MELO3C014042 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014042
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative MYB transcription factor
Locationchr6 : 32550751 .. 32552456 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTTCTTCTCCTTCAGCCTCTTCGATCTCATTCCTATCTCTCATCTTCTCTAATCACGCATTTTCTCCTTCTTCCCCTCTCCCTTCTTCACGCAAACACCCTTAACATTTGGTCCTTTGGTTCTCAATTTTTTTCCCCACTCGCCAGAGCAAAAATGCTATCTGGGTTTTCATAGGAACCGATCGAAATGTACTCTGCCATTCCGGCACTGCCGATGGACGACGGTGGGGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTACTCGATGATGCTTGTTTGGTTCTCACGTCGGATCTGAAGTCGCACCTCCATTGGATGGTGGAGCTTCATGAACGATACGTTGATGCTGTCACTCAACTTGACGGCCCAGACAGTGAGTTTGTTTCTTCTTCTTCTTCTTCTAATTGCTTCTTTTTAGTTCTTTATCTGAAATTTGGGCTTTTTGTGTTTGTGCAATGTTTAATGTAATGTGTTGGGATTTTTTTTCTTCTTTTTTTGCAATCTGTGTTTGTGCAAGTTGCTTGTGAAACCAACTCGGGTTGTTATCACGCTGTACAAAGCTTCAAAAGGAAACTGGTTATATTTGAATTTGAAGGAGGACAAGGTCTGTGAGTAAAGAGATGGTGATTTGACGATTTAGTTAATGTATTTAATCAACTAAATTTGTTGTTAATTTACATCTTGCAGCTCTTAGCCCTTCAAGGAGGCAATTTTCCAAAATTTTGTTTATTGTATAGGAATAGAAGCATGATTCGTTGTATGTACAATATATGTTTGTATATTCTTAGTTTGAATGGGTGTTGATTTTTAGTTTACAAGTTAATAATCTTTTTATCTATTCTTATGTGGTAGAAATGTCAAAATGCTGCACCATGCCAGCTGAATTTGAGCATCATTTTACAGACACGATCTAGGTTTGATGACCTAACTTGATTTTGATTTTGTGATCATTACTGAAAACTTCATTGTCCAATAATCGAATGACACACCTTTCAATTATTTTAGGAAATGTTCTCTATAATATTAGATTTTGCAGCTGTTTTATTATTCTATTGAAGAAAATAAACTTTCAAATCTCTTGAGCTGCTCATTGTCTAAATCTCTTGTTTGCTCTTCTGTACGATCCGTGTCAATTTTGTTGTCAATCCACTTGGTTAAACCAAACCTTATATATGGGCTTCTAGCTGTTTCAACTTAGTTTAATCATAAGGGCATATATTGAACTTGTACATGGTATTGGAAGTTGTGTTGTGGCGATTATCCTGCTGTTTAGACATTATGATAAGATTTTTGTTTAAATTCTAACTTGTGTTCTTCTCTGCAGAAAATTTTAGGGTTCTAGGCACAGATATGATGAATCTTGTATTTTTTACCTTCTACCTAATTTAGTTTTCTCATTTTCTGAACTTGCTCTAAAATTCTAAATGCAGGGGAGAAAGATAAAACTACAAGTGAAATTCAAATGGCTCACAATTTTTCATTACCACCATTAAGTCCAACTGGTACTATTTTCTATCCAAATATTATTTGATGATTTTGACCTGTTGGAAATGAGAGTATTGAATAAAATTTTTTTATTTTTTATTTTTGAAGAGTTCTTATGTTATATGCTTTGAGATCCAGATGCTTGGTCAATGCTAAATCGTCCTAGATGATGCAAAATAACTGTCACGAGTTCTTATGTTATATGCTTTGACATT

