BLAST of MELO3C013341 vs. Swiss-Prot
Match:
LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 8.4e-11
Identity = 51/193 (26.42%), Postives = 89/193 (46.11%), Query Frame = 1
Query: 126 PLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIR 185
PLSP LF +V+EVL+R + + + E+VKL+ FADD++++ S + +
Sbjct: 662 PLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLS--LFADDMIVYLENPIVSAQNLL 721
Query: 186 ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLL--TGR 245
+ + F ++SG N +KS F+ N + SQ+ + F + ++YLG+ L
Sbjct: 722 KLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKD 781
Query: 246 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW--ASVFVLPAYVHNE 305
L + P+++ I W S+ GR+ +V + +Y A LP E
Sbjct: 782 LFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTE 841
Query: 306 VDKILRSYLWRGK 315
++K ++W K
Sbjct: 842 LEKTTLKFIWNQK 852
HSP 2 Score: 60.8 bits (146), Expect = 3.9e-08
Identity = 79/387 (20.41%), Postives = 137/387 (35.40%), Query Frame = 1
Query: 5 KAPGSDGFSVGFFKGVNA-------------------------TAITLIPKHN-GAKRLE 64
K+PG DGF+ F++ +I LIPK + E
Sbjct: 469 KSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKE 528
Query: 65 DFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHL 124
+FRPIS N+ K ++KIL +R+ + I +Q FI G NI ++ +
Sbjct: 529 NFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINR 588
Query: 125 NSGKPRCTLKVDLQKAYDSVNWIIFCNPLSPF----LFVMVMEVL-----------SRML 184
K + +D +KA+D + L+ +++ ++ + + L
Sbjct: 589 AKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKL 648
Query: 185 NKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAA--DEPSIRFIR---------------- 244
P C L+ L F L + A E I+ I+
Sbjct: 649 EAFPLKTGTRQGC---PLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMI 708
Query: 245 --------------ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLP 304
+ + F ++SG N +KS F+ N + SQ+ + F +
Sbjct: 709 VYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKR 768
Query: 305 VRYLGLPLL--TGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW- 315
++YLG+ L L + P+++ I W S+ GR+ +V + +Y
Sbjct: 769 IKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRF 828
BLAST of MELO3C013341 vs. Swiss-Prot
Match:
LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)
HSP 1 Score: 67.0 bits (162), Expect = 5.4e-10
Identity = 49/194 (25.26%), Postives = 89/194 (45.88%), Query Frame = 1
Query: 126 PLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIR 185
PLSP+LF +V+EVL+R + + + E+VK++ L ADD++++ + + S R +
Sbjct: 669 PLSPYLFNIVLEVLARAIRQQKEIKGIQIGKEEVKISLL--ADDMIVYISDPKNSTRELL 728
Query: 186 ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLL--TGR 245
+ FGE+ G N KS F+ N + ++ F ++YLG+ L
Sbjct: 729 NLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTNNIKYLGVTLTKEVKD 788
Query: 246 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW--ASVFVLPAYVHNE 305
L + + + I +R W S+ GR+ +V + +Y A +P NE
Sbjct: 789 LYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAILPKAIYRFNAIPIKIPTQFFNE 848
Query: 306 VDKILRSYLWRGKE 316
++ + ++W K+
Sbjct: 849 LEGAICKFVWNNKK 860
HSP 2 Score: 50.8 bits (120), Expect = 4.0e-05
Identity = 38/140 (27.14%), Postives = 58/140 (41.43%), Query Frame = 1
Query: 5 KAPGSDGFSVGFFKGVNA-------------------------TAITLIPK-HNGAKRLE 64
K+PG DGFS F++ ITLIPK ++E
Sbjct: 476 KSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIE 535
Query: 65 DFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHL 119
+FRPIS N+ K ++KIL +R+ + + I +Q FI G NI ++ +
Sbjct: 536 NFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINK 595
BLAST of MELO3C013341 vs. Swiss-Prot
Match:
LIN1_NYCCO (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 7.8e-09
