCGTCCTATGCATGCATCAGTTTGCTGGTTAATGTGTTTTGAACTGCTAGAAGAATACATAACCTTGTATATGCCACATGCTACATGGGCCTTTTTGACGTATAACAGAAACATGCTTTTTGTATCAACCATTTTGACTTGGAATAGAAATGAGACCGTGTTTTCGCCATGGAGCGGGTCAACATTTGGAATGTCAATTCACCCGAAGAATGAGATTGGGTTTTAATGAAATTATGCCATTTCTAGGGGCAATTTGGTAGGTAGTTTGAATTTTGTTTTATGATTTCGGATTCATTAGGTCTACAAATTATGTATTTGGTCGGCAATCTAGATGCAATTATGTGATAGCCCCCCGTTGCTCTTTACATATACATTATTGTTGATAGCCTTACCTTCACTAATTATCTTCAAGAAGGTCTTCGGTACTACTCAGCCAGTTTTAAGAGAGAAATTAGTGGAGACTTGTAGATGGAGGGAAGTATCTTCCAAACATTTAAGGCTTACAATCTCTAAGAATCGTTCATGGGGTGTTGTTGCTTATTT

Coding sequence (CDS)

ATGGCAAAAAGATTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCTATGTCAGTTATTAAATATGATGATATTCGGCAACGGCTTCTGAGCAGTAGGAAAGATGAAGACATCTCACCCTTCACTGCTGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATTGATCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGTGGTGTTAGCAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCCCGTGCAGCTGAATCAATTGCAGATGGTGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTTTCTCAAAGTAGTTGTATTGCTTCTTGTATAATCCCAGCTTCGTTATTGCATGGGCAAAGAGAAACGCTTGAGCAGTTTGAGCGTAATTTTAATAGATTTGGTGCATGGCTGGGAAAGAATTCCACATTTGGAAAAAATATGAGACTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAATCCTGTTCAGGGAGGGAACACCTACGAGTTGAGAACCTTACTCTGTTTCTAAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGATGAGGCTGTTAAAACAGTGGTTGAATTTATGAGCCTATACTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCACTAGATGGAGTTGCCCCCGCAGTCAAAGCTGCTCTAACCAAGGCATACAAAGAAGCAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTCCTGGAATGAAAAAAGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCTACTGAGGATACTGTTGAAGGTGCTGGGGGAGAGACATTGGTGGAAAGTGATGATGAAAACTCTGTGGACAATGAGGGCGAAGAAAACTCCACAAATGGTGAGAAGCTGCAATTAGAACTTCAAAGCTTGAACAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGTGTGGAAGATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAGAGGAGGTAGAACTTCCCAGGCTTCAGAGAAGAAAAGTGGTCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGA

Protein sequence

MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR*

Homology

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BLAST of MELO3C014529 vs. Swiss-Prot
Match: RFC1_ARATH (Replication factor C subunit 1 OS=Arabidopsis thaliana GN=RFC1 PE=2 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 8.6e-168
Identity = 303/427 (70.96%), Postives = 353/427 (82.67%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+ +A AEGL++NEIALEELAERVNGD+R+A+NQLQY+SLSMSVIKYDDIRQRLLS
Sbjct: 534 MAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLS 593

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DLVPLLIQENY+NYRPSG  KD+
Sbjct: 594 SAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPSG--KDE 653

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
              KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS C+AS I+PASLLHG RE LEQ 
Sbjct: 654 --AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVLEQG 713

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFG WLGKNST GKN RL+EDLHVH+LASRES +GRE LRV+ L L L RLT PL
Sbjct: 714 ERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLPLLLSRLTSPL 773

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
            TLPKDEAV  VV+FM+ YSISQEDFDT+LEL KF+GR+NP++GV P VKAALTK Y E 
Sbjct: 774 QTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPVKAALTKKYNEM 833

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVD-NEGEE 360
           +KT MVR AD++ LPG+KKAPKKRIAA+LEPT D++    GE L ++++ N  D  E  E
Sbjct: 834 NKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEEGNGSDAEEDSE 893

Query: 361 NSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRG-GRTSQASEKKSGRGSG 420
            +T+GEKL+  L++LN +G+QV+LDLKG   S ++K+ G+GRG G+ +  S +K   G G
Sbjct: 894 EATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAADTSAEKKATGRG 953

Query: 421 SATKRKR 426
           S  KRKR
Sbjct: 954 SGAKRKR 956

HSP 2 Score: 32.3 bits (72), Expect = 1.5e+01
Identity = 35/130 (26.92%), Postives = 55/130 (42.31%), Query Frame = 1


Query: 294 TKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSV 353
           T  Y    KT +    ++  +P  +K  K     +++P    V      T V  DD++  
Sbjct: 56  TSKYFGKDKTKVKDEKEVEAIPAKRKL-KTESDDLVKPRPRKV------TKVVDDDDDDF 115

Query: 354 D---NEGEENSTNGEKLQLEL-QSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQ-A 413
           D   +    ++T  +KL+    + +  K +    D  G +  +  KS GRGRGGR +  A
Sbjct: 116 DVPISRKTRDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDKETPLKSAGRGRGGRAAPGA 175

