MELO3C014256 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014256
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionWD repeat and FYVE domain-containing protein 3
Locationchr5 : 4789866 .. 4792208 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATAAAAGAATTCTTGTAAAAAATTCCTTGCCCATATTTGAGATCTTCTCTGTCATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTCCTTGCTACCCCTTCAATGGCTTCTTCTGAAGGTATTATATATTCATGACGATATTTTAAATTAGAATAATGAATTTGAAATATATTGAATTTTGTTGTGTAGGTGGATCATCTGAATATAATAATGGTGGGATAGATGATGATGATTCATCGTCATCATCAAGAAGATATGATAGTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCGTCTCATCATATTTCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATCATTCATCATCATCATCATCAACTTCTTCAACCCAAACAGCAAACTAATTCTCTCAATCCTACTCCTCCATAACCCACACAATAAATAAAGGTTCTTTCTTTTTTTCTTTTTTCTTTTTTTTTCCCCTTTCCCAGCTTGGTTTTTTTCCTCCATTTATTAGCTTAGCTAGGAATGGTTTCTCAATTTAAAATAATAATAATAATAACAAATAATAATAATAATGTTTTTGGTTTTTGAAAAAGTATTAAGAGTTTGGTGAATTCTTGTGCCTTTCTTTATTTTTGTTATTAAAAATAATTGCAAAAGTGGTATAACCCATTTGACCTATGGATGTGTTACTACGGTTGGATAGGAATGAACATGATAGACCGAAGTCAATCGAACCAAAGATAAAAAAAATGTTTGGTTGGTGTCGGTTTAATAATCTAAACTGGTAACTTTTAAAAAAAAAAGTTTAAGGATTTATTCAATCTAAATCGACTGCTCGGCTGAAGATCAACGATATTTTGTATTTTTCGTGATCAGGATCGATTTGAAAATTTGGAAACATGCAATAAAATCAAAGCTTTTTTCTTTCCATTGTAAGTGTTATTATTTTATTAGTTTCAAATATACCTATAGAATCATTTTTAAAGACAGCAAAATGAATCAAACCGACATTTGTAGAATATAACAAAATACCATTTATATCAATGATAAATATTGATACGCTTCTTTCAGTTGCTATCATAATGCATTGATAGATATTTATAGAAGATTATCGCATCTTTACTATCTATAATTAATATTTGATATAATCTGAATTTTTTTTATTATATTTTTTAAATATTTTCGATAGTTTTTTTCGTTTACAATAATTTTTTCGAATATATATTATATTAAAAACATACTTTCATGTAAAAAAAATTAAGAAAATAAAGAGGAAGTTAAACAAACAAACATTTTCTTACTTTCTAAATAAAAAGGAAAAAAGACAAAAAAAAAAAAAAAAAAAAGAAAATGTAAAGGTTAGTAAATCTTTAAATATAAATCTAACCATAATATTATGGGTCGAGAAATATGTCTTTATCAAAATTTAATTAAGGTTTCCTTCTGAGATCAACAATGCATCGGAAGATTTTCAACCTCAAGTCTTAAAAGATGCAATAAAATATGTCATTTCAATGTAATTAATTGATGAAGTTATTACGTAGCAATAGAATAATTATTTTAAACCACAAAACTTTAAAAAGAAAAAAAAAATTATTTGTTTGTATAACAATTATGTGAATAGAGGAATGAAAGGTTGATAATATCATTATTATTTTCCACACAAAAATATGTGACCATAGATAGATAATTACCACATCAACAACAATTAGCAAGAAGTAGATAAGACAAAATAGTTAGTCATCAACTTAATTTTTTTTTTTAACTAAAAATGAAAAATGAAATTATATATGATATATTTTATTAGTTGTTAAATTTTACAGATCATCCAGCTTAATCAGTCTATAATCTTGGATAAAATTGATTAGTAAGGATTAAGTTTTTCTTAAAAAAAAATTTGTTTAATTTAATGAGTATTTACTTCACACTGCATAATAAAATAAAAGATGATGTTTATATTTAGTTTTCCAATTATTGTGTTTACTTGTGCAGGGAATCAAAGTGGGTGAATGGTTAAAGAAGTCTGGGAATTAAAGCAATGTTTCAATCTGTTTAAAAATTAAATCAAATTTAATGAACTTAGAGATATATCTTCTTTGTGTTTTCTTAATTATAATTTTGTACATCACTCACAATAAAATGTATGTCGTGTGTGCAACTCAATGTTGTTAAGTTTATAAGCACTTTAGAGAAATCGACTTATTCTGTCACGTAATACATTATTTTAATTCGTGGTGTTTTTATGCCAAGTTAGAATTGAGATGCTATGTAAAATTTTTCATATTATTATCATAGCATTAAATATTTTTCTCGAGGTAACTCAATTCT