Identity = 49/194 (25.26%), Postives = 90/194 (46.39%), Query Frame = 1
Query: 126 PLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIR 185
PLSP LF +VMEVL+ + + H E++KL+ FADD++++ S +
Sbjct: 661 PLSPLLFNIVMEVLAIAIREEKAIKGIHIGSEEIKLS--LFADDMIVYLENTRDSTTKLL 720
Query: 186 ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLL--TGR 245
E ++++ +SG N KS F+ NN+ + + F ++YLG+ L
Sbjct: 721 EVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKTVKDSIPFTVVPKKMKYLGVYLTKDVKD 780
Query: 246 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLV-CSVL-RSLQVYWASVFVLPAYVHNE 305
L + + + I + W S+ GR+ +V S+L +++ + A P +
Sbjct: 781 LYKENYETLRKEIAEDVNKWKNIPCSWLGRINIVKMSILPKAIYNFNAIPIKAPLSYFKD 840
Query: 306 VDKILRSYLWRGKE 316
++KI+ ++W K+
Sbjct: 841 LEKIILHFIWNQKK 852
BLAST of MELO3C013341 vs. TrEMBL
Match:
O64612_ARATH (Putative reverse transcriptase OS=Arabidopsis thaliana GN=At2g18820 PE=4 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 1.6e-77
Identity = 166/398 (41.71%), Postives = 223/398 (56.03%), Query Frame = 1
Query: 5 KAPGSDGFSVGFF-------------------------KGVNATAITLIPKHNGAKRLED 64
K+PG DG++V FF KG+N+T + LIPK AK ++D
Sbjct: 735 KSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKD 794
Query: 65 FRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLN 124
+RPISCCNVLYK ISK+L +RL LP FI+ NQSAFI R ++EN+LL ELV YH +
Sbjct: 795 YRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKD 854
Query: 125 SGKPRCTLKVDLQKAYDSVNWIIFCNPL-------------------------------- 184
PRC +K+DL KA+DSV W N L
Sbjct: 855 GLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNGLRQG 914
Query: 185 ---SPFLFVMVMEVLSRMLNK--IPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIR 244
SP+LFV+ M VLS ML+K + + F +H RC + LTHL FADD+M+F A S+
Sbjct: 915 CSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLE 974
Query: 245 FIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTG 304
+ + F SGL + KS +F+A +++E + + A F G+LPVRYLGLPL+T
Sbjct: 975 GVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTK 1034
Query: 305 RLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEV 341
R+ DC P++++I SRI SW R LS+AGRLQL+ SV+ SL +W S F LP E+
Sbjct: 1035 RMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREI 1094
BLAST of MELO3C013341 vs. TrEMBL
Match:
Q9LRQ9_ARATH (Reverse transcriptase-like protein OS=Arabidopsis thaliana PE=3 SV=1)
HSP 1 Score: 282.3 bits (721), Expect = 9.1e-73
Identity = 170/419 (40.57%), Postives = 233/419 (55.61%), Query Frame = 1
Query: 14 VGFF-KGVNATAITLIPKHNGAKRLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSN 73
+GF KGVN+T + LIPK +K + D+RPISCCNVLYK ISKI+ +RL LP FIS N
Sbjct: 467 IGFLPKGVNSTILALIPKKKESKEMRDYRPISCCNVLYKVISKIIANRLKRILPKFISGN 526
Query: 74 QSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWIIFCNPLSPFLF 133
QSAF+ R +IEN+LL ELV YH S + + +L + S I LSP+LF
Sbjct: 527 QSAFVKDRLLIENVLLATELVKDYHKTSFSVQ--VNGELAGYFRSARGIRQGCALSPYLF 586
Query: 134 VMVMEVLSRMLNKIP--QSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIRECLQK 193
V+ MEVLS+ML++ + F FH +C+ + LTHL FADDLMI S+ I E +
Sbjct: 587 VISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNL 646
Query: 194 FGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCA 253
F + SGL N K+ ++ AGV++ N + + F LPVRYLGLPL+T RL D +
Sbjct: 647 FAKRSGLKINMEKTTLYTAGVSDHNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLS 706
Query: 254 PMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYL 313
P+ ++I +RI +W +R LSFAGRL L+ SVL S +W S F LP+ E++ I ++L
Sbjct: 707 PLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFL 766
Query: 314 WRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLKIL---------------- 373
