MELO3C013341 (gene) Melon (DHL92) v3.5.1

NameMELO3C013341
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative reverse transcriptase
Locationchr1 : 15905821 .. 15907355 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTGGAAAGGCTCCTGGTTCTGATGGGTTCTCTGTAGGTTTCTTCAAAGGTGCCTGGTTTGTGGTTGGGGAAGATTTTTGTGATGCGGTTTTACATTTCTTTGAGACCTGTTATCTTCCAGTAGGAGTTAATGCTACTGCTATTACCCTCATTCCTAAACATAATGGGGCTAAGCGTTTGGAGGACTTTCGACCTATTTCTTGTTGTAATGTGTTATATAAATGCATTTCTAAAATTTTGGTTGATAGACTTCATGTGTGGCTTCCTTCTTTTATCAGTAGTAACCAGTCTGCTTTTATACTTGGGAGGAGTATTATCGAGAACATCTTGCTTTGTCAGGAACTGGTAGGAGGTTATCATCTTAATTCTGGTAAACCTCGATGTACTTTGAAAGTTGATCTTCAAAAAGCATATGACTCTGTTAATTGGATTATTTTCTGTTTGGTTTGCTGATTGCTATTGGCACTCCTTTGAAGTTTGTGAGTTGGATTAGGACCTGTGTTACTTCCCCTATGTTCTCTATTATGATTAATGGCTCGCTGGAGGGGGTTTTTCATGGCAGGAAGGATGTAAGACAAGGTAATCCTTTATCTCCTTTTCTTTTTGTTATGGTGATGGAAGTTCTTTCTCGTATGTTAAACAAGATTCCTCAGAGTTTTCAATTTCACCATCGTTGTGAAAAGGTGAAGTTAACTCATCTGACCTTCGCCGATGACCTTATGATATTTTGTGCTGCTGATGAGCCCTCTATCAGATTTATTCGAGAATGTCTTCAGAAGTTTGGTGAGCTTTCAGGTTTGTTTGCAAATCCTAGGAAAAGCTTTATTTTTGTTGCAGGAGTTAATAATGAGAATGCTTCTCAACTGGCTGCTTGTATGGGTTTTGTCCGTGGAAATCTCCCTGTTCGTTATCTTGGGCTTCCTCTTCTTACTGGTCGGTTACGTTCTAATGATTGTGCTCCTATGATTCAGCGTATCACTAGCCGGATTCGATCTTGGATTGCTCGAGTTCTTTCGTTTGCTGGTAGACTGCAGCTTGTTTGTTCTGTGCTTCGCAGCCTTCAAGTTTACTGGGCTAGTGTGTTTGTTCTTCCTGCGTATGTGCATAATGAGGTGGACAAAATTCTCAGATCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGATTAGGTATAAAGGTGGCGTGGGTGGATGTGTGTCTACCCTTTGAGGAGGGCGATCTTGATATTCGAGATGGCCCTTCTTGGAATATTGCGAGTACTTTGAAGATTTTGTGGCTTATGTTGACAAGTTTGGGTTCTCTTTGGGTGGCTTGGGTGGAGGCTTATATACTAAAGGGGAGGTCATTGTGGGATGTGGATAGTAGAGTGGGTCGTTCTTGGTGTCTTCGGGCGATCTTACGTAAGCGAGAGAAGTTGAAGCATCATGTGAGGATGAAGGTGGGAAATGGCAATAGATGTAGAGTTTGGCTTGATCCGTGGTTGCATTGGGGGTGCTATTCTGGAGCAGGTTGGGGAGAGAGTGCTTTATGA

