MELO3C014029 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014029
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	GRAS family transcription factor
Location	chr6 : 32656806 .. 32657263 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCATCATCACCATCATCATCATCATGATATTGAAAAGATTCAATCTTGTTACTTATCATTGAATCAAATCACACCCTTTATTAGATTCACTCATTTAACTGCAAATCAAGCCATTTTAGAAGGTATTGAAGAAAGTGGTATGATTCATGTTTTGGATTTTGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCATCTCCTATGCTTCGTATTACTGCCACTGGTCTTGATCTTAATTTCCTTCATAAGACTGGTGATAGACTCTCAAAATTTGCTCAATCACTTGGTTTGAGGTTTCAGTTTCACCCTTTGCTTCTTCTTCATGATCGTGATCATCATCGCGTTATCCCTGCTGCTCTTACCCTCTTCCCCGATGAAGCTCTCGCCGTTAACTGCGTTCTCTACTTGCACAGGTACGGTATACTTTAA

mRNA sequence

CTTTTCATCATCACCATCATCATCATCATGATATTGAAAAGATTCAATCTTGTTACTTATCATTGAATCAAATCACACCCTTTATTAGATTCACTCATTTAACTGCAAATCAAGCCATTTTAGAAGGTATTGAAGAAAGTGGTATGATTCATGTTTTGGATTTTGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCATCTCCTATGCTTCGTATTACTGCCACTGGTCTTGATCTTAATTTCCTTCATAAGACTGGTGATAGACTCTCAAAATTTGCTCAATCACTTGGTTTGAGGTTTCAGTTTCACCCTTTGCTTCTTCTTCATGATCGTGATCATCATCGCGTTATCCCTGCTGCTCTTACCCTCTTCCCCGATGAAGCTCTCGCCGTTAACTGCGTTCTCTACTTGCACAGGTACGGTATACTTTAA

Coding sequence (CDS)

ATGATTCATGTTTTGGATTTTGATATTATGCATGGTGTTCAATGGCCTCCTCTTATGCAAGCTTTGGCTGATCGTTTTCCATCTCCTATGCTTCGTATTACTGCCACTGGTCTTGATCTTAATTTCCTTCATAAGACTGGTGATAGACTCTCAAAATTTGCTCAATCACTTGGTTTGAGGTTTCAGTTTCACCCTTTGCTTCTTCTTCATGATCGTGATCATCATCGCGTTATCCCTGCTGCTCTTACCCTCTTCCCCGATGAAGCTCTCGCCGTTAACTGCGTTCTCTACTTGCACAGGTACGGTATACTTTAA

Protein sequence

MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLRFQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRYGIL*

Homology

[Close]

BLAST of MELO3C014029 vs. Swiss-Prot
Match: SCL18_ARATH (Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRF-----PSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           +H+LD DI  G+QWPPLMQALA+R      P P LRIT  G D+  L++TGDRL++FA S
Sbjct: 179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLNRTGDRLTRFADS 238

Query: 62  LGLRFQFHPLLLLHDRDHHRVIP---AALTLFPDEALAVNCVLYLHR 101
           LGL+FQFH L+++ +     ++     AL+    E +AVNCV +LH+
Sbjct: 239 LGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHK 285

[Close]

BLAST of MELO3C014029 vs. Swiss-Prot
Match: MOC_ORYSJ (Protein MONOCULM 1 OS=Oryza sativa subsp. japonica GN=MOC1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17
Identity = 50/118 (42.37%), Postives = 63/118 (53.39%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADR----FPSPMLRITATGLDLNFLHKTGDRLSKFAQSL 61
           +H+LD D +HGVQWPPL+QA+A+R       P +R+T  G D + L +TG+RL  FA+S+
Sbjct: 158 VHILDLDAVHGVQWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSI 217

Query: 62  GLRFQFHPLLL--LHDRDHH--------------RVIPAALTLFPDEALAVNCVLYLH 100
            L F F PLLL       HH                    L   PDE LAVNCV++LH
Sbjct: 218 HLPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLH 275

