MELO3C014490 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014490
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Tapetum determinant protein
Location	chr5 : 1979597 .. 1980133 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGCGGCGGGTGTTATTGCAACTTCGTCTTTCTTCAGAGCTTCTCTTCTTTTATTCTTCCATCTCCTTTTACTTTCTTCCTTTATTTCCACCGAAGGTAACATTCTTCTACACCACCTTTTCTTTTTCTTTAATTATATATATGTTCAACATTCTATATACTAAAGTTGAAAGTACTAAAAGTATAATCAAACCTAATGATATGAATTAGGTGGAACATTAGAAAAGAAATGCGAAGGAAATTCGATAGCAATAAGCCAAGGACAAGAGAGCAGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAAATCAGTGTTTAGACAAGTGCACCATATACGATCTTCATCTCAAATGTGGATCCTTCGTATCATCTAACTTAATAAATCCTCAAATCTTTAAAAGACTTACCGTCGACGATTGTCTTGTCAACAATGGATCGCCAATCGTCTATGGTGAAACTATTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCCGTTTCTTCTTTTAAATGTTAA

mRNA sequence

ATGGCTATGGCGGCGGGTGTTATTGCAACTTCGTCTTTCTTCAGAGCTTCTCTTCTTTTATTCTTCCATCTCCTTTTACTTTCTTCCTTTATTTCCACCGAAGGTGGAACATTAGAAAAGAAATGCGAAGGAAATTCGATAGCAATAAGCCAAGGACAAGAGAGCAGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAAATCAGTGTTTAGACAAGTGCACCATATACGATCTTCATCTCAAATGTGGATCCTTCGTATCATCTAACTTAATAAATCCTCAAATCTTTAAAAGACTTACCGTCGACGATTGTCTTGTCAACAATGGATCGCCAATCGTCTATGGTGAAACTATTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCCGTTTCTTCTTTTAAATGTTAA

Coding sequence (CDS)

ATGGCTATGGCGGCGGGTGTTATTGCAACTTCGTCTTTCTTCAGAGCTTCTCTTCTTTTATTCTTCCATCTCCTTTTACTTTCTTCCTTTATTTCCACCGAAGGTGGAACATTAGAAAAGAAATGCGAAGGAAATTCGATAGCAATAAGCCAAGGACAAGAGAGCAGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAAATCAGTGTTTAGACAAGTGCACCATATACGATCTTCATCTCAAATGTGGATCCTTCGTATCATCTAACTTAATAAATCCTCAAATCTTTAAAAGACTTACCGTCGACGATTGTCTTGTCAACAATGGATCGCCAATCGTCTATGGTGAAACTATTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCCGTTTCTTCTTTTAAATGTTAA

Protein sequence

MAMAAGVIATSSFFRASLLLFFHLLLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC*

Homology

[Close]

BLAST of MELO3C014490 vs. Swiss-Prot
Match: TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-25
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1


Query: 32  STEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSS 91
           S E   + +KC+   I ++Q     M NGIP Y V+ITNQC+  C I  +H+ CG F S+
Sbjct: 67  SVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSA 126

Query: 92  NLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
            LINP++FKR+  DDCLVNNG P+ +G T+SF YA TF + LSV+   C
Sbjct: 127 KLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of MELO3C014490 vs. Swiss-Prot
Match: TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.9e-24
Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1


Query: 25  LLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLK 84
           LLLS  I      + + C  + I + QG  + + +G+P+Y V+I N C+  C I ++H+ 
Sbjct: 63  LLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVS 122

Query: 85  CGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           CG F S  L+NP++F+RL  DDCLVN+G P+  G+++SFQYA +F +PLSV+S  C
Sbjct: 123 CGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of MELO3C014490 vs. Swiss-Prot
Match: TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-19
Identity = 48/128 (37.50%), Postives = 76/128 (59.38%), Query Frame = 1


Query: 30  FISTEGG----------TLEKKCEG-NSIAISQGQESRMFNGIPTYRVQITNQCL----- 89
           F+S  GG           ++  C G + IAI QG+ + + +G+P Y V + N+C      
Sbjct: 92  FVSGSGGGGGGDGVRTRRVDDGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGG 151

Query: 90  -DKCTIYDLHLKCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFP 141
            ++C I  +H++CG F S +L++P++F+RL  DDCL+N+G P++ GET+SF+Y  +F + 
Sbjct: 152 DEECAIAGIHVRCGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYK 211

[Close]