mRNA sequence

ATATAAAAGAATTCTTGTAAAAAATTCCTTGCCCATATTTGAGATCTTCTCTGTCATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTCCTTGCTACCCCTTCAATGGCTTCTTCTGAAGGTGGATCATCTGAATATAATAATGGTGGGATAGATGATGATGATTCATCGTCATCATCAAGAAGATATGATAGTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCGTCTCATCATATTTCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATCATTCATCATCATCATCATCAACTTCTTCAACCCAAACAGCAAACTAATTCTCTCAATCCTACTCCTCCATAACCCACACAATAAATAAAGGGAATCAAAGTGGGTGAATGGTTAAAGAAGTCTGGGAATTAAAGCAATGTTTCAATCTGTTTAAAAATTAAATCAAATTTAATGAACTTAGAGATATATCTTCTTTGTGTTTTCTTAATTATAATTTTGTACATCACTCACAATAAAATGTATGTCGTGTGTGCAACTCAATGTTGTTAAGTTTATAAGCACTTTAGAGAAATCGACTTATTCTGTCACGTAATACATTATTTTAATTCGTGGTGTTTTTATGCCAAGTTAGAATTGAGATGCTATGTAAAATTTTTCATATTATTATCATAGCATTAAATATTTTTCTCGAGGTAACTCAATTCT

Coding sequence (CDS)

ATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTCCTTGCTACCCCTTCAATGGCTTCTTCTGAAGGTGGATCATCTGAATATAATAATGGTGGGATAGATGATGATGATTCATCGTCATCATCAAGAAGATATGATAGTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCGTCTCATCATATTTCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATCATTCATCATCATCATCATCAACTTCTTCAACCCAAACAGCAAACTAATTCTCTCAATCCTACTCCTCCATAA

Protein sequence

MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP*
Homology
[Close]
BLAST of MELO3C014256 vs. TrEMBL
Match: A0A0A0KIB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G444970 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-35
Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 1   MEIVNFMTTMFFLFLLA-TPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
           MEIVNFMTTMFFLFLLA TPS++SS+G +SE +NGGIDD            VYEIDYRGP
Sbjct: 1   MEIVNFMTTMFFLFLLAATPSLSSSKGRASENSNGGIDD-----------IVYEIDYRGP 60

Query: 61  ETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTP 103
           ETHSSHHISPPDHSHGRRPWIIHHH HQLLQPK Q NSL+PTP
Sbjct: 61  ETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPK-QPNSLDPTP 91

[Close]
BLAST of MELO3C014256 vs. TrEMBL
Match: W9S7U8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024428 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-08
Identity = 38/80 (47.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 1  MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60
          ME+ +  TT+FFLFL A P  +  E   +  +N                 VYEIDYRGPE
Sbjct: 1  MELKSCFTTIFFLFLFAAPYFSRGEYSDALDSN----------------EVYEIDYRGPE 60

Query: 61 THSSHHISPPDHSHGRRPWI 81
          THSS  I PPDHSHG +PWI
Sbjct: 61 THSS--IPPPDHSHG-KPWI 61

[Close]
BLAST of MELO3C014256 vs. TrEMBL
Match: V4SN08_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013224mg PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-07
Identity = 44/100 (44.00%), Postives = 52/100 (52.00%), Query Frame = 1 

Query: 1   MEIVNFMTTMFFLFLL-ATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
           ME+ + +TT F LFLL ATP  +           GG+ + DS         VYEIDYRGP
Sbjct: 1   MELKSSITTFFLLFLLFATPFCSL----------GGLPELDSE--------VYEIDYRGP 60

