MELO3C014012.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C014012.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRibonuclease CAF1
Locationchr06 : 35841068 .. 35845521 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTCGTTCAACAAGTTTGGTATCATAATCTCACCCAAGAATTGGTCATTCTCAACGACCAACTTTTCATGTTTTCAATGATCGCGATGGACACTGAATTCCCCAGCTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATGAGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTTTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAGAACAACAAAGGGTTTGAATTCAAGAAATAGAGGAAAGACGGAATTCCATCGGCTAAATTCCGACGTGCATTTCTACCGATCTTTTCTAGCAATCGAATAACCAAACGGATCACATTCCATGGCATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCGAAGTCCATGATGGAATTCGCCATCGTAACTCAACGTCATCTTGGTACAGTGAACGACCTCAAGCACATGATTCACAATTGTGAACGTTTAATGAACGGTGAACTTGGACTTAAGAGACTTGCTGAGTTACTCAATGTAAACGATACTATTTTCAACGGTGGTTCTGATAGTTTGCTGATAGCTTTAGTGTATGCGAAGATATATGAAGAAGATGCTCAAGTTTTTGTTGGAGATTACTGATGGATTTCTATGGTTTTCATTATAGAATTCGAGGGATATAGGACCTTTTGCTATCCAATAATATATTACCCAAACTCATTACTTTTCCAAAATTTTCAACTTTTTAGTTTCATCTCATCGAGAGCGACTCAATGTAATGATGAACTAAATTTGAGATTATTACTCTGAAAAATTAATATTATTTATAAAAATTTTGATTATTTTGATATTCAACCAATTAATTGTTTGAGATAACATGGGATTCTCCAATTTTGAAAAATAAAAATTTTTATTTTGAAATTTAATAAGGTTATTTTTTATATAAAATCTATCATTCTTAAATTTTGAAAAATAATGATTTTTTTATTTTAAAATTCAATTAAGGTTATTTTTATATAAAATCTACCCTTTTTAAAAAATAATAATTTTTTATTTATCATTGAGATTGTTAAATTTTGAATCTAAAAATAATAATTTTTTTATTTTGAAATTTTGTTATTTTGAAATAAAATGTATGGTTGAGATTCTACGAAATGAAGACTATAATTTGATTATTTTGAAATTAGTAAGATGGAATAAAGTTGTTTAAAATGTTGAATCAATTAGATGAATTCCGAGATATTAGAGAAGAAGTTATTATGTGGATTGTTTTTCTTTACCACATCCAATATAATTAAGAAAGATTTAGAGGAAATGCCTAATTTGACAACGAAATTTCACACTTAACATAAATTCTTCGTTTTTTACATGAATAGAAATTCTCTTTTTTAGGGTCTATTTTGTCCTTATGATTATCATTTAATATATATAATCTTCGAATTTAATTATTATTTATTTCCTTAATTACATTTTTATTATCATAATTGTATACATTGTAATTTCCTTATTTATATTTTACATAAATATGAATTAATTATATTAGTAAAAAAATGTTTCCCATTTATTATGGAAATATTATTCAAAAAGATATATTTTCATTTAATTTTGCCTATTTTCACTGCTCACAAGATTTTTCCCATTAGCCAAAAACTGTTCATCTATATCAATTCTTCGAAAAATTTTCTTCCGCCGCCGAAAGAAGACCTCAACCATCCTTATATTTTTTTTTCTGTCGTAATTTTATTACACAAGCGAATCTTTTGACCACCGTCGAAAATCGTCGTTGACCGAAAAAGAAATTTCACCACCGGATTTGTCTAAGAGCTTTTCCGACGTTTTTTTATTTCACGATTCCATTTCGTTTCACATATATCCGATTAGTCTATTTAACAATATCATCATATGTCAATATACACCCAATATATTGTATGTTAGATTTTAAATTTCCGTTACAATAGCTACATGTGTTCTCTGTTTATATAAATATATAAACCGTCATATTAACAATGCAAGTACATTCATCCGGATATACAATATTGCATTATATTTAAGTATATATATACCCCTTACTATATATAATATATATACCCCATCATAGTAACAATGTACGTACATTTATCCGCACCGGAAGGCAAGAATGTGCTGCTGAACACTCACCGGAAGAAAGAATGATGTGGAAAGGATGAAGGAGATTTTCAAAACCCTAAAAATCATTTGAAGAAAATGTTCAACGCCCTTCGGAGAGTATAATGGTAACATGCACAAATTGAATGGGATGTGATATCTTACAGATGATTTGATGGTTTATTTTCTTTTTTTGGAAGGAAATTAGAATATTCGAGTGTGGGTGCATAGTTTGTATTAATTATAGAGTATTTGTAGATTCTGTTACAAGTGTATTTAGAAATCACATTTGTCACTTATATAAGAGCATTTAAAGCATTGTTCTCCCAATTTTTATTTAAAAATTTTCTGTTTTGCTATTTTTTCAATTTAAAAATAAATTTATCATCTATCCAAAGCAAACCTCTAATTTTGTCATTCTTCTTGTCAGTCCTTGAATACACAGACTAATGTTCTAAGATAAATATCTATATTCATTCTACCAATTTTTTTTATATAAACTAAAACTAAGTAATTATTTAATTAAAGGTAAGAGAATAATTAATATTGTAGGGTTGAATTAAATTTAGTATTATTCCGTATGTTATTACATTAATGGTTTATTTAATTAGTTCCAATAAAAATAAAGGAATATTTTTATTATTAACATTTATTTAATTAAATTAAAAAATTATTTAACAAATACAAAGTAAATGAAAAAAATCACCAAAAATATTTATAAATATAGCAAAATTTCATATTTTCTTAGTGATAGATGATATCTATCTATCAACTACCTATCCATATCTATCAATGATATTTTTTTATATTTACAAATATTTTCGTTCATTTTGTTATATATACTAAATAAGTTATATAAATATGATTGCATATATATGATTAACTAAAATGAATCAAAATTAAAAGTTCAAAAATCAAATTAGTATCAAAACTATAATGTAATGATGAACTAAATTTGAGATTATTACTCTGAAAAATTAATATTATTTATAAAAATATTGGAGAACTGTTATAAATAGAAAAAACAGCTATTTATAAAATATAGCAAAAATAAAAACTCCAATGTAGAGAATTTGATGGATTTTGTTATATTTTGTAAATAGTTTCAATATTTTGTTATTCTTAAAAATGCCCCTTTAATAATAATTATTTTACGCTTACATTAAAATAAAAACAAATTTATTTTCCTTTTCCCTTAAATATTTTTATGCTACAAATCCAATAATATATTTTTGGTCCAATAAAAATAAAAAATAAAATAAATATTTAATATAAAGTAGTTAATTAGTGGAATTTATTTTCCCTTTTCCTTAAGAAAACTCAATTCCTTTTCCTTTTACAAATCTCCATTCCAAAATTCTCTCTATATATGTTTAGAGAACCCAACAATCATCAATCATCTCTCAATGTAAAAATCTTTGTTAAATCATGAGTTTCATTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTAGCCATTCTCAACGACCAACTTTTCAAGTTTCCAGTGATCGCGATGGACACTGAGTTCCCCGGCTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACCGGGTCTCACTTTGATGGATGAGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATTCAATTTTTAAAGAACAACAAAGGATTTGAATTTAAGAAACAGAAGAAAGACGGAATTCCATCAACTGAATTCCGACGTGCATTTTTGCCGATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTCCATGGCATTTACGTGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGTCGGAGTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGTGAACGACCTCAAGCACATGATTCGCAATTGTGAACACTTAACAGACGGTGAACTTGGACTTAAGAGACTTGTCGAGTTACTCGATGTGAACGACACTATTTTCAACGGTGGTTTTGATAGTTTGCTGATAGCTTTGGCCTATATGAAGATGAAGAAGACGCTCAAGTTTTCGCTAGAGATTACTAATGGATTTTTGTATGGTTTTCAATACAGAATTCGAGGATATAGAACCTTTTGCTATCCAATAACATATTACCCAAATTCATTACCTTTCCAA

