MELO3C014276 (gene) Melon (DHL92) v3.5.1

NameMELO3C014276
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSWIb domain-containing protein
Locationchr5 : 4399094 .. 4399570 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCATATAGAGAGAGCATAGCAGCGTGCATTTCGGCAGTGTCTCTCGGGCGGTTGGGTCACGTTCTTCGGGCAGAGGCAGCGACTTTTTTGACAGTTACGGCGACGGGCAGCGACGGCGTGTGTTGGGTTCCGACGGGTTTGGTTCAATTTCGTCATTGAGTGTTAATCCATGTTTGGGTCTTGTTTCTGGGATATTTTTGAAGCTTTCTATTCTCAGATTTAGAGGTATATTTCAGCATGTGTGTCTCTCATATTCTTGGTGTTTGGTTGATGGTATAGTCGGGTTGTAGTGATTAATTACAGATCGTTGGTATAGTCGGGTTGTAGTGATTAATTACAAATTGATTTCTGTAACTATTCCTTGAACTTGCTTTTAATAAAATCCTTTAAAGCTGATTCCCAAAGTAGATGTTCGACCATAATTGATCGAACTACTATATATCTTTGCTTCTTTATTGCTCTGTGGATTTTGCATTCGGTGTATTTTGGATTATTGCATCTGATTTAGTGCAGAAATCATAACAATATTTTCAAAACTTCAATCATCACCTGAGTAAACAATCTTTTATGTATGTTACCAGTGGAGGAACAAACTAGTTGTGCACAAAAATGACGATACGACGGATGAAGATGGCCATGACAGATAACCCAAAGAAGCTCGCAAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAATTTCTCGTCTTGGCTGTTTCAAGTGTGTGTGGTCATATATTAAAACCAACAACCTTCAGGTTCTTTTTTTTTTTTTTTTTCTCTTTTTTTTTTTATGGATTTTTTTTATCAGTATATGATTATGCTGCTATCAACCTGACAGTGACCTCTCTTGTTTAATCAACTTTCAAAATATTTAGTCTAGATTCTACATTTTATGGAGAAAAGGAAAAGAGCAATCAAATAGGAGAAGAAGGATCATAAGTTTGAAGGCTCAGGATGTAAGAAAAAATCTTCTGAAATGAAAGTCAAGAGAAACTAATGGAGGGTGGTTCAAGACAAAGTACACTTTAATAAAAGTTAAAACTATCTTCGGAGGTTACAGAGAGTCTGATAGAAGTAGAACCCAAATAGAACAAGAATGATATTGAAACGTGAAAGAGAATAGTTACATGGTAACTTTTAAGCAGTCAAGGGACTTGGAAGAGTCTGGAAGGTTGTACCTAATGAGTCGAAAACCATCTGAGCAATTCTCTACTTTCATCCTTTAGCACTCGGATTAATCCCCCCAACATTATACTCTAATAATATTTCTTACTAATACTGTTGCATTCCTAATGAAGAAGAGATGCTATCAACAGTTTTCCAACCATAGGATCACAAAAGGAATGTGATCTTGATTTATTACCCAAGGGAAGTCTTAAGTAGGTCACAGGCAACATAGGAACTCACTACCTACACCATATGTCCCTATCTCTCAAGCTTGACTGGCTTACTACAGATTAATTGTAAATGAGTAAGATGGATGATTTTTTGTCTCTCCCAGTAAGCTATCCTTCTACTAAACCGTTATCCATTCCTCTCAAATTAAGTCTGTTAAGCGCATTCACAACCACCCCAAAAGAGAATGATACTTGATTTTACTTGAAAATTCAATAGCTTTTGGTTTCTACTCCAGGTACATTTTAGGACTCCTGACTTTTCCAATGTTTTATGAAATGATCTTAGGAAGTTTGAAGTACTTGAAACTTTAATAAAGGAGCATCTATATATATCATATATATATTTTCTTATATTAGTTAGTGTTGTAAATATGTTTCTGCTGTGCCATCACTGGGTTTCTTTATTCAAATAAAATGTTATTAATATGTATATTTGCTATTTAGGATCCCACCAACAAGAATGTGGTCGTTTGTGATGAGAAGTTAAAAAGTATATTGCTAGGCAAGCCCAAGGTTGAACTAGCCGAACTTCCTGCACTGATTAAATTACATTTCCCCAAAAATCCCAAGTGAGCTATGCTTGCAGTTTAGCCTCTGGCAGCTCGGAATGAGGTCTTCAAGTCAGTCGCCAATGGTTAGAATGTTTAGCCTCAATTTTGTATAATTGTCCTACTAGGTTTTTTTTTACTATGTGTTAAAATAAACCTTCAACGCTACTTTTGTCATTGTAATTTTGGTTCATATACTTTTAAGAAAGATTTAGAGAAAATACTTAGTATCACTAGTAAATTTTACTAATGTCCTAAAATTAAATTTATTTCTTGATTAGGTTTTTCTATATTTTTAGGACAATTATATATTTTTAGGACAATTATAACCTTATCGTAATTATTAATTATATATAATTTTCAAAATTGAATACAAAATATTTTCTT