[Close]

BLAST of MELO3C014029 vs. Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSPM-LRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +H++DFDI  G+QWP   Q+LA R   P  +RIT  G     L++TGDRL  FA+++ L+
Sbjct: 386 VHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQ 445

Query: 62  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 101
           F+FHP++   DR    V    L +   E++AVNCV+ +H+
Sbjct: 446 FEFHPVV---DR-LEDVRLWMLHVKEGESVAVNCVMQMHK 481

[Close]

BLAST of MELO3C014029 vs. Swiss-Prot
Match: NSP2_MEDTR (Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 47/103 (45.63%), Postives = 56/103 (54.37%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSPMLRITA---TGL---DLNFLHKTGDRLSKFAQ 61
           +HV+D+DIM GVQW  L+Q+LA     P LRITA   TG     +  + +TG RL+ FA 
Sbjct: 240 VHVIDYDIMEGVQWASLIQSLASNNNGPHLRITALSRTGTGRRSIATVQETGRRLTSFAA 299

Query: 62  SLGLRFQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYL 99
           SLG  F FH   L  D       P+AL L   EAL  NC+L L
Sbjct: 300 SLGQPFSFHHCRLDSDETFR---PSALKLVRGEALVFNCMLNL 339

[Close]

BLAST of MELO3C014029 vs. Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSP-MLRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +H++D DIM G+QWP L   LA R   P ++R+T  G  +  L  TG RLS FAQ LGL 
Sbjct: 528 VHIIDLDIMQGLQWPGLFHILASRPGGPPLVRLTGLGTSMEALEATGKRLSDFAQKLGLP 587

Query: 62  FQFHPL 67
           F+F P+
Sbjct: 588 FEFFPV 593

[Close]

BLAST of MELO3C014029 vs. TrEMBL
Match: A0A0A0L4J7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G039300 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.3e-51
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLSKFAQSLGLR
Sbjct: 131 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSKFAQSLGLR 190

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 101
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR
Sbjct: 191 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 230

[Close]

BLAST of MELO3C014029 vs. TrEMBL
Match: G8XQN0_CUCSA (GRAS protein OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.3e-51
Identity = 98/101 (97.03%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLS+FAQSLGLR
Sbjct: 133 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSRFAQSLGLR 192

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRY 102
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR+
Sbjct: 193 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRF 233

[Close]

BLAST of MELO3C014029 vs. TrEMBL
Match: B9IDL7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s01070g PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.7e-35
Identity = 78/107 (72.90%), Postives = 87/107 (81.31%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-----FPSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           IH++DFDIMHGVQWPPLMQALADR      P PMLRIT TG DLN LH+TGDRL KFAQS
Sbjct: 169 IHIIDFDIMHGVQWPPLMQALADRPNNTLHPPPMLRITGTGHDLNILHRTGDRLLKFAQS 228

Query: 62  LGLRFQFHPLLLLHDRDHHRV--IPAALTLFPDEALAVNCVLYLHRY 102
           LGLRFQFHPLLLL++        +P+A+TL PDEALAVNCVLYLHR+
Sbjct: 229 LGLRFQFHPLLLLNNDPTTLALYLPSAITLLPDEALAVNCVLYLHRF 275

[Close]

BLAST of MELO3C014029 vs. TrEMBL
Match: A0A067K060_JATCU (GRAS21 protein OS=Jatropha curcas GN=GRAS21 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-33
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-----FPSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           IH++DFDIMHGVQWPPLMQALA+R     +P PMLRIT TG DLN LH+TGDRL KFAQS
Sbjct: 161 IHIIDFDIMHGVQWPPLMQALAERSTNTLYPPPMLRITGTGHDLNILHRTGDRLFKFAQS 220

Query: 62  LGLRFQFHPLLLLHDRDHHRV---IPAALTLFPDEALAVNCVLYLHR 101
           LGL+FQFHPLLL  + DH  +   +P+A+T+ P+EALAVNCV YLHR
Sbjct: 221 LGLKFQFHPLLL--NNDHSALPLHLPSAITILPNEALAVNCVFYLHR 265

[Close]

BLAST of MELO3C014029 vs. TrEMBL
Match: B9I203_POPTR (LATERAL SUPPRESSOR family protein OS=Populus trichocarpa GN=POPTR_0012s02710g PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-33
Identity = 75/107 (70.09%), Postives = 85/107 (79.44%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-----FPSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           IH++DFDIMHGVQWPPLMQALA+R      P PMLRIT TG DLN LH+TGDRL KFAQS
Sbjct: 170 IHIIDFDIMHGVQWPPLMQALAERSNNTLHPPPMLRITGTGHDLNVLHRTGDRLLKFAQS 229

Query: 62  LGLRFQFHPLLLLHD--RDHHRVIPAALTLFPDEALAVNCVLYLHRY 102
           LGLRF FHPLLLL++        +P+A+TL PDEALAVNCV YLHR+
Sbjct: 230 LGLRFHFHPLLLLNNDPTSLAHYLPSAITLLPDEALAVNCVSYLHRF 276

[Close]

BLAST of MELO3C014029 vs. TAIR10
Match: AT1G55580.1 (AT1G55580.1 GRAS family transcription factor)

HSP 1 Score: 100.1 bits (248), Expect = 8.4e-22
Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRF-----PSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           +H+LD DI  G+QWPPLMQALA+R      P P LRIT  G D+  L++TGDRL++FA S
Sbjct: 179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLNRTGDRLTRFADS 238

Query: 62  LGLRFQFHPLLLLHDRDHHRVIP---AALTLFPDEALAVNCVLYLHR 101
           LGL+FQFH L+++ +     ++     AL+    E +AVNCV +LH+
Sbjct: 239 LGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHK 285

[Close]

BLAST of MELO3C014029 vs. TAIR10
Match: AT1G63100.1 (AT1G63100.1 GRAS family transcription factor)

HSP 1 Score: 75.1 bits (183), Expect = 2.9e-14
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSPM-LRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +H++DFDI  G+QWP   Q+LA R   P  +RIT  G     L++TGDRL  FA+++ L+
Sbjct: 386 VHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQ 445

Query: 62  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 101
           F+FHP++   DR    V    L +   E++AVNCV+ +H+
Sbjct: 446 FEFHPVV---DR-LEDVRLWMLHVKEGESVAVNCVMQMHK 481

[Close]

BLAST of MELO3C014029 vs. TAIR10
Match: AT5G66770.1 (AT5G66770.1 GRAS family transcription factor)

HSP 1 Score: 65.5 bits (158), Expect = 2.3e-11
Identity = 40/107 (37.38%), Postives = 57/107 (53.27%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHK--------TGDRLSKF 61
           IH++DF I+ G+QWP L+QALA R      +I  +G+    L +        TG+RL  F
Sbjct: 320 IHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDF 379

Query: 62  AQSLGLRFQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 101
           A+ L L F F P+L       H +  ++  + PDE LAVN +L L++
Sbjct: 380 AKVLDLNFDFIPIL----TPIHLLNGSSFRVDPDEVLAVNFMLQLYK 422

[Close]

BLAST of MELO3C014029 vs. TAIR10
Match: AT3G54220.1 (AT3G54220.1 GRAS family transcription factor)

HSP 1 Score: 63.9 bits (154), Expect = 6.6e-11
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPSPM-LRITATGLDLNFLHKTGDRLSKFAQSLGLR 61
           +H++D DIM G+QWP L   LA R   P  +R+T  G  +  L  TG RLS FA  LGL 
Sbjct: 401 VHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLP 460

Query: 62  FQFHPL 67
           F+F PL
Sbjct: 461 FEFCPL 466

[Close]

BLAST of MELO3C014029 vs. TAIR10
Match: AT1G66350.1 (AT1G66350.1 RGA-like 1)