Query: 414 SEKKSGRGSG 419
           S    GRG G
Sbjct: 176 STGGRGRGGG 178

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BLAST of MELO3C014529 vs. Swiss-Prot
Match: RFC1_ORYSJ (Replication factor C subunit 1 OS=Oryza sativa subsp. japonica GN=RFC1 PE=2 SV=2)

HSP 1 Score: 525.4 bits (1352), Expect = 5.8e-148
Identity = 272/426 (63.85%), Postives = 329/426 (77.23%), Query Frame = 1


Query: 1    MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
            M KRL+++A  EGLQ  E A+EELAERV+GD+RMALN LQY+SLS SV+KYDDIRQRL S
Sbjct: 600  MGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQRLNS 659

Query: 61   SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
            S KDEDISPFTAVDKLFGFN G+LRMDERIDLSMSD DLVPL+IQENYINYRP  V KDD
Sbjct: 660  STKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITVGKDD 719

Query: 121  NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
            +G+KRM+ +ARAAESIAD DI+NVQIRR+RQWQLSQ++C++S I+PA+L+HG RE LE  
Sbjct: 720  SGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNREILEAG 779

Query: 181  ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
            ERNFNRFG WLGK ST  KN+RLLED H HILAS+++   RE LR++ LTL L++LT+PL
Sbjct: 780  ERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRLDYLTLLLRQLTDPL 839

Query: 241  HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
             T+PKDEAV+ VVEFM  YS+SQEDFDT++ELSKF+G  NP+DG+ PAVK+ALTKAYK+ 
Sbjct: 840  KTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTKAYKQG 899

Query: 301  SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
            S + +VRAADL+ +PGMKK  KKR+AAILEP  +++    G    E D+E+S D E  + 
Sbjct: 900  SSSRVVRAADLVNIPGMKKPLKKRVAAILEPVGESLPEENGVASSEGDEEDSSDAENNDE 959

Query: 361  STNGE-KLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGS 420
               G+ K +L+LQS  KKG+QVQLDLK   +    K    GR    S+AS        GS
Sbjct: 960  LVPGDTKPKLDLQSDKKKGIQVQLDLKSNGNGLNSKKMPAGR----SKASGSAGKAAGGS 1019

Query: 421  ATKRKR 426
              KRKR
Sbjct: 1020 GGKRKR 1021

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BLAST of MELO3C014529 vs. Swiss-Prot
Match: RFC1_HUMAN (Replication factor C subunit 1 OS=Homo sapiens GN=RFC1 PE=1 SV=4)

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-38
Identity = 112/398 (28.14%), Postives = 190/398 (47.74%), Query Frame = 1


Query: 5    LIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKD 64
            ++ +A  EGL++   A+ E+    N D+R  L+ L         + YD  +     ++KD
Sbjct: 784  MMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKD 843

Query: 65   EDISPFTAVDKLF--GFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNG 124
              + PF    K+F  G  +  + + ++ DL   D  + PL +QENYI+ +P     D   
Sbjct: 844  IKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMK- 903

Query: 125  IKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFER 184
             K + L++RAA+SI DGD+++ QIR  + W L  +  I + ++P  L+ G       +  
Sbjct: 904  -KHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRG-------YMT 963

Query: 185  NFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHT 244
             F  F +WLGK+S+ GK+ R+++DL +H+  S  + S +  + ++ L+L    L +PL +
Sbjct: 964  QFPTFPSWLGKHSSTGKHDRIVQDLALHM--SLRTYSSKRTVNMDYLSLLRDALVQPLTS 1023

Query: 245  LPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAY-KEAS 304
               D  V+ VV  M  Y + +EDF+ ++E+S + G+ +P   + P VKAA T+AY KEA 
Sbjct: 1024 QGVD-GVQDVVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAH 1083

Query: 305  KTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENS 364
             T     A               I A    T  +++    E L          NE +  S
Sbjct: 1084 LTPYSLQA---------------IKASRHSTSPSLDSEYNEEL----------NEDDSQS 1143

Query: 365  TNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGR 400
               ++  +E  ++ KK  +     K  +D   +K  G+
Sbjct: 1144 DEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKGKGK 1144

[Close]

BLAST of MELO3C014529 vs. Swiss-Prot
Match: RFC1_MOUSE (Replication factor C subunit 1 OS=Mus musculus GN=Rfc1 PE=1 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 9.2e-37
Identity = 102/351 (29.06%), Postives = 176/351 (50.14%), Query Frame = 1


Query: 5    LIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKD 64
            ++ +A  EGL++   A+ E+    N D+R  L+ L         + YD  +     ++KD
Sbjct: 768  MLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRAKKD 827

Query: 65   EDISPFTAVDKLF--GFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNG 124
              + PF    K+F  G  +  + + ++ DL   D  + PL +QENY++ +P     D   
Sbjct: 828  IRLGPFDVTRKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMK- 887

Query: 125  IKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFER 184
             K + L++RAA+SI DGD+++ QIR  + W L  +  I + ++P  L+ G       +  
Sbjct: 888  -KHLMLLSRAADSICDGDLVDNQIRSKQNWSLLPTQAIYASVLPGELMRG-------YMT 947