BLAST of MELO3C014490 vs. Swiss-Prot
Match: TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-19
Identity = 48/138 (34.78%), Postives = 74/138 (53.62%), Query Frame = 1


Query: 9   ATSSFFRASLLLFFHLLLLSSFISTEGGT------LEKKCEGNSIAISQGQESRMFNGIP 68
           ++SS  ++  L    LL +S   S  GG           C   ++ + Q     + +GIP
Sbjct: 32  SSSSAMQSKTLNMNKLLNISEDHSPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIP 91

Query: 69  TYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETIS 128
           TY V+I N C   CT+YD+H+ CG F S+ L++P  F+R+  +DCLV  G  +   E +S
Sbjct: 92  TYSVEIINVCT-ACTVYDVHISCGEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVS 151

Query: 129 FQYATTFMFPLSVSSFKC 141
           FQY+ +F +PL+V++  C
Sbjct: 152 FQYSNSFAYPLAVANVAC 168

[Close]

BLAST of MELO3C014490 vs. Swiss-Prot
Match: Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 1


Query: 42  CEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKR 101
           CEG S   +  Q    +     +RV++ N+C   C I +L LKC  F  S L++P   + 
Sbjct: 26  CEGKSSEPAVRQTQVKWREGKKFRVEVMNKC-PMCPIINLRLKCQGFPQS-LVDPTFLRV 85

Query: 102 LT--VDDCLVNNGSPIVYGETISFQYATTFMF---PLSVSSFKC 141
           L+    +C+VN+G P+   +T+SF Y+ T  F   PLS  SF+C
Sbjct: 86  LSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLS-WSFQC 126

[Close]

BLAST of MELO3C014490 vs. TrEMBL
Match: V4MEA8_EUTSA (Uncharacterized protein (Fragment) OS=Eutrema salsugineum GN=EUTSA_v10027160mg PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-26
Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 1


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC+G+ I ++Q     M NGIP YRV+ITNQC+  C I  +H+ CG F S+ LINP++F
Sbjct: 14  EKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRLF 73

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           KR+  DDCLVNNG P+ YG T+SFQYA TF +PLSVS   C
Sbjct: 74  KRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 114

[Close]

BLAST of MELO3C014490 vs. TrEMBL
Match: A0A0A0LUG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051700 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-26
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP++F
Sbjct: 81  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVF 140

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           KRL  DDCLVN+G P+VYG T+SFQYA T+ +PLSVSS  C
Sbjct: 141 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

[Close]

BLAST of MELO3C014490 vs. TrEMBL
Match: V7AW39_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G162500g PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-25
Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 1


Query: 31  ISTEGGTLE------KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLK 90
           +++E G +E      +KC  + I I+QG  + + +GIPTY V+I N C+  C I  +HL+
Sbjct: 63  LTSENGKMEPNRIWGEKCSKSDIVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLR 122

Query: 91  CGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           CG F S+ LINP++FKRL  +DCLVN+G P++ G TISFQYA TF++PLSVSS  C
Sbjct: 123 CGWFSSARLINPKVFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSSVVC 178

[Close]

BLAST of MELO3C014490 vs. TrEMBL
Match: A0A151S4K7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_028555 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-25
Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 1


Query: 41  KCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFK 100
           KC  + I ISQG  + + +GIPTY V+I N C+  C I  +HL+CG F S+ LINP++FK
Sbjct: 70  KCSKSDIVISQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSARLINPKVFK 129

Query: 101 RLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           RL  +DCLVN+G P++ G TISFQYA TF++PLSVSS  C
Sbjct: 130 RLRYNDCLVNDGKPLINGATISFQYANTFLYPLSVSSVAC 169

[Close]

BLAST of MELO3C014490 vs. TrEMBL
Match: G7J3D3_MEDTR (Tapetum determinant protein OS=Medicago truncatula GN=MTR_3g098960 PE=4 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.2e-25
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 1


Query: 39  EKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQI 98
           +KKC  + I I+QG  + + +GIPTY V+I N C+  C I  +HL+CG F S+ LINP++
Sbjct: 88  DKKCSKSDIVINQGSTAPLPSGIPTYTVEIMNMCVSGCDISAIHLRCGWFSSARLINPKL 147

Query: 99  FKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           FKRL  +DCLVN+G P+V G T+SFQYA T+++PLSVSS  C
Sbjct: 148 FKRLRYNDCLVNDGRPLVNGGTVSFQYANTYLYPLSVSSVVC 189

[Close]