mRNA sequence

ATTCTTCTTCTCCTTCAGCCTCTTCGATCTCATTCCTATCTCTCATCTTCTCTAATCACGCATTTTCTCCTTCTTCCCCTCTCCCTTCTTCACGCAAACACCCTTAACATTTGGTCCTTTGGTTCTCAATTTTTTTCCCCACTCGCCAGAGCAAAAATGCTATCTGGGTTTTCATAGGAACCGATCGAAATGTACTCTGCCATTCCGGCACTGCCGATGGACGACGGTGGGGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTACTCGATGATGCTTGTTTGGTTCTCACGTCGGATCTGAAGTCGCACCTCCATTGGATGGTGGAGCTTCATGAACGATACGTTGATGCTGTCACTCAACTTGACGGCCCAGACAGGGAGAAAGATAAAACTACAAGTGAAATTCAAATGGCTCACAATTTTTCATTACCACCATTAAGTCCAACTGGTACTATTTTCTATCCAAATATTATTTGATGATTTTGACCTGTTGGAAATGAGAGTATTGAATAAAATTTTTTTATTTTTTATTTTTGAAGAGTTCTTATGTTATATGCTTTGAGATCCAGATGCTTGGTCAATGCTAAATCGTCCTAGATGATGCAAAATAACTGTCACGAGTTCTTATGTTATATGCTTTGACATT

Coding sequence (CDS)

ATGTACTCTGCCATTCCGGCACTGCCGATGGACGACGGTGGGGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTACTCGATGATGCTTGTTTGGTTCTCACGTCGGATCTGAAGTCGCACCTCCATTGGATGGTGGAGCTTCATGAACGATACGTTGATGCTGTCACTCAACTTGACGGCCCAGACAGGGAGAAAGATAAAACTACAAGTGAAATTCAAATGGCTCACAATTTTTCATTACCACCATTAAGTCCAACTGGTACTATTTTCTATCCAAATATTATTTGA

Protein sequence

MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLDGPDREKDKTTSEIQMAHNFSLPPLSPTGTIFYPNII*
Homology
[Close]
BLAST of MELO3C014042 vs. Swiss-Prot
Match: PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.7e-18
Identity = 46/71 (64.79%), Postives = 50/71 (70.42%), Query Frame = 1 

Query: 1  MYSAIPALPMDDG--GGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQ 60
          MYSAI +LP+D G  GG + G LDGTNL  DACLVLT+D K  L W  ELHER+VDAVTQ
Sbjct: 1  MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ 60

Query: 61 LDGPDREKDKT 70
          L GPD+   KT
Sbjct: 61 LGGPDKATPKT 71

[Close]
BLAST of MELO3C014042 vs. Swiss-Prot
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 42/70 (60.00%), Postives = 46/70 (65.71%), Query Frame = 1 

Query: 1  MYSAI-PALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQL 60
          MYSAI  +LP+D   G +    DGTNL  DACLVLT+D K  L W  ELHER+VDAVTQL
Sbjct: 1  MYSAIRSSLPLDGSLGDYS---DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQL 60

Query: 61 DGPDREKDKT 70
           GPD+   KT
Sbjct: 61 GGPDKATPKT 67

[Close]
BLAST of MELO3C014042 vs. Swiss-Prot
Match: APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-07
Identity = 27/53 (50.94%), Postives = 31/53 (58.49%), Query Frame = 1 

Query: 29 DACLVLTSDLKSHLHWMVELHERYVDAVTQLDGPDREKDKTTSEIQMAHNFSL 82
          D+ LVLT+D K  L W VELHER+VDAV QL GPD+   KT   +      +L
Sbjct: 24 DSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTL 76

[Close]
BLAST of MELO3C014042 vs. Swiss-Prot
Match: PHLC_ARATH (Myb family transcription factor PHL12 OS=Arabidopsis thaliana GN=PHL12 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 7.3e-06
Identity = 24/50 (48.00%), Postives = 28/50 (56.00%), Query Frame = 1 

Query: 32 LVLTSDLKSHLHWMVELHERYVDAVTQLDGPDREKDKTTSEIQMAHNFSL 82
          LVLT+D K  L W  ELHER+VDAVT L GP++   KT   +      +L
Sbjct: 16 LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTL 65