Query: 61  ETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLN 100
           ETHSS  I PPDHSHGR   +I H    L    + T   N
Sbjct: 61  ETHSS--IPPPDHSHGRGKPVIRHESAVLPPESKATGRKN 80

[Close]
BLAST of MELO3C014256 vs. TrEMBL
Match: A0A067D620_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034723mg PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-07
Identity = 41/84 (48.81%), Postives = 48/84 (57.14%), Query Frame = 1 

Query: 1  MEIVNFMTTMFFLFLL-ATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
          ME+ + +TT F LFLL ATP  +           GG+ + DS         VYEIDYRGP
Sbjct: 1  MELKSSITTFFLLFLLFATPFCSL----------GGLPELDSE--------VYEIDYRGP 60

Query: 61 ETHSSHHISPPDHSHGRRPWIIHH 84
          ETHSS  I PPDHSHGR   +I H
Sbjct: 61 ETHSS--IPPPDHSHGRGKPVIRH 64

[Close]
BLAST of MELO3C014256 vs. NCBI nr
Match: gi|659096763|ref|XP_008449275.1| (PREDICTED: uncharacterized protein LOC103491202 [Cucumis melo])

HSP 1 Score: 223.0 bits (567), Expect = 2.4e-55
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60
           MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE
Sbjct: 25  MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 84

Query: 61  THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP 104
           THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP
Sbjct: 85  THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP 127

[Close]
BLAST of MELO3C014256 vs. NCBI nr
Match: gi|700192928|gb|KGN48132.1| (hypothetical protein Csa_6G444970 [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 2.8e-35
Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 1   MEIVNFMTTMFFLFLLA-TPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
           MEIVNFMTTMFFLFLLA TPS++SS+G +SE +NGGIDD            VYEIDYRGP
Sbjct: 1   MEIVNFMTTMFFLFLLAATPSLSSSKGRASENSNGGIDD-----------IVYEIDYRGP 60

Query: 61  ETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTP 103
           ETHSSHHISPPDHSHGRRPWIIHHH HQLLQPK Q NSL+PTP
Sbjct: 61  ETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPK-QPNSLDPTP 91

[Close]
BLAST of MELO3C014256 vs. NCBI nr
Match: gi|703141717|ref|XP_010107572.1| (hypothetical protein L484_024428 [Morus notabilis])

HSP 1 Score: 65.1 bits (157), Expect = 8.4e-08
Identity = 38/80 (47.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 1  MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60
          ME+ +  TT+FFLFL A P  +  E   +  +N                 VYEIDYRGPE
Sbjct: 1  MELKSCFTTIFFLFLFAAPYFSRGEYSDALDSN----------------EVYEIDYRGPE 60

Query: 61 THSSHHISPPDHSHGRRPWI 81
          THSS  I PPDHSHG +PWI
Sbjct: 61 THSS--IPPPDHSHG-KPWI 61

[Close]
BLAST of MELO3C014256 vs. NCBI nr
Match: gi|567872485|ref|XP_006428832.1| (hypothetical protein CICLE_v10013224mg [Citrus clementina])

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07
Identity = 44/100 (44.00%), Postives = 52/100 (52.00%), Query Frame = 1 

Query: 1   MEIVNFMTTMFFLFLL-ATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
           ME+ + +TT F LFLL ATP  +           GG+ + DS         VYEIDYRGP
Sbjct: 1   MELKSSITTFFLLFLLFATPFCSL----------GGLPELDSE--------VYEIDYRGP 60

Query: 61  ETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLN 100
           ETHSS  I PPDHSHGR   +I H    L    + T   N
Sbjct: 61  ETHSS--IPPPDHSHGRGKPVIRHESAVLPPESKATGRKN 80

[Close]
BLAST of MELO3C014256 vs. NCBI nr
Match: gi|641810691|gb|KDO36990.1| (hypothetical protein CISIN_1g034723mg [Citrus sinensis])

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-07
Identity = 41/84 (48.81%), Postives = 48/84 (57.14%), Query Frame = 1 

Query: 1  MEIVNFMTTMFFLFLL-ATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
          ME+ + +TT F LFLL ATP  +           GG+ + DS         VYEIDYRGP
Sbjct: 1  MELKSSITTFFLLFLLFATPFCSL----------GGLPELDSE--------VYEIDYRGP 60