Query: 185  NFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHT 244
             F  F +WLGK+S+ GK+ R+++DL +H+  S  + S +  + ++ L+     L  PL T
Sbjct: 948  QFPSFPSWLGKHSSTGKHDRIVQDLSLHM--SLRTYSSKRTVNMDYLSHIRDALVRPL-T 1007

Query: 245  LPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAY-KEAS 304
                E  + V++ M  Y + +EDF+ ++E+S + G+ +    + P VKAA T+AY KEA 
Sbjct: 1008 SQGVEGAQHVIKLMDTYYLMKEDFENIMEVSSWGGKPSAFSKLDPKVKAAFTRAYNKEAH 1067

Query: 305  KT----HMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESD 349
             T     +V+ + L T P +     +      E  ED  +    +  VE+D
Sbjct: 1068 LTPYSLQVVKTSRLSTGPALDSEYSE------EFQEDDTQSEKEQDAVETD 1100

[Close]

BLAST of MELO3C014529 vs. Swiss-Prot
Match: RFC1_DICDI (Probable replication factor C subunit 1 OS=Dictyostelium discoideum GN=rfc1 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.3e-34
Identity = 109/418 (26.08%), Postives = 197/418 (47.13%), Query Frame = 1


Query: 1    MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
            ++ RL+ +A  EG++V+   +E++    + D+R ++N LQ +S S      D++ Q L  
Sbjct: 1034 VSSRLLAIAKHEGMKVSSYMIEKVYTSSHSDIRQSINTLQMMSRSKRDYNNDNVTQSL-- 1093

Query: 61   SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
              KD DISPFTA + +   ++  +  ++++D   SD  LVPL+IQENY+  RP G     
Sbjct: 1094 QEKDFDISPFTAAELILREDNSNI--NKKLDYFFSDFSLVPLIIQENYLKTRPYG-GGSQ 1153

Query: 121  NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
            +     +LI+ AA++++D D     I +   W L  +  + SCIIP+  + G       F
Sbjct: 1154 SKYNDCELISMAADALSDSDQFGRAIGKEMAWNLLPTYGVTSCIIPSGYIRGSPPMPLSF 1213

Query: 181  ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
                    ++LGK S   K  R + +L +H+ ++  +   R+  R+  + +    L +PL
Sbjct: 1214 P-------SYLGKYSNASKQQRFVRELQLHMRSTSNTFVNRDETRLYYVPMLKHHLIQPL 1273

Query: 241  HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
                 ++ ++ V+  M  Y ++++D + ++ELS + G+++PL  V   VK+A T+ ++  
Sbjct: 1274 -VQDDNDGIENVINVMDEYGLTEDDRNNIIELSTW-GKEDPLKDVKTQVKSAFTRKFR-- 1333

Query: 301  SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETL------VESDDENSVD 360
            S +H +    L++  G                     G GG  +      VE + +N ++
Sbjct: 1334 STSHAIYDVSLLSSKG--------------------SGGGGTNIAEGYEEVEGESQNQIE 1393

Query: 361  NEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 413
             E EE           L +L KK       +K   D+  K +  +     T+  S+KK
Sbjct: 1394 EEDEETEEKD-----SLPNLVKKS-----SVKSKSDTKPKSTKSKS----TTTKSKKK 1401

[Close]

BLAST of MELO3C014529 vs. TrEMBL
Match: A0A0A0KEG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426950 PE=4 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 4.5e-232
Identity = 415/425 (97.65%), Postives = 421/425 (99.06%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+QVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS
Sbjct: 544 MAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 603

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S+KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPS VSKDD
Sbjct: 604 SKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAVSKDD 663

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
            GIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSC+ASCIIPASLLHGQRETLEQ+
Sbjct: 664 TGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRETLEQY 723

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL
Sbjct: 724 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 783

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
           HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 784 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 843

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKTHMVRAADLI LPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN
Sbjct: 844 SKTHMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 903

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSA 420
           STNG+KLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRG+GGRTSQASEKK GRGSGSA
Sbjct: 904 STNGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQASEKKGGRGSGSA 963

Query: 421 TKRKR 426
           TKRKR
Sbjct: 964 TKRKR 968

[Close]

BLAST of MELO3C014529 vs. TrEMBL
Match: M5VGU4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000922mg PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 3.4e-179
Identity = 330/426 (77.46%), Postives = 367/426 (86.15%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+Q+ANAEGL+VNEIALEELAE+VNGDMRMA+NQLQY+SLSMSVIKYDD+RQRLLS
Sbjct: 537 MAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLS 596

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S KDEDISPFTAVDKLFGFN+GKLRMDER+DLSMSD DLVPLLIQENYINYRPS   KDD
Sbjct: 597 SAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAVKDD 656

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
           +GIKRM+LIA AAESI +GDI NVQIR++RQWQLSQS+C++S I PA+LL GQRETLEQ 
Sbjct: 657 SGIKRMNLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLEQG 716

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFG WLGKNST GKN RLLEDLHVH+LASRES SGRE LRVE L+L LKRLT PL
Sbjct: 717 ERNFNRFGGWLGKNSTLGKNSRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTVPL 776