[Close]
BLAST of MELO3C014042 vs. TrEMBL
Match: A0A0A0L435_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G130900 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-20
Identity = 52/69 (75.36%), Postives = 54/69 (78.26%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYS I ALPMD GGGKFQGSLDGTNL  DACLVLTSD K  L W  ELHER+VDAVTQL 
Sbjct: 12 MYSTITALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLG 71

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 72 GPDKATPKT 80

[Close]
BLAST of MELO3C014042 vs. TrEMBL
Match: B9RWI5_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1019810 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.4e-17
Identity = 48/69 (69.57%), Postives = 53/69 (76.81%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYSAI +LP+D G G FQGSLDGTNL  DACLVLT+D K  L W  ELHER+VDAVTQL 
Sbjct: 1  MYSAIHSLPLD-GHGDFQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQLG 60

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 61 GPDKATPKT 68

[Close]
BLAST of MELO3C014042 vs. TrEMBL
Match: A0A0D2RN32_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G158500 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.4e-17
Identity = 46/69 (66.67%), Postives = 52/69 (75.36%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYSAI +LP+D   G +QGSLDGTNL  DACLVLT+D K  L W  ELHER+VDAVTQL 
Sbjct: 1  MYSAIRSLPLDGRVGDYQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQLG 60

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 61 GPDKATPKT 69

[Close]
BLAST of MELO3C014042 vs. TrEMBL
Match: A0A0B0PDH2_GOSAR (Myb family transcription factor APL OS=Gossypium arboreum GN=F383_29941 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.4e-17
Identity = 46/69 (66.67%), Postives = 52/69 (75.36%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYSAI +LP+D   G +QGSLDGTNL  DACLVLT+D K  L W  ELHER+VDAVTQL 
Sbjct: 1  MYSAIRSLPLDGRVGDYQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQLG 60

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 61 GPDKATPKT 69

[Close]
BLAST of MELO3C014042 vs. TrEMBL
Match: A0A0D2UUL1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G158500 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.4e-17
Identity = 46/69 (66.67%), Postives = 52/69 (75.36%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYSAI +LP+D   G +QGSLDGTNL  DACLVLT+D K  L W  ELHER+VDAVTQL 
Sbjct: 1  MYSAIRSLPLDGRVGDYQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQLG 60

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 61 GPDKATPKT 69

[Close]
BLAST of MELO3C014042 vs. TAIR10
Match: AT3G24120.2 (AT3G24120.2 Homeodomain-like superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 2.1e-19
Identity = 46/71 (64.79%), Postives = 50/71 (70.42%), Query Frame = 1 

Query: 1  MYSAIPALPMDDG--GGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQ 60
          MYSAI +LP+D G  GG + G LDGTNL  DACLVLT+D K  L W  ELHER+VDAVTQ
Sbjct: 1  MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ 60

Query: 61 LDGPDREKDKT 70
          L GPD+   KT
Sbjct: 61 LGGPDKATPKT 71

[Close]
BLAST of MELO3C014042 vs. TAIR10
Match: AT4G13640.2 (AT4G13640.2 Homeodomain-like superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-14
Identity = 42/70 (60.00%), Postives = 46/70 (65.71%), Query Frame = 1 

Query: 1  MYSAI-PALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQL 60
          MYSAI  +LP+D   G +    DGTNL  DACLVLT+D K  L W  ELHER+VDAVTQL
Sbjct: 1  MYSAIRSSLPLDGSLGDYS---DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQL 60

Query: 61 DGPDREKDKT 70
           GPD+   KT
Sbjct: 61 GGPDKATPKT 67

[Close]
BLAST of MELO3C014042 vs. TAIR10
Match: AT1G79430.2 (AT1G79430.2 Homeodomain-like superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-08
Identity = 27/53 (50.94%), Postives = 31/53 (58.49%), Query Frame = 1 