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADRFPS--PMLRITATGLDLNFLHKTGDRLSKFAQSLGL 61
           +HV+D  + HG+QWP L+QALA R P+  P  R+T  G  L  + + G +L + A ++G+
Sbjct: 254 VHVIDLGLNHGLQWPALIQALALR-PNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGV 313

Query: 62  RFQFHPLLLLHDRDHHRVIPAALTLFPD-EALAVNCVLYLHR 101
            F+F  + L +  D   + P  L + P  E++AVN V  LHR
Sbjct: 314 NFEFKSIALNNLSD---LKPEMLDIRPGLESVAVNSVFELHR 351

[Close]

BLAST of MELO3C014029 vs. NCBI nr
Match: gi|659096187|ref|XP_008448967.1| (PREDICTED: scarecrow-like protein 18 [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR
Sbjct: 136 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 195

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 101
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR
Sbjct: 196 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 235

[Close]

BLAST of MELO3C014029 vs. NCBI nr
Match: gi|700200826|gb|KGN55959.1| (hypothetical protein Csa_3G039300 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 6.2e-51
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLSKFAQSLGLR
Sbjct: 131 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSKFAQSLGLR 190

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 101
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR
Sbjct: 191 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 230

[Close]

BLAST of MELO3C014029 vs. NCBI nr
Match: gi|778675655|ref|XP_004147990.2| (PREDICTED: scarecrow-like protein 18 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 6.2e-51
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLSKFAQSLGLR
Sbjct: 133 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSKFAQSLGLR 192

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 101
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR
Sbjct: 193 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR 232

[Close]

BLAST of MELO3C014029 vs. NCBI nr
Match: gi|821595303|ref|NP_001295852.1| (scarecrow-like protein 18 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 6.2e-51
Identity = 98/101 (97.03%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGLDLNFLHKTGDRLSKFAQSLGLR 60
           MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATG+DLNFLHKTGDRLS+FAQSLGLR
Sbjct: 133 MIHVLDFDIMHGVQWPPLMQALADRFPSPMLRITATGVDLNFLHKTGDRLSRFAQSLGLR 192

Query: 61  FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRY 102
           FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHR+
Sbjct: 193 FQFHPLLLLHDRDHHRVIPAALTLFPDEALAVNCVLYLHRF 233

[Close]

BLAST of MELO3C014029 vs. NCBI nr
Match: gi|224132686|ref|XP_002321384.1| (hypothetical protein POPTR_0015s01070g [Populus trichocarpa])

HSP 1 Score: 154.8 bits (390), Expect = 8.1e-35
Identity = 78/107 (72.90%), Postives = 87/107 (81.31%), Query Frame = 1


Query: 2   IHVLDFDIMHGVQWPPLMQALADR-----FPSPMLRITATGLDLNFLHKTGDRLSKFAQS 61
           IH++DFDIMHGVQWPPLMQALADR      P PMLRIT TG DLN LH+TGDRL KFAQS
Sbjct: 169 IHIIDFDIMHGVQWPPLMQALADRPNNTLHPPPMLRITGTGHDLNILHRTGDRLLKFAQS 228

Query: 62  LGLRFQFHPLLLLHDRDHHRV--IPAALTLFPDEALAVNCVLYLHRY 102
           LGLRFQFHPLLLL++        +P+A+TL PDEALAVNCVLYLHR+
Sbjct: 229 LGLRFQFHPLLLLNNDPTTLALYLPSAITLLPDEALAVNCVLYLHRF 275

The following BLAST results are available for this feature:

BLAST of MELO3C014029 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SCL18_ARATH	1.5e-20	48.60	Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1	[more]
MOC_ORYSJ	2.6e-17	42.37	Protein MONOCULM 1 OS=Oryza sativa subsp. japonica GN=MOC1 PE=2 SV=1	[more]
SCL28_ARATH	5.1e-13	42.00	Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=1 SV=1	[more]
NSP2_MEDTR	1.5e-12	45.63	Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1	[more]
SCR_IPONI	1.4e-10	48.48	Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1	[more]