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
             LPKDEAV  VV+FM+ YSISQ+DFDT++ELSKFQG  NPLDG+ PAVKAALTKAYKE 
Sbjct: 777 RELPKDEAVHKVVDFMNTYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKEG 836

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKT MVRAAD +TLPGMKKAPKKRIAAILEP+ D +     +TLVES++ENS D E  E 
Sbjct: 837 SKTRMVRAADFVTLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDLEG 896

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKS-GGRGRGGRTSQASEKKSGRGSGS 420
           S  GEKLQ ELQSLN KG+ VQ DLKG  +SSAKK+  GRGRGG +S A+EKK GRGSG 
Sbjct: 897 SAAGEKLQQELQSLNTKGVHVQFDLKGATNSSAKKTPTGRGRGG-SSAAAEKKGGRGSGP 956

Query: 421 ATKRKR 426
             KRKR
Sbjct: 957 GGKRKR 961

[Close]

BLAST of MELO3C014529 vs. TrEMBL
Match: A0A0B0Q3A8_GOSAR (Replication factor c large subunit OS=Gossypium arboreum GN=F383_14355 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 1.6e-176
Identity = 325/441 (73.70%), Postives = 370/441 (83.90%), Query Frame = 1


Query: 1    MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
            MAKRL+QVANAEGLQVNEIALEELAERVNGDMRMALNQLQY+SLSMSVI Y+DI+QRLLS
Sbjct: 566  MAKRLMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYNDIKQRLLS 625

Query: 61   SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
            S KDEDISPFTAVDKLFGFN GKLRMDERIDLSMSD DLVPLL+QENYINYRPS + KDD
Sbjct: 626  SSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLVQENYINYRPSSIGKDD 685

Query: 121  NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
            +GIKRM+ IARAAESI DGDIINVQIRR+RQWQLSQ+S ++SCIIPA+LLHGQRETLEQ 
Sbjct: 686  SGIKRMNSIARAAESIGDGDIINVQIRRYRQWQLSQTSALSSCIIPAALLHGQRETLEQG 745

Query: 181  ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
            ERNFNRFG WLGKNST  KN RLLED HVH LASRESCSGRE LR+E L + LKRLT PL
Sbjct: 746  ERNFNRFGGWLGKNSTMSKNYRLLEDFHVHFLASRESCSGRETLRLEYLPILLKRLTNPL 805

Query: 241  HTLPK---------------DEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGV 300
              +PK               DEAVK V+EFM+ YSISQEDFDT++ELSKFQG  NP++G+
Sbjct: 806  RDMPKGCCFKVFPFFSDVEQDEAVKQVLEFMNAYSISQEDFDTIVELSKFQGYPNPMEGI 865

Query: 301  APAVKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLV 360
              AVKAALTKAYKE SKT ++RAADL+TLPGMKKAPKKRIAAILEP++D +    G+ L 
Sbjct: 866  PSAVKAALTKAYKEGSKTRIIRAADLVTLPGMKKAPKKRIAAILEPSDDVLGEENGDELP 925

Query: 361  ESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKS-GGRGRGGR 420
            E +DEN+ D+E  E +TNGEKLQ ELQSLN KG++VQ++LKG  +SSAKK+  GR +GG 
Sbjct: 926  E-NDENTSDSEDLEGTTNGEKLQAELQSLNSKGIEVQMELKGTGNSSAKKAPSGRAKGGG 985

Query: 421  TSQASEKKSGRGSGSATKRKR 426
             + ++EKK GRGSG+  KRKR
Sbjct: 986  RAASAEKKGGRGSGAGAKRKR 1005

[Close]

BLAST of MELO3C014529 vs. TrEMBL
Match: A0A0B0Q3A8_GOSAR (Replication factor c large subunit OS=Gossypium arboreum GN=F383_14355 PE=4 SV=1)

HSP 1 Score: 33.1 bits (74), Expect = 1.0e+03
Identity = 20/36 (55.56%), Postives = 22/36 (61.11%), Query Frame = 1


Query: 384 DLKGVEDSSAKKSGGRGRGGR-TSQASEKKSGRGSG 419
           D+K +E  S  KSGGRGRGGR  S  S    GRG G
Sbjct: 176 DIKDLE--SPVKSGGRGRGGRGASTGSASGRGRGGG 209

HSP 2 Score: 624.0 bits (1608), Expect = 1.3e-175
Identity = 324/426 (76.06%), Postives = 369/426 (86.62%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+QVANAEGLQVNEIAL+ELAERVNGDMRMALNQLQY+SLSMSVIKYDDIRQRLLS
Sbjct: 532 MAKRLMQVANAEGLQVNEIALQELAERVNGDMRMALNQLQYMSLSMSVIKYDDIRQRLLS 591

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
             KDEDISPFTAVDKLFG   GKLRMD+RIDLSMSD DLVPLLIQENYINYRPS + KDD
Sbjct: 592 GSKDEDISPFTAVDKLFGIYGGKLRMDQRIDLSMSDPDLVPLLIQENYINYRPSSIGKDD 651