mRNA sequence

AGCATATAGAGAGAGCATAGCAGCGTGCATTTCGGCAGTGTCTCTCGGGCGGTTGGGTCACGTTCTTCGGGCAGAGGCAGCGACTTTTTTGACAGTTACGGCGACGGGCAGCGACGGCGTGTGTTGGGTTCCGACGGGTTTGGTTCAATTTCGTCATTGAGTGTTAATCCATGTTTGGGTCTTGTTTCTGGGATATTTTTGAAGCTTTCTATTCTCAGATTTAGAGTGGAGGAACAAACTAGTTGTGCACAAAAATGACGATACGACGGATGAAGATGGCCATGACAGATAACCCAAAGAAGCTCGCAAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAATTTCTCGTCTTGGCTGTTTCAAGTGTGTGTGGTCATATATTAAAACCAACAACCTTCAGGATCCCACCAACAAGAATGTGGTCGTTTGTGATGAGAAGTTAAAAAGTATATTGCTAGGCAAGCCCAAGGTTGAACTAGCCGAACTTCCTGCACTGATTAAATTACATTTCCCCAAAAATCCCAAGTGAGCTATGCTTGCAGTTTAGCCTCTGGCAGCTCGGAATGAGGTCTTCAAGTCAGTCGCCAATGGTTAGAATGTTTAGCCTCAATTTTGTATAATTGTCCTACTAGGTTTTTTTTTACTATGTGTTAAAATAAACCTTCAACGCTACTTTTGTCATTGTAATTTTGGTTCATATACTTTTAAGAAAGATTTAGAGAAAATACTTAGTATCACTAGTAAATTTTACTAATGTCCTAAAATTAAATTTATTTCTTGATTAGGTTTTTCTATATTTTTAGGACAATTATATATTTTTAGGACAATTATAACCTTATCGTAATTATTAATTATATATAATTTTCAAAATTGAATACAAAATATTTTCTT

Coding sequence (CDS)

ATGACGATACGACGGATGAAGATGGCCATGACAGATAACCCAAAGAAGCTCGCAAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAATTTCTCGTCTTGGCTGTTTCAAGTGTGTGTGGTCATATATTAAAACCAACAACCTTCAGGATCCCACCAACAAGAATGTGGTCGTTTGTGATGAGAAGTTAAAAAGTATATTGCTAGGCAAGCCCAAGGTTGAACTAGCCGAACTTCCTGCACTGATTAAATTACATTTCCCCAAAAATCCCAAGTGA
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47535melon EST collection version 4.0transcribed_cluster
MU59770melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014276T2MELO3C014276T2mRNA
MELO3C014276T1MELO3C014276T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47535MU47535transcribed_cluster
MU59770MU59770transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C014276Silver-seed gourdcarmeB0234
MELO3C014276Silver-seed gourdcarmeB0239
MELO3C014276Silver-seed gourdcarmeB0330
MELO3C014276Silver-seed gourdcarmeB0940
MELO3C014276Cucumber (Chinese Long) v3cucmeB139
MELO3C014276Cucumber (Chinese Long) v3cucmeB145
MELO3C014276Cucumber (Chinese Long) v3cucmeB233
MELO3C014276Watermelon (97103) v2mewmbB389
MELO3C014276Watermelon (97103) v2mewmbB385
MELO3C014276Watermelon (97103) v2mewmbB406
MELO3C014276Wax gourdmewgoB447
MELO3C014276Wax gourdmewgoB469
MELO3C014276Melon (DHL92) v3.5.1memeB148
MELO3C014276Cucumber (Gy14) v1cgymeB435
MELO3C014276Cucumber (Gy14) v1cgymeB634
MELO3C014276Cucurbita maxima (Rimu)cmameB235
MELO3C014276Cucurbita maxima (Rimu)cmameB339
MELO3C014276Cucurbita maxima (Rimu)cmameB762
MELO3C014276Cucurbita maxima (Rimu)cmameB846
MELO3C014276Cucurbita moschata (Rifu)cmomeB222
MELO3C014276Cucurbita moschata (Rifu)cmomeB332
MELO3C014276Cucurbita moschata (Rifu)cmomeB753
MELO3C014276Cucurbita moschata (Rifu)cmomeB829
MELO3C014276Wild cucumber (PI 183967)cpimeB143
MELO3C014276Wild cucumber (PI 183967)cpimeB227
MELO3C014276Cucumber (Chinese Long) v2cumeB138
MELO3C014276Cucumber (Chinese Long) v2cumeB141
MELO3C014276Cucumber (Chinese Long) v2cumeB233
MELO3C014276Watermelon (Charleston Gray)mewcgB386
MELO3C014276Watermelon (Charleston Gray)mewcgB389
MELO3C014276Watermelon (Charleston Gray)mewcgB403
MELO3C014276Watermelon (97103) v1mewmB414
MELO3C014276Watermelon (97103) v1mewmB431
MELO3C014276Cucurbita pepo (Zucchini)cpemeB138
MELO3C014276Cucurbita pepo (Zucchini)cpemeB239
MELO3C014276Cucurbita pepo (Zucchini)cpemeB311
MELO3C014276Cucurbita pepo (Zucchini)cpemeB579
MELO3C014276Cucurbita pepo (Zucchini)cpemeB805
MELO3C014276Bottle gourd (USVL1VR-Ls)lsimeB026
MELO3C014276Bottle gourd (USVL1VR-Ls)lsimeB363
MELO3C014276Bottle gourd (USVL1VR-Ls)lsimeB365
MELO3C014276Cucumber (Gy14) v2cgybmeB123
MELO3C014276Cucumber (Gy14) v2cgybmeB118
MELO3C014276Cucumber (Gy14) v2cgybmeB196