BLAST of MELO3C014490 vs. TAIR10
Match: AT4G24972.1 (AT4G24972.1 tapetum determinant 1)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1


Query: 32  STEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSS 91
           S E   + +KC+   I ++Q     M NGIP Y V+ITNQC+  C I  +H+ CG F S+
Sbjct: 67  SVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSA 126

Query: 92  NLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
            LINP++FKR+  DDCLVNNG P+ +G T+SF YA TF + LSV+   C
Sbjct: 127 KLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of MELO3C014490 vs. TAIR10
Match: AT1G32583.1 (AT1G32583.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 112.5 bits (280), Expect = 2.2e-25
Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1


Query: 25  LLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLK 84
           LLLS  I      + + C  + I + QG  + + +G+P+Y V+I N C+  C I ++H+ 
Sbjct: 63  LLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVS 122

Query: 85  CGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           CG F S  L+NP++F+RL  DDCLVN+G P+  G+++SFQYA +F +PLSV+S  C
Sbjct: 123 CGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of MELO3C014490 vs. TAIR10
Match: AT1G05835.1 (AT1G05835.1 PHD finger protein)

HSP 1 Score: 53.9 bits (128), Expect = 9.2e-08
Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 1


Query: 42  CEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKR 101
           CEG S   +  Q    +     +RV++ N+C   C I +L LKC  F  S L++P   + 
Sbjct: 26  CEGKSSEPAVRQTQVKWREGKKFRVEVMNKC-PMCPIINLRLKCQGFPQS-LVDPTFLRV 85

Query: 102 LT--VDDCLVNNGSPIVYGETISFQYATTFMF---PLSVSSFKC 141
           L+    +C+VN+G P+   +T+SF Y+ T  F   PLS  SF+C
Sbjct: 86  LSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLS-WSFQC 126

[Close]

BLAST of MELO3C014490 vs. NCBI nr
Match: gi|729326719|ref|XP_010535235.1| (PREDICTED: uncharacterized protein At1g05835-like [Tarenaya hassleriana])

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-28
Identity = 64/126 (50.79%), Postives = 88/126 (69.84%), Query Frame = 1


Query: 17  SLLLFFHLLLLSSFISTEGGTLEK--KCEGNSIAISQGQESRMFNGIPTYRVQITNQCLD 76
           S++L F + +   F +  G  +E   +C  N+I ISQ     + NGIPT+RV+ITNQC+ 
Sbjct: 3   SVVLCFLIAIPVVFSTGAGKVMEGGGRCRKNNIVISQESTQPLPNGIPTFRVEITNQCVT 62

Query: 77  KCTIYDLHLKCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLS 136
            C+I D+HL CG F S+ LI P +FKRL+ +DCLVN G P+ +G T+SFQYAT+F+FPLS
Sbjct: 63  GCSISDIHLNCGWFSSATLIRPNVFKRLSYNDCLVNGGQPLEFGHTVSFQYATSFLFPLS 122

Query: 137 VSSFKC 141
           VSS +C
Sbjct: 123 VSSVQC 128

[Close]

BLAST of MELO3C014490 vs. NCBI nr
Match: gi|1000984729|ref|XP_015579392.1| (PREDICTED: protein TAPETUM DETERMINANT 1-like [Ricinus communis])

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           + C    I I+QG  + + NGIPTY VQITN C+  C I  +H++CG F S+ LINP+IF
Sbjct: 76  ESCTSADIVINQGSTTSLPNGIPTYTVQITNICVTGCDISGIHIRCGWFSSARLINPKIF 135

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           KRL  DDCLVNNG P++YG TISF+Y+ T+++PLSVSS  C
Sbjct: 136 KRLRYDDCLVNNGKPLIYGGTISFEYSNTYLYPLSVSSVLC 176

[Close]

BLAST of MELO3C014490 vs. NCBI nr
Match: gi|567219464|ref|XP_006413361.1| (hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum])

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-26
Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 1


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC+G+ I ++Q     M NGIP YRV+ITNQC+  C I  +H+ CG F S+ LINP++F
Sbjct: 14  EKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRLF 73

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           KR+  DDCLVNNG P+ YG T+SFQYA TF +PLSVS   C
Sbjct: 74  KRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 114

[Close]

BLAST of MELO3C014490 vs. NCBI nr
Match: gi|449472127|ref|XP_004153503.1| (PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 4.1e-26
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP++F
Sbjct: 81  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVF 140

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           KRL  DDCLVN+G P+VYG T+SFQYA T+ +PLSVSS  C
Sbjct: 141 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

[Close]

