MELO3C013637.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C013637.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionprotein ROOT HAIR DEFECTIVE 3
Locationchr11 : 19562390 .. 19563607 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCCTCAAAGTAGTGGTAAGTAGTTTGCTTTTAGAAGCTTGTTGTACCAAAGCAATAAATTTAAGTTCATGCTTCTTGGCTTCTACTAGTACTTTAATTATTATTATTTTCTTTAAAGAAGTTAGTGTTCTGCCTCTATATTTTTAATTGTGAACTTCAATTTAATTATTCAACCTTTATGTTTACTTTTGTACATTTGAATATTTGAACTCAGATTGATATCTTCCCTTCACTTTATGGTCTTTTGATAAATTCTTATTGGCTTTTTAATATATAATATAATCTGTTTAGGGAAGAGTACACTACTAAATAATATGTTTGGAACCAACTTCAGAGAGATAGATGCTTTTAAAGGGAGGTAAGTAATTCTCTTCTCCTAATGTCTTTGGTTTTTGTAGGTAAGGAACAATCCTTCTATCTTTAGTTTATTTGGGCTCTGTGGCTAAAAAGTGAAAAATTGATGTCACTTTCTAGGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGACATTGAGCCTTGTACACTTGTGATGAATTTGGAAGGAACTGATGGAAGAGAGCGAGGGAGGTGCATTTCTATGCCCTTTTTGGTTTTCATGTGTTTCTGTTGTTTGTACTTTCGTTTATTTTTGCCTTTTTTATTATTTTTTATTTTTTATTTTTCCACAAATATGTTTGTCAATGTTTTGAATTCAGTATATCATTGCATGCTTCTTTTTGCAAATACACATATGTGTATGTACATCTGTATGTGTGTGTATGTAAGGATATATGTGTGTGTGTGTGTATGTATGTTATGTATGTATTTATGCAAACATACTTATTTTTTTGTATCATATCAAGCTAAGACGTATACTTTGGTTGTTTCTTAATTTGCTTTTGTCACATTCTTTTTAAGGACGACACTGCATTTGAGAAGCAAAGTGCCCTCTTTGTGCTTGCCGTGTAAGATATAGTGCTAATAAATATGTGAGTGCCATTAGTTTTGTTTTTCAAATGTTTCTTTTATCTTGTAACATGTGTTTCTATTTTATTTTCTTCTAAAATTTATTGTTTCCACACTATCTTGTTTAAGAAGTTGTTATAATTTAATTTAGATGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAATCTGGTTGGGGGACATGGTGTATCTTTTATAG

mRNA sequence

ATGGGCCCTCAAAGTAGTGGGAAGAGTACACTACTAAATAATATGTTTGGAACCAACTTCAGAGAGATAGATGCTTTTAAAGGGAGGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGACATTGAGCCTTGTACACTTGTGATGAATTTGGAAGGAACTGATGGAAGAGAGCGAGGGAGGACGACACTGCATTTGAGAAGCAAAGTGCCCTCTTTGTGCTTGCCGTATGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAATCTGGTTGGGGGACATGGTGTATCTTTTATAG

Coding sequence (CDS)

ATGGGCCCTCAAAGTAGTGGGAAGAGTACACTACTAAATAATATGTTTGGAACCAACTTCAGAGAGATAGATGCTTTTAAAGGGAGGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGACATTGAGCCTTGTACACTTGTGATGAATTTGGAAGGAACTGATGGAAGAGAGCGAGGGAGGACGACACTGCATTTGAGAAGCAAAGTGCCCTCTTTGTGCTTGCCGTATGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAA

Protein sequence

MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERGRTTLHLRSKVPSLCLPYGVTILAVSRLQISLSSKLYFRYSL
Homology
[Close]
BLAST of MELO3C013637.2 vs. NCBI nr
Match: KHN11286.1 (Protein ROOT HAIR DEFECTIVE 3 like 1 [Glycine soja])

HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27
Identity = 58/62 (93.55%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
          MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRE
Sbjct: 19 MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWMARCADIEPCTLVMDLEGTDGRE 78

Query: 61 RG 63
          RG
Sbjct: 79 RG 80

[Close]
BLAST of MELO3C013637.2 vs. NCBI nr
Match: XP_003531616.1 (protein ROOT HAIR DEFECTIVE 3 homolog 1 [Glycine max] >KRH44148.1 hypothetical protein GLYMA_08G193200 [Glycine max])

HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27
Identity = 58/62 (93.55%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWMARCADIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. NCBI nr
Match: XP_010262124.1 (PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Nelumbo nucifera])

HSP 1 Score: 129.0 bits (323), Expect = 9.1e-27
Identity = 58/62 (93.55%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAF+GRSQTTKGIWLARCADIEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. NCBI nr
Match: ADN34108.1 (protein SEY1 [Cucumis melo subsp. melo])

HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. NCBI nr
Match: XP_004141681.1 (PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1 [Cucumis sativus])

HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. TAIR10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3))

HSP 1 Score: 123.2 bits (308), Expect = 9.0e-29
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN++FGTNF E+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRE
Sbjct: 48  MGPQSSGKSTLLNHLFGTNFMEMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 107

Query: 61  RG 63
           RG
Sbjct: 108 RG 109

[Close]
BLAST of MELO3C013637.2 vs. TAIR10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3))

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-28
Identity = 54/62 (87.10%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN++FGTNFRE+DAF+GRSQTTKGIW+ARCA IEPCT+VM+LEGTDGRE
Sbjct: 43  MGPQSSGKSTLLNHLFGTNFREMDAFRGRSQTTKGIWIARCAGIEPCTVVMDLEGTDGRE 102

Query: 61  RG 63
           RG
Sbjct: 103 RG 104

[Close]
BLAST of MELO3C013637.2 vs. TAIR10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3))

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-24
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN++F T+FRE+DAF GRSQTTKGIW+ARC  IEP T+ M+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNHLFKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. Swiss-Prot
Match: sp|Q9SSN0|RHD31_ARATH (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g72960 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-27
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN++FGTNF E+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRE
Sbjct: 48  MGPQSSGKSTLLNHLFGTNFMEMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 107

Query: 61  RG 63
           RG
Sbjct: 108 RG 109

[Close]
BLAST of MELO3C013637.2 vs. Swiss-Prot
Match: sp|P93042|RHD3_ARATH (Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-27
Identity = 54/62 (87.10%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN++FGTNFRE+DAF+GRSQTTKGIW+ARCA IEPCT+VM+LEGTDGRE
Sbjct: 43  MGPQSSGKSTLLNHLFGTNFREMDAFRGRSQTTKGIWIARCAGIEPCTVVMDLEGTDGRE 102

Query: 61  RG 63
           RG
Sbjct: 103 RG 104

[Close]
BLAST of MELO3C013637.2 vs. Swiss-Prot
Match: sp|Q2QMH2|RHD31_ORYSJ (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0604600 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26
Identity = 52/62 (83.87%), Postives = 59/62 (95.16%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN +FGTNFRE+DAF+GRSQTTKGIW+ARC  +EPCT+VM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNQLFGTNFREMDAFRGRSQTTKGIWIARCVGVEPCTVVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. Swiss-Prot
Match: sp|Q0JLS6|RHD3_ORYSJ (Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.4e-25
Identity = 52/62 (83.87%), Postives = 59/62 (95.16%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN++F TNFRE+DAFKGRSQTTKGIW+A+  +IEPCTLVM+LEGTDGRE
Sbjct: 43  MGPQSSGKSTLLNHLFRTNFREMDAFKGRSQTTKGIWMAKAHNIEPCTLVMDLEGTDGRE 102

Query: 61  RG 63
           RG
Sbjct: 103 RG 104

[Close]
BLAST of MELO3C013637.2 vs. Swiss-Prot
Match: sp|Q9FKE9|RHD32_ARATH (Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-23
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLN++F T+FRE+DAF GRSQTTKGIW+ARC  IEP T+ M+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNHLFKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. TrEMBL
Match: tr|I1KUU5|I1KUU5_SOYBN (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Glycine max OX=3847 GN=100780006 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.6e-27
Identity = 58/62 (93.55%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWMARCADIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. TrEMBL
Match: tr|A0A1U8AA95|A0A1U8AA95_NELNU (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Nelumbo nucifera OX=4432 GN=LOC104600718 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.0e-27
Identity = 58/62 (93.55%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAF+GRSQTTKGIWLARCADIEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. TrEMBL
Match: tr|A0A1S3CGU1|A0A1S3CGU1_CUCME (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucumis melo OX=3656 GN=LOC103500728 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-26
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. TrEMBL
Match: tr|E5GCA9|E5GCA9_CUCME (Protein SEY1 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-26
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRE
Sbjct: 46  MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 105