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
           +G+KRM+LIA+AAESI DGDIINVQIRR+RQWQLSQ+  ++SCIIPA+LLHGQRETLEQ 
Sbjct: 652 SGMKRMNLIAQAAESIGDGDIINVQIRRYRQWQLSQAGSLSSCIIPAALLHGQRETLEQG 711

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFG WLGKNST  KN RLLEDLHVHILASRES SGRE LR++ LT+ L +LT PL
Sbjct: 712 ERNFNRFGGWLGKNSTMSKNYRLLEDLHVHILASRESSSGRETLRLDYLTVLLTQLTNPL 771

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
              PKDEAVK VVEFM+ YSISQEDFDTV+ELSKFQG+ NPL+G+  AVKAALTKAY E 
Sbjct: 772 RDKPKDEAVKQVVEFMNAYSISQEDFDTVVELSKFQGQSNPLEGIPAAVKAALTKAYNEG 831

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKT MVRAADL+TLPGMKKAPKKRIAAILEP++D +    G+TL ES++++S D E  E 
Sbjct: 832 SKTQMVRAADLVTLPGMKKAPKKRIAAILEPSDDVLGEENGDTLPESEEKSS-DTEDLEG 891

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKS-GGRGRGGR-TSQASEKKSGRGSG 420
           +T+GE L+ ELQSLN KG++VQ++LKG  +SSAKK+  GRGRGG+  S ++EKK GRGSG
Sbjct: 892 TTDGETLRAELQSLNSKGIEVQMELKGTGNSSAKKAPAGRGRGGKGASGSAEKKGGRGSG 951

Query: 421 SATKRK 425
           +  KRK
Sbjct: 952 AGAKRK 956

[Close]

BLAST of MELO3C014529 vs. TrEMBL
Match: W9QX95_9ROSA (Replication factor C subunit 1 OS=Morus notabilis GN=L484_011394 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.4e-172
Identity = 319/426 (74.88%), Postives = 362/426 (84.98%), Query Frame = 1


Query: 1    MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
            MAKRL+QVAN+EGLQVNEIALEELAERV+GDMRMALNQL Y+SLSMSVIKYDD+RQRLL+
Sbjct: 623  MAKRLMQVANSEGLQVNEIALEELAERVSGDMRMALNQLHYMSLSMSVIKYDDVRQRLLA 682

Query: 61   SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
            S KDEDISPFTAVDKLFGFN+GKLRMDER+DLSMSDLDLVPLLIQENY+NYRPS V KDD
Sbjct: 683  SAKDEDISPFTAVDKLFGFNAGKLRMDERMDLSMSDLDLVPLLIQENYVNYRPSSVGKDD 742

Query: 121  NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
            NGI RM LIARAAESI DGDI NVQIR++RQWQLSQSS ++SCIIP +LLHGQR+ LEQ 
Sbjct: 743  NGISRMSLIARAAESIGDGDIFNVQIRKYRQWQLSQSSALSSCIIPTALLHGQRQILEQG 802

Query: 181  ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
            ERNFNRF  WLGKNSTF KNMRLLEDLHVH+LASRES SGR  LR+E LTL LKRLTEPL
Sbjct: 803  ERNFNRFSGWLGKNSTFNKNMRLLEDLHVHLLASRESNSGRGTLRIEYLTLLLKRLTEPL 862

Query: 241  HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
              LPKD AV+ VV+FM+ YSISQEDFDT++ELSKF+GR +PL G+A AVKAALT+AYKE 
Sbjct: 863  RVLPKDGAVREVVDFMNTYSISQEDFDTIVELSKFKGRPDPLGGIASAVKAALTRAYKEG 922

Query: 301  SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
            SK+ MVR AD +TLPG+KKAPKKRIAAILEP+++ V     E   E ++EN  D E  E+
Sbjct: 923  SKSRMVRTADFVTLPGIKKAPKKRIAAILEPSDEGVGENNEEAAAEIEEENLSDTEDLED 982

Query: 361  STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKS-GGRGRGGRTSQASEKKSGRGSGS 420
            S  GEKLQ ELQSLNKKG+QV LDLK    SSAKK+  GRG+GG +S A +K + RGS +
Sbjct: 983  SAAGEKLQKELQSLNKKGVQVHLDLKDSGKSSAKKAPTGRGKGG-SSAADKKTTARGSAT 1042

Query: 421  ATKRKR 426
            + KRKR
Sbjct: 1043 SAKRKR 1047

[Close]

BLAST of MELO3C014529 vs. TAIR10
Match: AT5G22010.1 (AT5G22010.1 replication factor C1)

HSP 1 Score: 591.3 bits (1523), Expect = 4.9e-169
Identity = 303/427 (70.96%), Postives = 353/427 (82.67%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+ +A AEGL++NEIALEELAERVNGD+R+A+NQLQY+SLSMSVIKYDDIRQRLLS
Sbjct: 534 MAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLS 593

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DLVPLLIQENY+NYRPSG  KD+
Sbjct: 594 SAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPSG--KDE 653

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
              KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS C+AS I+PASLLHG RE LEQ 
Sbjct: 654 --AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVLEQG 713

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFG WLGKNST GKN RL+EDLHVH+LASRES +GRE LRV+ L L L RLT PL
Sbjct: 714 ERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLPLLLSRLTSPL 773