Query: 29 DACLVLTSDLKSHLHWMVELHERYVDAVTQLDGPDREKDKTTSEIQMAHNFSL 82
          D+ LVLT+D K  L W VELHER+VDAV QL GPD+   KT   +      +L
Sbjct: 24 DSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTL 76

[Close]
BLAST of MELO3C014042 vs. TAIR10
Match: AT3G12730.1 (AT3G12730.1 Homeodomain-like superfamily protein)

HSP 1 Score: 51.2 bits (121), Expect = 4.1e-07
Identity = 24/50 (48.00%), Postives = 28/50 (56.00%), Query Frame = 1 

Query: 32 LVLTSDLKSHLHWMVELHERYVDAVTQLDGPDREKDKTTSEIQMAHNFSL 82
          LVLT+D K  L W  ELHER+VDAVT L GP++   KT   +      +L
Sbjct: 16 LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTL 65

[Close]
BLAST of MELO3C014042 vs. NCBI nr
Match: gi|659096199|ref|XP_008448973.1| (PREDICTED: uncharacterized protein LOC103490983 isoform X2 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-38
Identity = 87/121 (71.90%), Postives = 88/121 (72.73%), Query Frame = 1 

Query: 1   MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
           MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD
Sbjct: 1   MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60

Query: 61  GPD-----------------------------REKDKTTSEIQMAHNFSLPPLSPTGTIF 93
           GPD                              EKDKTTSEIQMAHNFSLPPLSPT  + 
Sbjct: 61  GPDIACETNSGCYHAVQSFKRKLVIFEFEGGQGEKDKTTSEIQMAHNFSLPPLSPTEFLC 120

[Close]
BLAST of MELO3C014042 vs. NCBI nr
Match: gi|659096197|ref|XP_008448972.1| (PREDICTED: uncharacterized protein LOC103490983 isoform X1 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 7.2e-38
Identity = 86/116 (74.14%), Postives = 86/116 (74.14%), Query Frame = 1 

Query: 1   MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
           MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD
Sbjct: 1   MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60

Query: 61  GPD-----------------------------REKDKTTSEIQMAHNFSLPPLSPT 88
           GPD                              EKDKTTSEIQMAHNFSLPPLSPT
Sbjct: 61  GPDIACETNSGCYHAVQSFKRKLVIFEFEGGQGEKDKTTSEIQMAHNFSLPPLSPT 116

[Close]
BLAST of MELO3C014042 vs. NCBI nr
Match: gi|659075830|ref|XP_008438354.1| (PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 9.5e-22
Identity = 54/69 (78.26%), Postives = 56/69 (81.16%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYSAIPALPMD GGGKFQGSLDGTNL  DACLVLTSD K  L W  ELHER+VDAVTQL 
Sbjct: 12 MYSAIPALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLG 71

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 72 GPDKATPKT 80

[Close]
BLAST of MELO3C014042 vs. NCBI nr
Match: gi|659075832|ref|XP_008438355.1| (PREDICTED: myb family transcription factor APL isoform X2 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 9.5e-22
Identity = 54/69 (78.26%), Postives = 56/69 (81.16%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYSAIPALPMD GGGKFQGSLDGTNL  DACLVLTSD K  L W  ELHER+VDAVTQL 
Sbjct: 12 MYSAIPALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLG 71

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 72 GPDKATPKT 80

[Close]
BLAST of MELO3C014042 vs. NCBI nr
Match: gi|778677866|ref|XP_011650877.1| (PREDICTED: myb family transcription factor APL isoform X2 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-20
Identity = 52/69 (75.36%), Postives = 54/69 (78.26%), Query Frame = 1 

Query: 1  MYSAIPALPMDDGGGKFQGSLDGTNLLDDACLVLTSDLKSHLHWMVELHERYVDAVTQLD 60
          MYS I ALPMD GGGKFQGSLDGTNL  DACLVLTSD K  L W  ELHER+VDAVTQL 
Sbjct: 12 MYSTITALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLG 71