mRNA sequence

ATGAGTTTCGTTCAACAAGTTTGGTATCATAATCTCACCCAAGAATTGGTCATTCTCAACGACCAACTTTTCATGTTTTCAATGATCGCGATGGACACTGAATTCCCCAGCTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATGAGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTTTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAGAACAACAAAGGGTTTGAATTCAAGAAATAGAGGAAAGACGGAATTCCATCGGCTAAATTCCGACGTGCATTTCTACCGATCTTTTCTAGCAATCGAATAACCAAACGGATCACATTCCATGGCATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGTCGGAGTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGTGAACGACCTCAAGCACATGATTCGCAATTGTGAACACTTAACAGACGGTGAACTTGGACTTAAGAGACTTGTCGAGTTACTCGATGTGAACGACACTATTTTCAACGGTGGTTTTGATAGTTTGCTGATAGCTTTGGCCTATATGAAGATGAAGAAGACGCTCAAGTTTTCGCTAGAGATTACTAATGGATTTTTGTATGGTTTTCAATACAGAATTCGAGGATATAGAACCTTTTGCTATCCAATAACATATTACCCAAATTCATTACCTTTCCAA

Coding sequence (CDS)

ATGATGATCAGAACCATGTCGGAGTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGTGAACGACCTCAAGCACATGATTCGCAATTGTGAACACTTAACAGACGGTGAACTTGGACTTAAGAGACTTGTCGAGTTACTCGATGTGAACGACACTATTTTCAACGGTGGTTTTGATAGTTTGCTGATAGCTTTGGCCTATATGAAGATGAAGAAGACGCTCAAGTTTTCGCTAGAGATTACTAATGGATTTTTGTATGGTTTTCAATACAGAATTCGAGGATATAGAACCTTTTGCTATCCAATAACATATTACCCAAATTCATTACCTTTCCAA

Protein sequence

MMIRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNGGFDSLLIALAYMKMKKTLKFSLEITNGFLYGFQYRIRGYRTFCYPITYYPNSLPFQ
Homology
[Close]
BLAST of MELO3C014012.2 vs. NCBI nr
Match: XP_008454486.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-50
Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0 

Query: 1   MMIRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNG 60
           MMIRTM ESMVEFAIIAQRHLGTVNDLKHMIRNCE+L +GELGLKRL ELL+VNDTIFNG
Sbjct: 157 MMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNG 216

Query: 61  GFDSLLIALAYMKMKKTLKFSLEITNGFLYGFQYRIRGYRTFCYPITYYPNSLPF 116
           G DSLLIALAY KMKKTLKFS EIT+GFLYGF YRIRGYRTFCY ITYYPNSLPF
Sbjct: 217 GSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF 271

[Close]
BLAST of MELO3C014012.2 vs. NCBI nr
Match: XP_004151393.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN53010.1 hypothetical protein Csa_4G011090 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-36
Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0 

Query: 1   MMIRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNG 60
           M+I+ M ESMVEFAIIAQR LGTVNDLK+MI +CE L  GELGLKRL ELLDVNDT+F+G
Sbjct: 158 MIIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSG 217

Query: 61  GFDSLLIALAYMKMKKTLKFSLEITNGFLYGFQYRIRGYRTFCY 105
           G DSLLIALAY+KMKK LK S E T GFLYGFQYRIRGY+TFCY
Sbjct: 218 GSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY 260

[Close]
BLAST of MELO3C014012.2 vs. NCBI nr
Match: XP_008466654.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 5.4e-28
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 1   MMIRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNG 60
           MMIRTM ESMVEFA IAQR LGTVNDLKHMI NCEHL +GELGLKRL ELL+VNDTIFNG
Sbjct: 157 MMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNG 216

Query: 61  GFDSLLIALAYMKMKKTLKF 81
           G DSLLIALAY+KMKK LK+
Sbjct: 217 GSDSLLIALAYVKMKKMLKW 236

[Close]
BLAST of MELO3C014012.2 vs. NCBI nr
Match: XP_008449177.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-22
Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 5   TMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNGGFDS 64
           TM +SM+EFAI+ QRHLGTVNDLKHMI NCE L +GELGLKRL ELL+VNDTIFNGG DS
Sbjct: 80  TMPKSMMEFAIVTQRHLGTVNDLKHMIHNCERLMNGELGLKRLAELLNVNDTIFNGGSDS 139