BLAST of MELO3C014029 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4J7_CUCSA	4.3e-51	99.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G039300 PE=3 SV=1	[more]
G8XQN0_CUCSA	4.3e-51	97.03	GRAS protein OS=Cucumis sativus PE=2 SV=1	[more]
B9IDL7_POPTR	5.7e-35	72.90	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s01070g PE=3 SV=1	[more]
A0A067K060_JATCU	2.4e-33	69.16	GRAS21 protein OS=Jatropha curcas GN=GRAS21 PE=2 SV=1	[more]
B9I203_POPTR	2.4e-33	70.09	LATERAL SUPPRESSOR family protein OS=Populus trichocarpa GN=POPTR_0012s02710g PE...	[more]

BLAST of MELO3C014029 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55580.1	8.4e-22	48.60	GRAS family transcription factor	[more]
AT1G63100.1	2.9e-14	42.00	GRAS family transcription factor	[more]
AT5G66770.1	2.3e-11	37.38	GRAS family transcription factor	[more]
AT3G54220.1	6.6e-11	48.48	GRAS family transcription factor	[more]
AT1G66350.1	1.1e-10	38.24	RGA-like 1	[more]

BLAST of MELO3C014029 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096187\|ref\|XP_008448967.1\|	2.8e-51	100.00	PREDICTED: scarecrow-like protein 18 [Cucumis melo]	[more]
gi\|700200826\|gb\|KGN55959.1\|	6.2e-51	99.00	hypothetical protein Csa_3G039300 [Cucumis sativus]	[more]
gi\|778675655\|ref\|XP_004147990.2\|	6.2e-51	99.00	PREDICTED: scarecrow-like protein 18 [Cucumis sativus]	[more]
gi\|821595303\|ref\|NP_001295852.1\|	6.2e-51	97.03	scarecrow-like protein 18 [Cucumis sativus]	[more]
gi\|224132686\|ref\|XP_002321384.1\|	8.1e-35	72.90	hypothetical protein POPTR_0015s01070g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0010223	secondary shoot formation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:0010014	meristem initiation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014029T1	MELO3C014029T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 1..101 score: 2.5
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 1..104 score: 22
None	No IPR available	PANTHER	PTHR31636	FAMILY NOT NAMED	coord: 1..100 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014029	Csa3G039300	Cucumber (Chinese Long) v2	cumeB243
MELO3C014029	Cla004408	Watermelon (97103) v1	mewmB447
MELO3C014029	ClCG10G003590	Watermelon (Charleston Gray)	mewcgB415
MELO3C014029	ClCG00G000330	Watermelon (Charleston Gray)	mewcgB407
MELO3C014029	Cla97C10G188130	Watermelon (97103) v2	mewmbB430
MELO3C014029	Bhi11G000300	Wax gourd	mewgoB506
MELO3C014029	CSPI03G03530	Wild cucumber (PI 183967)	cpimeB240
MELO3C014029	Cucsa.041490	Cucumber (Gy14) v1	cgymeB013
MELO3C014029	CmaCh16G010150	Cucurbita maxima (Rimu)	cmameB290
MELO3C014029	CmaCh06G007170	Cucurbita maxima (Rimu)	cmameB764
MELO3C014029	CmoCh16G010540	Cucurbita moschata (Rifu)	cmomeB283
MELO3C014029	CmoCh06G007340	Cucurbita moschata (Rifu)	cmomeB756
MELO3C014029	Lsi07G013900	Bottle gourd (USVL1VR-Ls)	lsimeB446
MELO3C014029	Cp4.1LG14g08270	Cucurbita pepo (Zucchini)	cpemeB185
MELO3C014029	Cp4.1LG08g08030	Cucurbita pepo (Zucchini)	cpemeB814
MELO3C014029	CsGy3G003520	Cucumber (Gy14) v2	cgybmeB209
MELO3C014029	Carg21645	Silver-seed gourd	carmeB0856
MELO3C014029	Carg25217	Silver-seed gourd	carmeB0015
MELO3C014029	CsaV3_3G003590	Cucumber (Chinese Long) v3	cucmeB246

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None