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
            TLPKDEAV  VV+FM+ YSISQEDFDT+LEL KF+GR+NP++GV P VKAALTK Y E 
Sbjct: 774 QTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPVKAALTKKYNEM 833

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVD-NEGEE 360
           +KT MVR AD++ LPG+KKAPKKRIAA+LEPT D++    GE L ++++ N  D  E  E
Sbjct: 834 NKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEEGNGSDAEEDSE 893

Query: 361 NSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRG-GRTSQASEKKSGRGSG 420
            +T+GEKL+  L++LN +G+QV+LDLKG   S ++K+ G+GRG G+ +  S +K   G G
Sbjct: 894 EATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAADTSAEKKATGRG 953

Query: 421 SATKRKR 426
           S  KRKR
Sbjct: 954 SGAKRKR 956

HSP 2 Score: 32.3 bits (72), Expect = 8.7e-01
Identity = 35/130 (26.92%), Postives = 55/130 (42.31%), Query Frame = 1


Query: 294 TKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSV 353
           T  Y    KT +    ++  +P  +K  K     +++P    V      T V  DD++  
Sbjct: 56  TSKYFGKDKTKVKDEKEVEAIPAKRKL-KTESDDLVKPRPRKV------TKVVDDDDDDF 115

Query: 354 D---NEGEENSTNGEKLQLEL-QSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQ-A 413
           D   +    ++T  +KL+    + +  K +    D  G +  +  KS GRGRGGR +  A
Sbjct: 116 DVPISRKTRDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDKETPLKSAGRGRGGRAAPGA 175

Query: 414 SEKKSGRGSG 419
           S    GRG G
Sbjct: 176 STGGRGRGGG 178

[Close]

BLAST of MELO3C014529 vs. NCBI nr
Match: gi|659097408|ref|XP_008449609.1| (PREDICTED: replication factor C subunit 1 [Cucumis melo])

HSP 1 Score: 825.1 bits (2130), Expect = 5.7e-236
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS
Sbjct: 549 MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 608

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD
Sbjct: 609 SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 668

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
           NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF
Sbjct: 669 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 728

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL
Sbjct: 729 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 788

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
           HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 789 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 848

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN
Sbjct: 849 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 908

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSA 420
           STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSA
Sbjct: 909 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSA 968

Query: 421 TKRKR 426
           TKRKR
Sbjct: 969 TKRKR 973

[Close]

BLAST of MELO3C014529 vs. NCBI nr
Match: gi|778716792|ref|XP_011657597.1| (PREDICTED: replication factor C subunit 1 [Cucumis sativus])

HSP 1 Score: 811.6 bits (2095), Expect = 6.5e-232
Identity = 415/425 (97.65%), Postives = 421/425 (99.06%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+QVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS
Sbjct: 544 MAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 603

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S+KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPS VSKDD
Sbjct: 604 SKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAVSKDD 663

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
            GIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSC+ASCIIPASLLHGQRETLEQ+
Sbjct: 664 TGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRETLEQY 723

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL
Sbjct: 724 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 783

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
           HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 784 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 843

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKTHMVRAADLI LPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN
Sbjct: 844 SKTHMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 903

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSA 420
           STNG+KLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRG+GGRTSQASEKK GRGSGSA
Sbjct: 904 STNGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQASEKKGGRGSGSA 963

Query: 421 TKRKR 426
           TKRKR
Sbjct: 964 TKRKR 968

[Close]

BLAST of MELO3C014529 vs. NCBI nr
Match: gi|645263378|ref|XP_008237209.1| (PREDICTED: replication factor C subunit 1 isoform X2 [Prunus mume])

HSP 1 Score: 640.2 bits (1650), Expect = 2.6e-180
Identity = 332/426 (77.93%), Postives = 370/426 (86.85%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+Q+ANAEGL+VNEIALEELAE+VNGDMRMA+NQLQY+SLSMSVIKYDD+RQRLLS
Sbjct: 549 MAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLS 608

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S KDEDISPFTAVDKLFGFN+GKLRMDER+DLSMSD DLVPLLIQENYINYRPS   KDD
Sbjct: 609 SAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAVKDD 668

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
           +GIKRM+LIARAAESI +GDI NVQIR++RQWQLSQS+C++S I PA+LL GQRETLEQ 
Sbjct: 669 SGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLEQG 728

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFG WLGKNST GKN+RLLEDLHVH+LASRES SGRE LRVE L+L LKRLT PL
Sbjct: 729 ERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTVPL 788

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
             LPKDEAV  VV+FM+ YSISQ+DFDT++ELSKFQG  NPLDG+ PAVKAALTKAYKE 
Sbjct: 789 RELPKDEAVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKEG 848

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKT MVRAAD ITLPGMKKAPKKRIAAILEP+ D +     +TLVES++ENS D E  E 
Sbjct: 849 SKTRMVRAADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDLEG 908

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKS-GGRGRGGRTSQASEKKSGRGSGS 420
           S  GEKLQ ELQSLN KG+ VQ DLKG  +SSAKK+  GRGRGG +S A+EKK GRGSG+
Sbjct: 909 SAAGEKLQQELQSLNTKGVHVQFDLKGATNSSAKKTPTGRGRGG-SSAAAEKKGGRGSGA 968