Query: 65  LLIALAYMKM 75
           LLIAL Y K+
Sbjct: 140 LLIALVYAKI 149

[Close]
BLAST of MELO3C014012.2 vs. NCBI nr
Match: XP_023550519.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.1 bits (222), Expect = 5.3e-15
Identity = 52/100 (52.00%), Postives = 62/100 (62.00%), Query Frame = 0 

Query: 3   IRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVN--DTIFNG 62
           I +M  SM  FAIIA   LGTV DLKHM R  ++L +G LGLK+L +LL +N   T    
Sbjct: 169 IISMPTSMSMFAIIAAHLLGTVTDLKHMARYSDYLFNGNLGLKKLAKLLQINRIGTAHFA 228

Query: 63  GFDSLLIALAYMKMKKTLKFSLEITNGFLYGFQYRIRGYR 101
           G DSLL A  Y KMK  +K   +I  GFLYG  Y I+GYR
Sbjct: 229 GSDSLLTASVYAKMKAIMKVEPKIHEGFLYGLPYPIQGYR 268

[Close]
BLAST of MELO3C014012.2 vs. TAIR10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 40.8 bits (94), Expect = 6.7e-04
Identity = 28/91 (30.77%), Postives = 45/91 (49.45%), Query Frame = 0 

Query: 4   RTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVN--DTIFNGG 63
           + + +S  +F  +   +  TV D+KH+++ C  L     GL +L ELL+V         G
Sbjct: 177 QNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLHG---GLNKLAELLEVERVGICHQAG 236

Query: 64  FDSLLIALAYMKMKKTLKFS-LEITNGFLYG 92
            DSLL +  + K+K+      L   +G LYG
Sbjct: 237 SDSLLTSCTFRKLKENFFVGPLHKYSGVLYG 264

[Close]
BLAST of MELO3C014012.2 vs. TrEMBL
Match: tr|A0A1S3BY95|A0A1S3BY95_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494884 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50
Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0 

Query: 1   MMIRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNG 60
           MMIRTM ESMVEFAIIAQRHLGTVNDLKHMIRNCE+L +GELGLKRL ELL+VNDTIFNG
Sbjct: 157 MMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNG 216

Query: 61  GFDSLLIALAYMKMKKTLKFSLEITNGFLYGFQYRIRGYRTFCYPITYYPNSLPF 116
           G DSLLIALAY KMKKTLKFS EIT+GFLYGF YRIRGYRTFCY ITYYPNSLPF
Sbjct: 217 GSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF 271

[Close]
BLAST of MELO3C014012.2 vs. TrEMBL
Match: tr|A0A0A0KTU4|A0A0A0KTU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011090 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.7e-36
Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0 

Query: 1   MMIRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNG 60
           M+I+ M ESMVEFAIIAQR LGTVNDLK+MI +CE L  GELGLKRL ELLDVNDT+F+G
Sbjct: 158 MIIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSG 217

Query: 61  GFDSLLIALAYMKMKKTLKFSLEITNGFLYGFQYRIRGYRTFCY 105
           G DSLLIALAY+KMKK LK S E T GFLYGFQYRIRGY+TFCY
Sbjct: 218 GSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY 260

[Close]
BLAST of MELO3C014012.2 vs. TrEMBL
Match: tr|A0A1S3CRS2|A0A1S3CRS2_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103504009 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.6e-28
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 1   MMIRTMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNG 60
           MMIRTM ESMVEFA IAQR LGTVNDLKHMI NCEHL +GELGLKRL ELL+VNDTIFNG
Sbjct: 157 MMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNG 216

Query: 61  GFDSLLIALAYMKMKKTLKF 81
           G DSLLIALAY+KMKK LK+
Sbjct: 217 GSDSLLIALAYVKMKKMLKW 236

[Close]
BLAST of MELO3C014012.2 vs. TrEMBL
Match: tr|A0A1S3BLG3|A0A1S3BLG3_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103491127 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 5   TMSESMVEFAIIAQRHLGTVNDLKHMIRNCEHLTDGELGLKRLVELLDVNDTIFNGGFDS 64
           TM +SM+EFAI+ QRHLGTVNDLKHMI NCE L +GELGLKRL ELL+VNDTIFNGG DS
Sbjct: 80  TMPKSMMEFAIVTQRHLGTVNDLKHMIHNCERLMNGELGLKRLAELLNVNDTIFNGGSDS 139