mRNA sequence

ATGGATAGTGGAAAGGCTCCTGGTTCTGATGGGTTCTCTGTAGGTTTCTTCAAAGGAGTTAATGCTACTGCTATTACCCTCATTCCTAAACATAATGGGGCTAAGCGTTTGGAGGACTTTCGACCTATTTCTTGTTGTAATGTGTTATATAAATGCATTTCTAAAATTTTGGTTGATAGACTTCATGTGTGGCTTCCTTCTTTTATCAGTAGTAACCAGTCTGCTTTTATACTTGGGAGGAGTATTATCGAGAACATCTTGCTTTGTCAGGAACTGGTAGGAGGTTATCATCTTAATTCTGGTAAACCTCGATGTACTTTGAAAGTTGATCTTCAAAAAGCATATGACTCTGTTAATTGGATTATTTTCTGTAATCCTTTATCTCCTTTTCTTTTTGTTATGGTGATGGAAGTTCTTTCTCGTATGTTAAACAAGATTCCTCAGAGTTTTCAATTTCACCATCGTTGTGAAAAGGTGAAGTTAACTCATCTGACCTTCGCCGATGACCTTATGATATTTTGTGCTGCTGATGAGCCCTCTATCAGATTTATTCGAGAATGTCTTCAGAAGTTTGGTGAGCTTTCAGGTTTGTTTGCAAATCCTAGGAAAAGCTTTATTTTTGTTGCAGGAGTTAATAATGAGAATGCTTCTCAACTGGCTGCTTGTATGGGTTTTGTCCGTGGAAATCTCCCTGTTCGTTATCTTGGGCTTCCTCTTCTTACTGGTCGGTTACGTTCTAATGATTGTGCTCCTATGATTCAGCGTATCACTAGCCGGATTCGATCTTGGATTGCTCGAGTTCTTTCGTTTGCTGGTAGACTGCAGCTTGTTTGTTCTGTGCTTCGCAGCCTTCAAGTTTACTGGGCTAGTGTGTTTGTTCTTCCTGCGTATGTGCATAATGAGGTGGACAAAATTCTCAGATCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGATTAGGTATAAAGGTGGCGTGGGTGGATGTGTGTCTACCCTTTGAGGAGGGCGATCTTGATATTCGAGATGGCCCTTCTTGGAATATTGCGAGTACTTTGAAGATTTTAGTGGGTCGTTCTTGGTGTCTTCGGGCGATCTTACGTAAGCGAGAGAAGTTGAAGCATCATGTGAGGATGAAGGTGGGAAATGGCAATAGATGTAGAGTTTGGCTTGATCCGTGGTTGCATTGGGGGTGCTATTCTGGAGCAGGTTGGGGAGAGAGTGCTTTATGA

Coding sequence (CDS)

ATGGATAGTGGAAAGGCTCCTGGTTCTGATGGGTTCTCTGTAGGTTTCTTCAAAGGAGTTAATGCTACTGCTATTACCCTCATTCCTAAACATAATGGGGCTAAGCGTTTGGAGGACTTTCGACCTATTTCTTGTTGTAATGTGTTATATAAATGCATTTCTAAAATTTTGGTTGATAGACTTCATGTGTGGCTTCCTTCTTTTATCAGTAGTAACCAGTCTGCTTTTATACTTGGGAGGAGTATTATCGAGAACATCTTGCTTTGTCAGGAACTGGTAGGAGGTTATCATCTTAATTCTGGTAAACCTCGATGTACTTTGAAAGTTGATCTTCAAAAAGCATATGACTCTGTTAATTGGATTATTTTCTGTAATCCTTTATCTCCTTTTCTTTTTGTTATGGTGATGGAAGTTCTTTCTCGTATGTTAAACAAGATTCCTCAGAGTTTTCAATTTCACCATCGTTGTGAAAAGGTGAAGTTAACTCATCTGACCTTCGCCGATGACCTTATGATATTTTGTGCTGCTGATGAGCCCTCTATCAGATTTATTCGAGAATGTCTTCAGAAGTTTGGTGAGCTTTCAGGTTTGTTTGCAAATCCTAGGAAAAGCTTTATTTTTGTTGCAGGAGTTAATAATGAGAATGCTTCTCAACTGGCTGCTTGTATGGGTTTTGTCCGTGGAAATCTCCCTGTTCGTTATCTTGGGCTTCCTCTTCTTACTGGTCGGTTACGTTCTAATGATTGTGCTCCTATGATTCAGCGTATCACTAGCCGGATTCGATCTTGGATTGCTCGAGTTCTTTCGTTTGCTGGTAGACTGCAGCTTGTTTGTTCTGTGCTTCGCAGCCTTCAAGTTTACTGGGCTAGTGTGTTTGTTCTTCCTGCGTATGTGCATAATGAGGTGGACAAAATTCTCAGATCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGATTAGGTATAAAGGTGGCGTGGGTGGATGTGTGTCTACCCTTTGAGGAGGGCGATCTTGATATTCGAGATGGCCCTTCTTGGAATATTGCGAGTACTTTGAAGATTTTAGTGGGTCGTTCTTGGTGTCTTCGGGCGATCTTACGTAAGCGAGAGAAGTTGAAGCATCATGTGAGGATGAAGGTGGGAAATGGCAATAGATGTAGAGTTTGGCTTGATCCGTGGTTGCATTGGGGGTGCTATTCTGGAGCAGGTTGGGGAGAGAGTGCTTTATGA

Protein sequence

MDSGKAPGSDGFSVGFFKGVNATAITLIPKHNGAKRLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWIIFCNPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLKILVGRSWCLRAILRKREKLKHHVRMKVGNGNRCRVWLDPWLHWGCYSGAGWGESAL*
BLAST of MELO3C013341 vs. Swiss-Prot
Match: LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.4e-11
Identity = 51/193 (26.42%), Postives = 89/193 (46.11%), Query Frame = 1

Query: 126 PLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIR 185
           PLSP LF +V+EVL+R + +  +        E+VKL+   FADD++++      S + + 
Sbjct: 662 PLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLS--LFADDMIVYLENPIVSAQNLL 721