W G E R KV+W D+C P ++G L +R N+ S LK++
Sbjct: 767 WSGPELNRRKAKVSWDDICKP-KQGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSK 826
Query: 374 -----------------VGRSWCLRAILRKREKLKHHVRMKVGNGNRCRVWLDPWLHWG 397
+G SW + +L+ RE K R++V NG R W D W G
Sbjct: 827 MNLLKQESFWSLKPNSSLG-SWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMG 881
BLAST of MELO3C013341 vs. TrEMBL
Match:
F4NCG1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 4.3e-54
Identity = 150/440 (34.09%), Postives = 215/440 (48.86%), Query Frame = 1
Query: 5 KAPGSDGFSVGFFKG-------------------------VNATAITLIPKHNGAKRLED 64
KAPG DGF+ FFK +N +TL+PK A R+++
Sbjct: 454 KAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKE 513
Query: 65 FRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLN 124
FRPI+CC V+YK ISK+L +R+ + ++ QS FI GR I +NILL EL+ GY
Sbjct: 514 FRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRK 573
Query: 125 SGKPRCTLKVDLQKAYDSVNWIIFCNPLSPFLFV-----MVMEVLSR-----MLNKIP-Q 184
PRC +KVD++KAYDSV W L F F +ME +S ++N IP Q
Sbjct: 574 HMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQ 633
Query: 185 SFQFH---HRCEKVKLTHLTFADDLMIFCAAD---EPSIRFIRECLQK------------ 244
FQ + + + + + C + P F +C +
Sbjct: 634 PFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLL 693
Query: 245 -------------------FGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLP 304
F SGL A+ KS I+ GV++E A +LA + G LP
Sbjct: 694 MFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELP 753
Query: 305 VRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASV 364
RYLG+PL + +L C P+++ IT+R ++W+A++LS+AGRLQL+ S+L S+Q YWA +
Sbjct: 754 FRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHI 813
Query: 365 FVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTL 372
F L V V+K+ R +LW GK E VAW + P G ++ + WN A+ L
Sbjct: 814 FPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAML 873
BLAST of MELO3C013341 vs. TrEMBL
Match:
Q9ZUF0_ARATH (Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g05980 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 152/465 (32.69%), Postives = 222/465 (47.74%), Query Frame = 1
Query: 2 DSGKAPGSDGFSVGFFK-------------------------GVNATAITLIPKHNGAKR 61
++ K+PG DG++V FFK G+N T + LI K +
Sbjct: 613 EAHKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEVSG 672
Query: 62 LEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGY 121
++D+RPISCCNVLYK +SK++ +RL LP+ I+ NQSAFI R ++EN+LL ELV Y
Sbjct: 673 MKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDY 732
Query: 122 HLNSGKPRCTLKVDLQKAYDSVNWIIFCNPLS----PFLFVMVMEV---LSRMLNKIPQS 181
H S R LK+D+ KA+D V W N L P +F+ +E+ + ++
Sbjct: 733 HKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGE 792
Query: 182 FQFHHRCEKVKLTHLTFADDLMIFC----------AADEPSIRFIREC------------ 241
R E+ + + L + C AA E I + C
Sbjct: 793 LSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFAD 852
Query: 242 -LQKFGE-----LSGLFA-------------NPRKSFIFVAGVNNENASQLAACMGFVRG 301
+ F + + G A + KS IF+AG++ + + F G
Sbjct: 853 DIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELG 912
Query: 302 NLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW 361
LPV+YLGLPLLT R+ +D P++++I +RI SW R LSFAGRLQL+ SVL S+ +W
Sbjct: 913 TLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFW 972
Query: 362 ASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIA 394
SVF LP E++K+ ++LW G + K+AW +VC EEG L ++ N
Sbjct: 973 LSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEV 1032
BLAST of MELO3C013341 vs. TrEMBL
Match:
A0A0V0IYZ4_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 102/248 (41.13%), Postives = 150/248 (60.48%), Query Frame = 1