Query: 61  RG 63
           RG
Sbjct: 106 RG 107

[Close]
BLAST of MELO3C013637.2 vs. TrEMBL
Match: tr|A0A0A0K9M8|A0A0A0K9M8_CUCSA (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G451350 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-26
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRE 60
           MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRE
Sbjct: 94  MGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRE 153

Query: 61  RG 63
           RG
Sbjct: 154 RG 155

The following BLAST results are available for this feature:
BLAST of MELO3C013637.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KHN11286.17.0e-2793.55Protein ROOT HAIR DEFECTIVE 3 like 1 [Glycine soja][more]
XP_003531616.17.0e-2793.55protein ROOT HAIR DEFECTIVE 3 homolog 1 [Glycine max] >KRH44148.1 hypothetical p... [more]
XP_010262124.19.1e-2793.55PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Nelumbo nucifera][more]
ADN34108.12.6e-2693.55protein SEY1 [Cucumis melo subsp. melo][more]
XP_004141681.12.6e-2693.55PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1 [Cucumis sativus][more]
BLAST of MELO3C013637.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G72960.19.0e-2990.32Root hair defective 3 GTP-binding protein (RHD3)[more]
AT3G13870.11.5e-2887.10Root hair defective 3 GTP-binding protein (RHD3)[more]
AT5G45160.11.4e-2479.03Root hair defective 3 GTP-binding protein (RHD3)[more]
BLAST of MELO3C013637.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SSN0|RHD31_ARATH1.6e-2790.32Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g7... [more]
sp|P93042|RHD3_ARATH2.8e-2787.10Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1[more]
sp|Q2QMH2|RHD31_ORYSJ1.4e-2683.87Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|Q0JLS6|RHD3_ORYSJ3.4e-2583.87Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 P... [more]
sp|Q9FKE9|RHD32_ARATH2.4e-2379.03Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g4... [more]
BLAST of MELO3C013637.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|I1KUU5|I1KUU5_SOYBN4.6e-2793.55Protein ROOT HAIR DEFECTIVE 3 homolog OS=Glycine max OX=3847 GN=100780006 PE=3 S... [more]
tr|A0A1U8AA95|A0A1U8AA95_NELNU6.0e-2793.55Protein ROOT HAIR DEFECTIVE 3 homolog OS=Nelumbo nucifera OX=4432 GN=LOC10460071... [more]
tr|A0A1S3CGU1|A0A1S3CGU1_CUCME1.7e-2693.55Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucumis melo OX=3656 GN=LOC103500728 PE... [more]
tr|E5GCA9|E5GCA9_CUCME1.7e-2693.55Protein SEY1 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
tr|A0A0A0K9M8|A0A0A0K9M8_CUCSA1.7e-2693.55Protein ROOT HAIR DEFECTIVE 3 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G451350... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030386G_GB1_RHD3_dom
IPR008803RHD3/Sey1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013637.2.1MELO3C013637.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 1..94
e-value: 1.8E-11
score: 45.7
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 1..63
NoneNo IPR availablePANTHERPTHR11649:SF62PROTEIN ROOT HAIR DEFECTIVE 3coord: 1..63
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 1..62
e-value: 5.9E-33
score: 113.9
IPR030386GB1/RHD3-type guanine nucleotide-binding (G) domainPROSITEPS51715G_GB1_RHD3coord: 1..103
score: 22.429
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..63

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013637.2Silver-seed gourdcarmedB0357
MELO3C013637.2Silver-seed gourdcarmedB0855
MELO3C013637.2Cucumber (Chinese Long) v3cucmedB440
MELO3C013637.2Watermelon (97103) v2medwmbB097
MELO3C013637.2Wax gourdmedwgoB138
MELO3C013637.2Cucumber (Gy14) v2cgybmedB386
MELO3C013637.2Cucumber (Gy14) v1cgymedB175
MELO3C013637.2Cucurbita maxima (Rimu)cmamedB637
MELO3C013637.2Cucurbita moschata (Rifu)cmomedB624
MELO3C013637.2Cucurbita pepo (Zucchini)cpemedB795
MELO3C013637.2Wild cucumber (PI 183967)cpimedB436
MELO3C013637.2Cucumber (Chinese Long) v2cumedB427
MELO3C013637.2Watermelon (Charleston Gray)medwcgB101
MELO3C013637.2Watermelon (97103) v1medwmB115