Query: 61 ETHSSHHISPPDHSHGRRPWIIHH 84
          ETHSS  I PPDHSHGR   +I H
Sbjct: 61 ETHSS--IPPPDHSHGRGKPVIRH 64

The following BLAST results are available for this feature:
BLAST of MELO3C014256 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIB6_CUCSA1.9e-3576.70Uncharacterized protein OS=Cucumis sativus GN=Csa_6G444970 PE=4 SV=1[more]
W9S7U8_9ROSA5.8e-0847.50Uncharacterized protein OS=Morus notabilis GN=L484_024428 PE=4 SV=1[more]
V4SN08_9ROSI1.7e-0744.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013224mg PE=4 SV=1[more]
A0A067D620_CITSI2.9e-0748.81Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034723mg PE=4 SV=1[more]
BLAST of MELO3C014256 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096763|ref|XP_008449275.1|2.4e-55100.00PREDICTED: uncharacterized protein LOC103491202 [Cucumis melo][more]
gi|700192928|gb|KGN48132.1|2.8e-3576.70hypothetical protein Csa_6G444970 [Cucumis sativus][more]
gi|703141717|ref|XP_010107572.1|8.4e-0847.50hypothetical protein L484_024428 [Morus notabilis][more]
gi|567872485|ref|XP_006428832.1|2.4e-0744.00hypothetical protein CICLE_v10013224mg [Citrus clementina][more]
gi|641810691|gb|KDO36990.1|4.2e-0748.81hypothetical protein CISIN_1g034723mg [Citrus sinensis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU59364melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014256T1MELO3C014256T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU59364MU59364transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C014256Csa6G444970Cucumber (Chinese Long) v2cumeB490
MELO3C014256Carg15282Silver-seed gourdcarmeB0553
MELO3C014256CsaV3_6G039370Cucumber (Chinese Long) v3cucmeB502
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C014256Watermelon (Charleston Gray)mewcgB366
MELO3C014256Watermelon (Charleston Gray)mewcgB383
MELO3C014256Watermelon (97103) v1mewmB399
MELO3C014256Watermelon (97103) v1mewmB417
MELO3C014256Cucurbita pepo (Zucchini)cpemeB057
MELO3C014256Cucurbita pepo (Zucchini)cpemeB446
MELO3C014256Cucurbita pepo (Zucchini)cpemeB580
MELO3C014256Cucurbita pepo (Zucchini)cpemeB807
MELO3C014256Bottle gourd (USVL1VR-Ls)lsimeB145
MELO3C014256Bottle gourd (USVL1VR-Ls)lsimeB266
MELO3C014256Cucumber (Gy14) v2cgybmeB194
MELO3C014256Silver-seed gourdcarmeB0164
MELO3C014256Silver-seed gourdcarmeB0426
MELO3C014256Cucumber (Chinese Long) v3cucmeB229
MELO3C014256Watermelon (97103) v2mewmbB368
MELO3C014256Watermelon (97103) v2mewmbB382
MELO3C014256Wax gourdmewgoB444
MELO3C014256Wax gourdmewgoB485
MELO3C014256Melon (DHL92) v3.5.1memeB137
MELO3C014256Cucumber (Gy14) v1cgymeB192
MELO3C014256Cucumber (Gy14) v1cgymeB505
MELO3C014256Cucurbita maxima (Rimu)cmameB236
MELO3C014256Cucurbita maxima (Rimu)cmameB605
MELO3C014256Cucurbita maxima (Rimu)cmameB759
MELO3C014256Cucurbita maxima (Rimu)cmameB793
MELO3C014256Cucurbita moschata (Rifu)cmomeB223
MELO3C014256Cucurbita moschata (Rifu)cmomeB594
MELO3C014256Cucurbita moschata (Rifu)cmomeB751
MELO3C014256Cucurbita moschata (Rifu)cmomeB779
MELO3C014256Wild cucumber (PI 183967)cpimeB225
MELO3C014256Wild cucumber (PI 183967)cpimeB492
MELO3C014256Cucumber (Chinese Long) v2cumeB232