BLAST of MELO3C014490 vs. NCBI nr
Match: gi|659067542|ref|XP_008439976.1| (PREDICTED: uncharacterized protein LOC103484600 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 4.1e-26
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP++F
Sbjct: 81  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVF 140

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           KRL  DDCLVN+G P+VYG T+SFQYA T+ +PLSVSS  C
Sbjct: 141 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

The following BLAST results are available for this feature:

BLAST of MELO3C014490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TPD1_ARATH	2.1e-25	48.62	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1	[more]
TDL1_ARATH	3.9e-24	43.10	TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1	[more]
TDL1A_ORYSJ	4.9e-19	37.50	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1	[more]
TDL1B_ORYSJ	8.4e-19	34.78	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1	[more]
Y1583_ARATH	1.6e-06	35.58	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1	[more]

BLAST of MELO3C014490 vs. TrEMBL


Match Name	E-value	Identity	Description
V4MEA8_EUTSA	1.7e-26	56.44	Uncharacterized protein (Fragment) OS=Eutrema salsugineum GN=EUTSA_v10027160mg P...	[more]
A0A0A0LUG9_CUCSA	2.9e-26	55.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051700 PE=4 SV=1	[more]
V7AW39_PHAVU	1.9e-25	50.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G162500g PE=4 SV=1	[more]
A0A151S4K7_CAJCA	1.9e-25	56.00	Uncharacterized protein OS=Cajanus cajan GN=KK1_028555 PE=4 SV=1	[more]
G7J3D3_MEDTR	4.2e-25	53.92	Tapetum determinant protein OS=Medicago truncatula GN=MTR_3g098960 PE=4 SV=2	[more]

BLAST of MELO3C014490 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24972.1	1.2e-26	48.62	tapetum determinant 1	[more]
AT1G32583.1	2.2e-25	43.10	FUNCTIONS IN: molecular_function unknown	[more]
AT1G05835.1	9.2e-08	35.58	PHD finger protein	[more]

BLAST of MELO3C014490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|729326719\|ref\|XP_010535235.1\|	4.4e-28	50.79	PREDICTED: uncharacterized protein At1g05835-like [Tarenaya hassleriana]	[more]
gi\|1000984729\|ref\|XP_015579392.1\|	1.9e-26	56.44	PREDICTED: protein TAPETUM DETERMINANT 1-like [Ricinus communis]	[more]
gi\|567219464\|ref\|XP_006413361.1\|	2.4e-26	56.44	hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum]	[more]
gi\|449472127\|ref\|XP_004153503.1\|	4.1e-26	55.45	PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis sativus]	[more]
gi\|659067542\|ref\|XP_008439976.1\|	4.1e-26	55.45	PREDICTED: uncharacterized protein LOC103484600 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014490T1	MELO3C014490T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 41..140 score: 1.2
None	No IPR available	PANTHER	PTHR33184:SF2	TPD1	coord: 41..140 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014490	Cucumber (Chinese Long) v3	cucmeB503
MELO3C014490	Watermelon (97103) v2	mewmbB390
MELO3C014490	Watermelon (97103) v2	mewmbB378
MELO3C014490	Wax gourd	mewgoB449
MELO3C014490	Wax gourd	mewgoB482
MELO3C014490	Cucumber (Gy14) v1	cgymeB333
MELO3C014490	Cucurbita maxima (Rimu)	cmameB340
MELO3C014490	Cucurbita maxima (Rimu)	cmameB848
MELO3C014490	Cucurbita moschata (Rifu)	cmomeB333
MELO3C014490	Cucurbita moschata (Rifu)	cmomeB831
MELO3C014490	Wild cucumber (PI 183967)	cpimeB493
MELO3C014490	Cucumber (Chinese Long) v2	cumeB491
MELO3C014490	Watermelon (Charleston Gray)	mewcgB390
MELO3C014490	Watermelon (97103) v1	mewmB420
MELO3C014490	Watermelon (97103) v1	mewmB432
MELO3C014490	Cucurbita pepo (Zucchini)	cpemeB139
MELO3C014490	Cucurbita pepo (Zucchini)	cpemeB312
MELO3C014490	Bottle gourd (USVL1VR-Ls)	lsimeB027
MELO3C014490	Bottle gourd (USVL1VR-Ls)	lsimeB073
MELO3C014490	Cucumber (Gy14) v2	cgybmeB432
MELO3C014490	Silver-seed gourd	carmeB0071
MELO3C014490	Silver-seed gourd	carmeB0331