Query: 421 ATKRKR 426
             KRKR
Sbjct: 969 GGKRKR 973

[Close]

BLAST of MELO3C014529 vs. NCBI nr
Match: gi|645263375|ref|XP_008237208.1| (PREDICTED: replication factor C subunit 1 isoform X1 [Prunus mume])

HSP 1 Score: 640.2 bits (1650), Expect = 2.6e-180
Identity = 332/426 (77.93%), Postives = 370/426 (86.85%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+Q+ANAEGL+VNEIALEELAE+VNGDMRMA+NQLQY+SLSMSVIKYDD+RQRLLS
Sbjct: 550 MAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLS 609

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S KDEDISPFTAVDKLFGFN+GKLRMDER+DLSMSD DLVPLLIQENYINYRPS   KDD
Sbjct: 610 SAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAVKDD 669

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
           +GIKRM+LIARAAESI +GDI NVQIR++RQWQLSQS+C++S I PA+LL GQRETLEQ 
Sbjct: 670 SGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLEQG 729

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFG WLGKNST GKN+RLLEDLHVH+LASRES SGRE LRVE L+L LKRLT PL
Sbjct: 730 ERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTVPL 789

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
             LPKDEAV  VV+FM+ YSISQ+DFDT++ELSKFQG  NPLDG+ PAVKAALTKAYKE 
Sbjct: 790 RELPKDEAVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKEG 849

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKT MVRAAD ITLPGMKKAPKKRIAAILEP+ D +     +TLVES++ENS D E  E 
Sbjct: 850 SKTRMVRAADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDLEG 909

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKS-GGRGRGGRTSQASEKKSGRGSGS 420
           S  GEKLQ ELQSLN KG+ VQ DLKG  +SSAKK+  GRGRGG +S A+EKK GRGSG+
Sbjct: 910 SAAGEKLQQELQSLNTKGVHVQFDLKGATNSSAKKTPTGRGRGG-SSAAAEKKGGRGSGA 969

Query: 421 ATKRKR 426
             KRKR
Sbjct: 970 GGKRKR 974

[Close]

BLAST of MELO3C014529 vs. NCBI nr
Match: gi|645263382|ref|XP_008237211.1| (PREDICTED: replication factor C subunit 1 isoform X4 [Prunus mume])

HSP 1 Score: 640.2 bits (1650), Expect = 2.6e-180
Identity = 332/426 (77.93%), Postives = 370/426 (86.85%), Query Frame = 1


Query: 1   MAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLS 60
           MAKRL+Q+ANAEGL+VNEIALEELAE+VNGDMRMA+NQLQY+SLSMSVIKYDD+RQRLLS
Sbjct: 540 MAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLS 599

Query: 61  SRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDD 120
           S KDEDISPFTAVDKLFGFN+GKLRMDER+DLSMSD DLVPLLIQENYINYRPS   KDD
Sbjct: 600 SAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSSAVKDD 659

Query: 121 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQF 180
           +GIKRM+LIARAAESI +GDI NVQIR++RQWQLSQS+C++S I PA+LL GQRETLEQ 
Sbjct: 660 SGIKRMNLIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLEQG 719

Query: 181 ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPL 240
           ERNFNRFG WLGKNST GKN+RLLEDLHVH+LASRES SGRE LRVE L+L LKRLT PL
Sbjct: 720 ERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTVPL 779

Query: 241 HTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEA 300
             LPKDEAV  VV+FM+ YSISQ+DFDT++ELSKFQG  NPLDG+ PAVKAALTKAYKE 
Sbjct: 780 RELPKDEAVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKEG 839

Query: 301 SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEEN 360
           SKT MVRAAD ITLPGMKKAPKKRIAAILEP+ D +     +TLVES++ENS D E  E 
Sbjct: 840 SKTRMVRAADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDLEG 899

Query: 361 STNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKS-GGRGRGGRTSQASEKKSGRGSGS 420
           S  GEKLQ ELQSLN KG+ VQ DLKG  +SSAKK+  GRGRGG +S A+EKK GRGSG+
Sbjct: 900 SAAGEKLQQELQSLNTKGVHVQFDLKGATNSSAKKTPTGRGRGG-SSAAAEKKGGRGSGA 959

Query: 421 ATKRKR 426
             KRKR
Sbjct: 960 GGKRKR 964

The following BLAST results are available for this feature:

BLAST of MELO3C014529 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RFC1_ARATH	8.6e-168	70.96	Replication factor C subunit 1 OS=Arabidopsis thaliana GN=RFC1 PE=2 SV=1	[more]
RFC1_ORYSJ	5.8e-148	63.85	Replication factor C subunit 1 OS=Oryza sativa subsp. japonica GN=RFC1 PE=2 SV=2	[more]
RFC1_HUMAN	2.2e-38	28.14	Replication factor C subunit 1 OS=Homo sapiens GN=RFC1 PE=1 SV=4	[more]
RFC1_MOUSE	9.2e-37	29.06	Replication factor C subunit 1 OS=Mus musculus GN=Rfc1 PE=1 SV=2	[more]
RFC1_DICDI	4.3e-34	26.08	Probable replication factor C subunit 1 OS=Dictyostelium discoideum GN=rfc1 PE=3...	[more]