Query: 65  LLIALAYMKM 75
           LLIAL Y K+
Sbjct: 140 LLIALVYAKI 149

[Close]
BLAST of MELO3C014012.2 vs. TrEMBL
Match: tr|A0A0A0KYV8|A0A0A0KYV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011095 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.5e-13
Identity = 46/64 (71.88%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 46  RLVELLDVNDTIFNGGFDSLLIALAYMKMKKTLKFSLEITNGFLYGFQYRIRGYRTFCYP 105
           RL ELL+VNDTIFNGG DSLLIA A  KMKK LK S E  +GFLYGFQYRI+GY+T  Y 
Sbjct: 2   RLAELLEVNDTIFNGGSDSLLIASACAKMKK-LKLSRENADGFLYGFQYRIQGYKT--YA 61

Query: 106 ITYY 110
           I YY
Sbjct: 62  ILYY 62

The following BLAST results are available for this feature:
BLAST of MELO3C014012.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008454486.13.0e-5089.57PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo][more]
XP_004151393.17.1e-3678.85PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN530... [more]
XP_008466654.15.4e-2885.00PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo][more]
XP_008449177.14.5e-2278.57PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo][more]
XP_023550519.15.3e-1552.00putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C014012.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80780.36.7e-0430.77Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of MELO3C014012.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C014012.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BY95|A0A1S3BY95_CUCME2.0e-5089.57putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494... [more]
tr|A0A0A0KTU4|A0A0A0KTU4_CUCSA4.7e-3678.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011090 PE=4 SV=1[more]
tr|A0A1S3CRS2|A0A1S3CRS2_CUCME3.6e-2885.00putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103504... [more]
tr|A0A1S3BLG3|A0A1S3BLG3_CUCME2.9e-2278.57putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103491... [more]
tr|A0A0A0KYV8|A0A0A0KYV8_CUCSA9.5e-1371.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011095 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014012.2.1MELO3C014012.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 1..92
e-value: 3.9E-9
score: 38.2
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 6..91

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C014012.2Cucumber (Gy14) v2cgybmedB202
MELO3C014012.2Cucumber (Gy14) v2cgybmedB354
MELO3C014012.2Cucumber (Gy14) v1cgymedB497
MELO3C014012.2Cucumber (Gy14) v1cgymedB533
MELO3C014012.2Cucurbita maxima (Rimu)cmamedB319
MELO3C014012.2Cucurbita maxima (Rimu)cmamedB343
MELO3C014012.2Cucurbita maxima (Rimu)cmamedB869
MELO3C014012.2Cucurbita moschata (Rifu)cmomedB304
MELO3C014012.2Cucurbita moschata (Rifu)cmomedB330
MELO3C014012.2Cucurbita moschata (Rifu)cmomedB861
MELO3C014012.2Cucurbita pepo (Zucchini)cpemedB211
MELO3C014012.2Cucurbita pepo (Zucchini)cpemedB232
MELO3C014012.2Cucurbita pepo (Zucchini)cpemedB948
MELO3C014012.2Wild cucumber (PI 183967)cpimedB225
MELO3C014012.2Wild cucumber (PI 183967)cpimedB398
MELO3C014012.2Cucumber (Chinese Long) v2cumedB224
MELO3C014012.2Cucumber (Chinese Long) v2cumedB390
MELO3C014012.2Melon (DHL92) v3.6.1medmedB012
MELO3C014012.2Bottle gourd (USVL1VR-Ls)lsimedB462
MELO3C014012.2Watermelon (Charleston Gray)medwcgB401
MELO3C014012.2Watermelon (Charleston Gray)medwcgB396
MELO3C014012.2Watermelon (Charleston Gray)medwcgB409
MELO3C014012.2Watermelon (97103) v1medwmB440
MELO3C014012.2Watermelon (97103) v1medwmB469
MELO3C014012.2Silver-seed gourdcarmedB0866
MELO3C014012.2Cucumber (Chinese Long) v3cucmedB231
MELO3C014012.2Cucumber (Chinese Long) v3cucmedB408
MELO3C014012.2Watermelon (97103) v2medwmbB410
MELO3C014012.2Watermelon (97103) v2medwmbB415
MELO3C014012.2Wax gourdmedwgoB521