MELO3C013531 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013531
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHistidine decarboxylase
Locationchr11 : 15892744 .. 15892974 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTACTCGCCGTGATAGCACCATCTCCATGGAACGAATAATGTTGATCTACTGCATAATAGAGGAAATACCAGTAAACATAGGTGAGATAATAAGCGAGCACATCATAGCATGGGTCAAGCATCCCCGCAGAGCAAGATCTTTCTCACACCAGATTGATAAATTGTGCTTAAAGGCATGTCTGACGTTAGATAAACTTCCTCAGGTAAAGGTGAAGGATGAAGTTTAG

mRNA sequence

ATGCCTACTCGCCGTGATAGCACCATCTCCATGGAACGAATAATGTTGATCTACTGCATAATAGAGGAAATACCAGTAAACATAGGTGAGATAATAAGCGAGCACATCATAGCATGGGTCAAGCATCCCCGCAGAGCAAGATCTTTCTCACACCAGATTGATAAATTGTGCTTAAAGGCATGTCTGACGTTAGATAAACTTCCTCAGGTAAAGGTGAAGGATGAAGTTTAG

Coding sequence (CDS)

ATGCCTACTCGCCGTGATAGCACCATCTCCATGGAACGAATAATGTTGATCTACTGCATAATAGAGGAAATACCAGTAAACATAGGTGAGATAATAAGCGAGCACATCATAGCATGGGTCAAGCATCCCCGCAGAGCAAGATCTTTCTCACACCAGATTGATAAATTGTGCTTAAAGGCATGTCTGACGTTAGATAAACTTCCTCAGGTAAAGGTGAAGGATGAAGTTTAG

Protein sequence

MPTRRDSTISMERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKACLTLDKLPQVKVKDEV*
Homology
[Close]
BLAST of MELO3C013531 vs. TrEMBL
Match: A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.9e-22
Identity = 53/76 (69.74%), Postives = 66/76 (86.84%), Query Frame = 1 

Query: 1   MPTRRDSTISMERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKA 60
           MPTR  STISMER+ML+YCI+++I VNIG+IIS HIIA VKHPR AR FS+ I++LCL+A
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  CLTLDKLPQVKVKDEV 77
           CL L+KLPQV+VKD +
Sbjct: 98  CLMLEKLPQVEVKDGI 113

[Close]
BLAST of MELO3C013531 vs. TrEMBL
Match: A0A0A0LAY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 9.9e-21
Identity = 51/74 (68.92%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 1   MPTRRDSTISMERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKA 60
           M TR DSTISM++IMLIYCI+EEIPVN+GEII +HI+AW+KHP   R F H I+KLCLKA
Sbjct: 106 MSTRPDSTISMDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKA 165

Query: 61  CLTLDKLPQVKVKD 75
           CLT  K  Q+KV+D
Sbjct: 166 CLT-KKESQIKVED 178

[Close]
BLAST of MELO3C013531 vs. TrEMBL
Match: A0A0A0LHW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-16
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1 

Query: 11 MERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKACLTLDKLPQV 70
          MERIM  YCI++EI VNIG+IISEHI+AWVK P+  R F H I+KL LKACL L+KLPQV
Sbjct: 1  MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 71 KVKDEV 77
          KV+D V
Sbjct: 61 KVEDGV 66

[Close]
BLAST of MELO3C013531 vs. NCBI nr
Match: gi|700202594|gb|KGN57727.1| (hypothetical protein Csa_3G263250 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 9.8e-22
Identity = 53/76 (69.74%), Postives = 66/76 (86.84%), Query Frame = 1 

Query: 1   MPTRRDSTISMERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKA 60
           MPTR  STISMER+ML+YCI+++I VNIG+IIS HIIA VKHPR AR FS+ I++LCL+A
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  CLTLDKLPQVKVKDEV 77
           CL L+KLPQV+VKD +
Sbjct: 98  CLMLEKLPQVEVKDGI 113

[Close]
BLAST of MELO3C013531 vs. NCBI nr
Match: gi|700202971|gb|KGN58104.1| (hypothetical protein Csa_3G511970 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-20
Identity = 51/74 (68.92%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 1   MPTRRDSTISMERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKA 60
           M TR DSTISM++IMLIYCI+EEIPVN+GEII +HI+AW+KHP   R F H I+KLCLKA
Sbjct: 106 MSTRPDSTISMDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKA 165

Query: 61  CLTLDKLPQVKVKD 75
           CLT  K  Q+KV+D
Sbjct: 166 CLT-KKESQIKVED 178

[Close]
BLAST of MELO3C013531 vs. NCBI nr
Match: gi|700206371|gb|KGN61490.1| (hypothetical protein Csa_2G145890 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-16
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1 

Query: 11 MERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKACLTLDKLPQV 70
          MERIM  YCI++EI VNIG+IISEHI+AWVK P+  R F H I+KL LKACL L+KLPQV
Sbjct: 1  MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 71 KVKDEV 77
          KV+D V
Sbjct: 61 KVEDGV 66

The following BLAST results are available for this feature:
BLAST of MELO3C013531 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAN0_CUCSA6.9e-2269.74Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1[more]
A0A0A0LAY9_CUCSA9.9e-2168.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1[more]
A0A0A0LHW9_CUCSA1.1e-1669.70Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1[more]
BLAST of MELO3C013531 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202594|gb|KGN57727.1|9.8e-2269.74hypothetical protein Csa_3G263250 [Cucumis sativus][more]
gi|700202971|gb|KGN58104.1|1.4e-2068.92hypothetical protein Csa_3G511970 [Cucumis sativus][more]
gi|700206371|gb|KGN61490.1|1.6e-1669.70hypothetical protein Csa_2G145890 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013531T1MELO3C013531T1mRNA