BLAST of MELO3C014529 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEG6_CUCSA	4.5e-232	97.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426950 PE=4 SV=1	[more]
M5VGU4_PRUPE	3.4e-179	77.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000922mg PE=4 SV=1	[more]
A0A0B0Q3A8_GOSAR	1.6e-176	73.70	Replication factor c large subunit OS=Gossypium arboreum GN=F383_14355 PE=4 SV=1	[more]
A0A0B0Q3A8_GOSAR	1.0e+03	55.56	Replication factor c large subunit OS=Gossypium arboreum GN=F383_14355 PE=4 SV=1	[more]
W9QX95_9ROSA	1.4e-172	74.88	Replication factor C subunit 1 OS=Morus notabilis GN=L484_011394 PE=4 SV=1	[more]

BLAST of MELO3C014529 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22010.1	4.9e-169	70.96	replication factor C1	[more]

BLAST of MELO3C014529 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097408\|ref\|XP_008449609.1\|	5.7e-236	100.00	PREDICTED: replication factor C subunit 1 [Cucumis melo]	[more]
gi\|778716792\|ref\|XP_011657597.1\|	6.5e-232	97.65	PREDICTED: replication factor C subunit 1 [Cucumis sativus]	[more]
gi\|645263378\|ref\|XP_008237209.1\|	2.6e-180	77.93	PREDICTED: replication factor C subunit 1 isoform X2 [Prunus mume]	[more]
gi\|645263375\|ref\|XP_008237208.1\|	2.6e-180	77.93	PREDICTED: replication factor C subunit 1 isoform X1 [Prunus mume]	[more]
gi\|645263382\|ref\|XP_008237211.1\|	2.6e-180	77.93	PREDICTED: replication factor C subunit 1 isoform X4 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008921	DNA_pol3_clamp-load_cplx_C
IPR013725	DNA_replication_fac_RFC1_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003689	DNA clamp loader activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication

Vocabulary: **Cellular Component**
Term	Definition
GO:0005663	DNA replication factor C complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0000003	reproduction
biological_process	GO:0016043	cellular component organization
biological_process	GO:0080090	regulation of primary metabolic process
biological_process	GO:0060255	regulation of macromolecule metabolic process
biological_process	GO:1902275	regulation of chromatin organization
biological_process	GO:0031323	regulation of cellular metabolic process
biological_process	GO:0007126	meiotic nuclear division
biological_process	GO:0000712	resolution of meiotic recombination intermediates
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0051570	regulation of histone H3-K9 methylation
biological_process	GO:0031935	regulation of chromatin silencing
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009360	DNA polymerase III complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU58677	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014529T1	MELO3C014529T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU58677	MU58677	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	unknown	SSF48019	post-AAA+ oligomerization domain-like	coord: 67..212 score: 2.89
IPR013725	DNA replication factor RFC1, C-terminal	PFAM	PF08519	RFC1	coord: 136..298 score: 2.8
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 1..56 score: 6.2
None	No IPR available	GENE3D	G3DSA:1.20.272.10		coord: 68..180 score: 8.9
None	No IPR available	PANTHER	PTHR23389	CHROMOSOME TRANSMISSION FIDELITY FACTOR 18	coord: 1..417 score: 6.9E
None	No IPR available	PANTHER	PTHR23389:SF10	REPLICATION FACTOR C SUBUNIT 1	coord: 1..417 score: 6.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014529	Csa6G426950	Cucumber (Chinese Long) v2	cumeB491
MELO3C014529	Cla008609	Watermelon (97103) v1	mewmB419
MELO3C014529	ClCG02G022520	Watermelon (Charleston Gray)	mewcgB376
MELO3C014529	Cla97C02G048600	Watermelon (97103) v2	mewmbB377
MELO3C014529	Bhi10G000158	Wax gourd	mewgoB484
MELO3C014529	CSPI06G23510	Wild cucumber (PI 183967)	cpimeB493
MELO3C014529	Cucsa.086670	Cucumber (Gy14) v1	cgymeB098
MELO3C014529	CmaCh02G012960	Cucurbita maxima (Rimu)	cmameB572
MELO3C014529	CmaCh20G001380	Cucurbita maxima (Rimu)	cmameB521
MELO3C014529	CmoCh02G013360	Cucurbita moschata (Rifu)	cmomeB561
MELO3C014529	Lsi10G011270	Bottle gourd (USVL1VR-Ls)	lsimeB072
MELO3C014529	Cp4.1LG05g04590	Cucurbita pepo (Zucchini)	cpemeB696
MELO3C014529	CsGy6G022820	Cucumber (Gy14) v2	cgybmeB432
MELO3C014529	Carg18398	Silver-seed gourd	carmeB0423
MELO3C014529	Carg02665	Silver-seed gourd	carmeB0910
MELO3C014529	CsaV3_6G038660	Cucumber (Chinese Long) v3	cucmeB503

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014529	Cucurbita moschata (Rifu)	cmomeB509
MELO3C014529	Cucurbita pepo (Zucchini)	cpemeB278