Query: 125 NPLSPFLFVMVMEVLSRMLNKIPQS-FQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRF 184
+PLSP+LFV+ ME +R+L + S F+FH RC K ++ L+FADDL++FC D S
Sbjct: 294 DPLSPYLFVLAMEYFTRLLKSLRDSKFKFHPRCHKQQIIQLSFADDLLLFCRGDVQSTVL 353
Query: 185 IRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGR 244
+ EC Q+F ++SGL AN KS ++ GV+ + + GF +GNLP RYLG+PL + +
Sbjct: 354 LYECFQQFSQVSGLIANQAKSCVYFGGVSKQEQQLILQHTGFTKGNLPFRYLGVPLSSKK 413
Query: 245 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVD 304
L + C P++ R+ I +W + LS+AGRLQLV SVL S+Q +WA +F+LP V +V+
Sbjct: 414 LSISQCQPLLDRMLGIINTWTVKFLSYAGRLQLVQSVLTSIQAFWAQIFLLPKKVFQQVE 473
Query: 305 KILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLKILVGRSWCLRA 364
I + +LW G + + VAW +C G L+I D WN A+ L L W L
Sbjct: 474 AICKRFLWNGDTQTKGKALVAWDTICCLKVAGGLNITDVYVWNKAAILNYL----WDL-- 533
Query: 365 ILRKREKL 372
+K++KL
Sbjct: 534 -AKKKDKL 534
BLAST of MELO3C013341 vs. TAIR10
Match:
AT3G24255.1 (AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)
HSP 1 Score: 146.0 bits (367), Expect = 5.2e-35
Identity = 78/191 (40.84%), Postives = 104/191 (54.45%), Query Frame = 1
Query: 208 VAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARV 267
+AGV + + + + F G LPVRYLGLPLLT ++ ++D P++++I RI W AR
Sbjct: 1 MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60
Query: 268 LSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVD 327
LSFAGRLQL+ SV+ SL +W S F LP+ E+D I S+LW G E KVAW D
Sbjct: 61 LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSD 120
Query: 328 VCLPFEEGDLDIRD------GPSWNIASTLKILVGRSWCLRAILRKREKLKHHVRMKVGN 387
VC P +EG L IR G W+I+ + SW + IL+ R V+ + N
Sbjct: 121 VCTPKDEGGLGIRSLKEANKGSFWSISGNTTL---GSWMWKKILKHRALASGFVKHDIHN 180
Query: 388 GNRCRVWLDPW 393
G+ W D W
Sbjct: 181 GSNTSFWFDNW 188
BLAST of MELO3C013341 vs. TAIR10
Match:
AT1G43760.1 (AT1G43760.1 DNAse I-like superfamily protein)
HSP 1 Score: 54.3 bits (129), Expect = 2.0e-07
Identity = 32/79 (40.51%), Postives = 35/79 (44.30%), Query Frame = 1
Query: 1 MDSGKAPGSDGFSVGFF-------------------------KGVNATAITLIPKHNGAK 55
M KAPG D F+ FF K NATAITLIPK G
Sbjct: 543 MPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVD 602
BLAST of MELO3C013341 vs. NCBI nr
Match:
gi|659102432|ref|XP_008452126.1| (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])
HSP 1 Score: 532.3 bits (1370), Expect = 7.3e-148
Identity = 298/447 (66.67%), Postives = 313/447 (70.02%), Query Frame = 1
Query: 1 MDSGKAPGSDGFSVGFFKG-------------------------VNATAITLIPKHNGAK 60
MDSGKAPG DGFSVGFFKG VNATAITLIPKHNGA+
Sbjct: 338 MDSGKAPGPDGFSVGFFKGAWSVIGEDFCDAVLHFFETYYLPVGVNATAITLIPKHNGAE 397
Query: 61 RLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGG 120
RLEDFRPISCCNVLYKCISKIL DRL VWLPSFISSNQSAFILGRSIIENILLCQELVGG
Sbjct: 398 RLEDFRPISCCNVLYKCISKILADRLRVWLPSFISSNQSAFILGRSIIENILLCQELVGG 457
Query: 121 YHLNSGKPRCTLKVDLQKAYDSVNWIIFC-----------------NPLSPFLFVMVMEV 180
YHLNSGKPRCTLKVDLQKAYDSVNW +PLS FLFVMVMEV
Sbjct: 458 YHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLQISISTPLKKGVRQGDPLSLFLFVMVMEV 517
Query: 181 LSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLF 240
LSRMLNKIPQSFQFHHRCEK +FGELSGLF
Sbjct: 518 LSRMLNKIPQSFQFHHRCEK-------------------------------RFGELSGLF 577
Query: 241 ANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITS 300
ANPRKS IF+AGVNNENAS+LAACMGFVRGNLPVRYLGLPLLTGRLRSNDC P+IQRITS
Sbjct: 578 ANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRITS 637
Query: 301 RIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILR-SYLWRGKEEG 360
RIRS ARVLSFAGRLQLVCSVL SLQVYWA VFVLPAYVHNE +R W+
Sbjct: 638 RIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEGGLGIRDGTAWKFAST- 697
Query: 361 RLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLK--------ILVGRSWCLRAILRKRE 397
+K+ W+ + G L + +W A LK VGRSWCLRAILRK+E
Sbjct: 698 ---LKILWL---MLTNSGSLWV----AWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQE 742
BLAST of MELO3C013341 vs. NCBI nr
Match:
gi|659126450|ref|XP_008463188.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])
HSP 1 Score: 498.0 bits (1281), Expect = 1.5e-137
Identity = 261/335 (77.91%), Postives = 266/335 (79.40%), Query Frame = 1
Query: 110 DLQKAYDSVNWIIFC-----------------NPLSPFLFVMVMEVLSRMLNKIPQSFQF 169
DLQKAYDSVNW +PLSPFLFVMVMEVLSRMLNKIPQSFQF
Sbjct: 48 DLQKAYDSVNWDFLFGLLIAIGTLLKKGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQF 107
Query: 170 HHRCEKVKLTHLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSFIFVAGVN 229
HHRCEKVKLTHLTFADDLMIFCAADE SIRFIR+CLQKFGELSGLFANPRKS IFVAGVN
Sbjct: 108 HHRCEKVKLTHLTFADDLMIFCAADELSIRFIRDCLQKFGELSGLFANPRKSSIFVAGVN 167
Query: 230 NENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAG 289
NENAS LAACMGFVRGNL VRYLGLPLLTGRL SNDCAP+IQRITS+IRSW ARVLSFAG
Sbjct: 168 NENASHLAACMGFVRGNLSVRYLGLPLLTGRLCSNDCAPLIQRITSQIRSWTARVLSFAG 227
Query: 290 RLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPF 349
R+QLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGR GIKVAWVDVCLPF
Sbjct: 228 RMQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPF 287
Query: 350 EEGDLDIRDGPSWNIASTLKIL------VGRSWCLR------------------------ 397
EEG L IRDGPSWNIASTLKIL G W
Sbjct: 288 EEGGLGIRDGPSWNIASTLKILWLMLTNSGSLWVAWVEAYILKRRSLWDVDSRVGRSWCL 347
BLAST of MELO3C013341 vs. NCBI nr
Match:
gi|659126450|ref|XP_008463188.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])
HSP 1 Score: 84.0 bits (206), Expect = 6.8e-13
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 1
Query: 1 MDSGKAPGSDGFSVGFFK-GVNATAITLIPKHNGAKRLEDFRPISC 46
MDSGKAPG DGFS+GFFK VNATAITLIPKHNGA+RLEDFRPISC
Sbjct: 1 MDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDFRPISC 46
HSP 2 Score: 464.5 bits (1194), Expect = 1.9e-127
Identity = 244/303 (80.53%), Postives = 247/303 (81.52%), Query Frame = 1
Query: 125 NPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFI 184
+PLS FLFVMVMEVLSRMLNKIPQSF FHHRCEKVKLTHLTFADDLMIFCAA+EPSIRFI
Sbjct: 24 DPLSTFLFVMVMEVLSRMLNKIPQSFHFHHRCEKVKLTHLTFADDLMIFCAANEPSIRFI 83
Query: 185 RECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRL 244
RECLQKFGELSGLFANPRKS IFVAGVNNENAS LA CMGFVRGNL VRYLGLPLL GRL
Sbjct: 84 RECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNLSVRYLGLPLLAGRL 143
Query: 245 RSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDK 304
RSND AP+IQRITSRIRSW ARVLSFAGRLQLV SVLRS QVYWASVFVLPAYVHNEVDK
Sbjct: 144 RSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWASVFVLPAYVHNEVDK 203
Query: 305 ILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLKIL------VGRS 364
ILRSYLWRGKEEGR GIKVAWVDVCLPFEEG L IRDGPSWNIASTLKIL G
Sbjct: 204 ILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSL 263
Query: 365 WCLR-------------------------AILRKREKLKHHVRMKVGNGNRCRVWLDPWL 397
W AILRKREKLKH VRMKVGNGN RVWLDPWL
Sbjct: 264 WVAWVEAYILKGRSLWDVDSRVGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWL 323
BLAST of MELO3C013341 vs. NCBI nr
Match:
gi|685299360|ref|XP_009140437.1| (PREDICTED: uncharacterized protein LOC103864439 [Brassica rapa])
HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 174/503 (34.59%), Postives = 249/503 (49.50%), Query Frame = 1
Query: 1 MDSGKAPGSDGFSVGFFK-------------------------GVNATAITLIPKHNGAK 60
++ K+PG DG + GFFK NAT +TL+PK GA
Sbjct: 330 LNQNKSPGPDGLTSGFFKHAWQVVGAEFIRSIQSFFVSGFLPPAANATILTLVPKTIGAS 389
Query: 61 RLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGG 120