Query: 61 GPDREKDKT 70
          GPD+   KT
Sbjct: 72 GPDKATPKT 80

The following BLAST results are available for this feature:
BLAST of MELO3C014042 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PHL2_ARATH3.7e-1864.79Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1[more]
PHL3_ARATH2.1e-1360.00Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1[more]
APL_ARATH3.0e-0750.94Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2[more]
PHLC_ARATH7.3e-0648.00Myb family transcription factor PHL12 OS=Arabidopsis thaliana GN=PHL12 PE=2 SV=1[more]
BLAST of MELO3C014042 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L435_CUCSA1.6e-2075.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G130900 PE=4 SV=1[more]
B9RWI5_RICCO6.4e-1769.57Transcription factor, putative OS=Ricinus communis GN=RCOM_1019810 PE=4 SV=1[more]
A0A0D2RN32_GOSRA8.4e-1766.67Uncharacterized protein OS=Gossypium raimondii GN=B456_011G158500 PE=4 SV=1[more]
A0A0B0PDH2_GOSAR8.4e-1766.67Myb family transcription factor APL OS=Gossypium arboreum GN=F383_29941 PE=4 SV=... [more]
A0A0D2UUL1_GOSRA8.4e-1766.67Uncharacterized protein OS=Gossypium raimondii GN=B456_011G158500 PE=4 SV=1[more]
BLAST of MELO3C014042 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24120.22.1e-1964.79 Homeodomain-like superfamily protein[more]
AT4G13640.21.2e-1460.00 Homeodomain-like superfamily protein[more]
AT1G79430.21.7e-0850.94 Homeodomain-like superfamily protein[more]
AT3G12730.14.1e-0748.00 Homeodomain-like superfamily protein[more]
BLAST of MELO3C014042 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096199|ref|XP_008448973.1|3.3e-3871.90PREDICTED: uncharacterized protein LOC103490983 isoform X2 [Cucumis melo][more]
gi|659096197|ref|XP_008448972.1|7.2e-3874.14PREDICTED: uncharacterized protein LOC103490983 isoform X1 [Cucumis melo][more]
gi|659075830|ref|XP_008438354.1|9.5e-2278.26PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo][more]
gi|659075832|ref|XP_008438355.1|9.5e-2278.26PREDICTED: myb family transcription factor APL isoform X2 [Cucumis melo][more]
gi|778677866|ref|XP_011650877.1|2.3e-2075.36PREDICTED: myb family transcription factor APL isoform X2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU55782melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014042T1MELO3C014042T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55782MU55782transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 37..69
score: 1.
NoneNo IPR availablePANTHERPTHR31499FAMILY NOT NAMEDcoord: 22..64
score: 5.0
NoneNo IPR availablePANTHERPTHR31499:SF6MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 22..64
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C014042Wax gourdmewgoB506
MELO3C014042Cucumber (Gy14) v1cgymeB013
MELO3C014042Cucurbita maxima (Rimu)cmameB290
MELO3C014042Cucurbita maxima (Rimu)cmameB764
MELO3C014042Cucurbita moschata (Rifu)cmomeB283
MELO3C014042Cucurbita moschata (Rifu)cmomeB756
MELO3C014042Wild cucumber (PI 183967)cpimeB240
MELO3C014042Cucumber (Chinese Long) v2cumeB243
MELO3C014042Watermelon (Charleston Gray)mewcgB415
MELO3C014042Watermelon (97103) v1mewmB447
MELO3C014042Cucurbita pepo (Zucchini)cpemeB185
MELO3C014042Cucurbita pepo (Zucchini)cpemeB814
MELO3C014042Bottle gourd (USVL1VR-Ls)lsimeB446
MELO3C014042Cucumber (Gy14) v2cgybmeB209
MELO3C014042Silver-seed gourdcarmeB0015
MELO3C014042Silver-seed gourdcarmeB0856
MELO3C014042Watermelon (97103) v2mewmbB430
MELO3C014042Cucumber (Chinese Long) v3cucmeB246