+ D+RPISCCN ++K ISK+LV RL LPS I NQ+AFI GR ++EN +L E++ G
Sbjct: 390 AITDYRPISCCNTIFKVISKLLVKRLKPLLPSLILPNQTAFIQGRLLVENTVLASEIIHG 449
Query: 121 YHLNSGKPRCTLKVDLQKAYDSVNWIIFCN------------------------------ 180
YH + G R TLKVD+ KA+D+VNW N
Sbjct: 450 YHKDRGPKRITLKVDIAKAFDTVNWNFIFNLLQDLDIPHDFLAWAYPCVTTPSFMIGFNG 509
Query: 181 ----------------PLSPFLFVMVMEVLSRMLNKIPQS--FQFHHRCEKVKLTHLTFA 240
PLSP+LFV+ M LS +LNK + F +HH C + KLTHL FA
Sbjct: 510 TVQGYFRSNRGLRQGDPLSPYLFVIAMNYLSLLLNKAAEEGEFGYHHHCRESKLTHLCFA 569
Query: 241 DDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVR 300
DDL+IFC S++ I L +F +SGL N K+ F G+ +Q+ G +
Sbjct: 570 DDLLIFCDGSVNSVKNILSVLDRFALVSGLSVNISKTSFFTCGLTPAEVAQITTETGLTQ 629
Query: 301 GNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVY 360
LPVRYLG+PL T +L ++C P+IQ++ ++ SW A+ LSFAGRL L+ V+ + +
Sbjct: 630 DTLPVRYLGVPLCTKKLSLSNCEPLIQQVKQKVNSWTAKSLSFAGRLLLINIVIAGISNF 689
Query: 361 WASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNI 398
W + F +P N ++ + +YLWRG EG +VAW + L EG L +RD WN
Sbjct: 690 WCATFTIPKQCINAINSLCGAYLWRGTTEGHHSARVAWETITLSKAEGGLGVRDLVHWNR 749
BLAST of MELO3C013341 vs. NCBI nr
Match:
gi|4185148|gb|AAD08951.1| (putative reverse transcriptase [Arabidopsis thaliana])
HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 166/398 (41.71%), Postives = 223/398 (56.03%), Query Frame = 1
Query: 5 KAPGSDGFSVGFF-------------------------KGVNATAITLIPKHNGAKRLED 64
K+PG DG++V FF KG+N+T + LIPK AK ++D
Sbjct: 735 KSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKD 794
Query: 65 FRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLN 124
+RPISCCNVLYK ISK+L +RL LP FI+ NQSAFI R ++EN+LL ELV YH +
Sbjct: 795 YRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKD 854
Query: 125 SGKPRCTLKVDLQKAYDSVNWIIFCNPL-------------------------------- 184
PRC +K+DL KA+DSV W N L
Sbjct: 855 GLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNGLRQG 914
Query: 185 ---SPFLFVMVMEVLSRMLNK--IPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIR 244
SP+LFV+ M VLS ML+K + + F +H RC + LTHL FADD+M+F A S+
Sbjct: 915 CSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLE 974
Query: 245 FIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTG 304
+ + F SGL + KS +F+A +++E + + A F G+LPVRYLGLPL+T
Sbjct: 975 GVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTK 1034
Query: 305 RLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEV 341
R+ DC P++++I SRI SW R LS+AGRLQL+ SV+ SL +W S F LP E+
Sbjct: 1035 RMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREI 1094
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
LORF2_HUMAN | 8.4e-11 | 26.42 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1 | [more] |
LORF2_MOUSE | 5.4e-10 | 25.26 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2 | [more] |
LIN1_NYCCO | 7.8e-09 | 25.26 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
O64612_ARATH | 1.6e-77 | 41.71 | Putative reverse transcriptase OS=Arabidopsis thaliana GN=At2g18820 PE=4 SV=1 | [more] |
Q9LRQ9_ARATH | 9.1e-73 | 40.57 | Reverse transcriptase-like protein OS=Arabidopsis thaliana PE=3 SV=1 | [more] |
F4NCG1_BETVU | 4.3e-54 | 34.09 | Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1 | [more] |
Q9ZUF0_ARATH | 1.1e-52 | 32.69 | Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=A... | [more] |
A0A0V0IYZ4_SOLCH | 1.3e-47 | 41.13 | Putative ovule protein OS=Solanum chacoense PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G24255.1 | 5.2e-35 | 40.84 | RNA-directed DNA polymerase (reverse transcriptase)-related family p... | [more] |
AT1G43760.1 | 2.0e-07 | 40.51 | DNAse I-like superfamily protein | [more] |