Query: 186 ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLL--TGR 245
           + +  F ++SG   N +KS  F+   N +  SQ+   + F   +  ++YLG+ L      
Sbjct: 722 KLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKD 781

Query: 246 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW--ASVFVLPAYVHNE 305
           L   +  P+++ I      W     S+ GR+ +V   +    +Y   A    LP     E
Sbjct: 782 LFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTE 841

Query: 306 VDKILRSYLWRGK 315
           ++K    ++W  K
Sbjct: 842 LEKTTLKFIWNQK 852


HSP 2 Score: 60.8 bits (146), Expect = 3.9e-08
Identity = 79/387 (20.41%), Postives = 137/387 (35.40%), Query Frame = 1

Query: 5   KAPGSDGFSVGFFKGVNA-------------------------TAITLIPKHN-GAKRLE 64
           K+PG DGF+  F++                              +I LIPK      + E
Sbjct: 469 KSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKE 528

Query: 65  DFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHL 124
           +FRPIS  N+  K ++KIL +R+   +   I  +Q  FI G     NI     ++   + 
Sbjct: 529 NFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINR 588

Query: 125 NSGKPRCTLKVDLQKAYDSVNWIIFCNPLSPF----LFVMVMEVL-----------SRML 184
              K    + +D +KA+D +        L+      +++ ++  +            + L
Sbjct: 589 AKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKL 648

Query: 185 NKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAA--DEPSIRFIR---------------- 244
              P        C    L+ L F   L +   A   E  I+ I+                
Sbjct: 649 EAFPLKTGTRQGC---PLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMI 708

Query: 245 --------------ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLP 304
                         + +  F ++SG   N +KS  F+   N +  SQ+   + F   +  
Sbjct: 709 VYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKR 768

Query: 305 VRYLGLPLL--TGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW- 315
           ++YLG+ L      L   +  P+++ I      W     S+ GR+ +V   +    +Y  
Sbjct: 769 IKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRF 828

BLAST of MELO3C013341 vs. Swiss-Prot
Match: LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 5.4e-10
Identity = 49/194 (25.26%), Postives = 89/194 (45.88%), Query Frame = 1

Query: 126 PLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIR 185
           PLSP+LF +V+EVL+R + +  +        E+VK++ L  ADD++++ +  + S R + 
Sbjct: 669 PLSPYLFNIVLEVLARAIRQQKEIKGIQIGKEEVKISLL--ADDMIVYISDPKNSTRELL 728

Query: 186 ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLL--TGR 245
             +  FGE+ G   N  KS  F+   N +   ++     F      ++YLG+ L      
Sbjct: 729 NLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTNNIKYLGVTLTKEVKD 788

Query: 246 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW--ASVFVLPAYVHNE 305
           L   +   + + I   +R W     S+ GR+ +V   +    +Y   A    +P    NE
Sbjct: 789 LYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAILPKAIYRFNAIPIKIPTQFFNE 848

Query: 306 VDKILRSYLWRGKE 316
           ++  +  ++W  K+
Sbjct: 849 LEGAICKFVWNNKK 860


HSP 2 Score: 50.8 bits (120), Expect = 4.0e-05
Identity = 38/140 (27.14%), Postives = 58/140 (41.43%), Query Frame = 1

Query: 5   KAPGSDGFSVGFFKGVNA-------------------------TAITLIPK-HNGAKRLE 64
           K+PG DGFS  F++                               ITLIPK      ++E
Sbjct: 476 KSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIE 535

Query: 65  DFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHL 119
           +FRPIS  N+  K ++KIL +R+   + + I  +Q  FI G     NI     ++   + 
Sbjct: 536 NFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINK 595

BLAST of MELO3C013341 vs. Swiss-Prot
Match: LIN1_NYCCO (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.8e-09
Identity = 49/194 (25.26%), Postives = 90/194 (46.39%), Query Frame = 1

Query: 126 PLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIR 185
           PLSP LF +VMEVL+  + +       H   E++KL+   FADD++++      S   + 
Sbjct: 661 PLSPLLFNIVMEVLAIAIREEKAIKGIHIGSEEIKLS--LFADDMIVYLENTRDSTTKLL 720

Query: 186 ECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLL--TGR 245
           E ++++  +SG   N  KS  F+   NN+    +   + F      ++YLG+ L      
Sbjct: 721 EVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKTVKDSIPFTVVPKKMKYLGVYLTKDVKD 780

Query: 246 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLV-CSVL-RSLQVYWASVFVLPAYVHNE 305
           L   +   + + I   +  W     S+ GR+ +V  S+L +++  + A     P     +
Sbjct: 781 LYKENYETLRKEIAEDVNKWKNIPCSWLGRINIVKMSILPKAIYNFNAIPIKAPLSYFKD 840

Query: 306 VDKILRSYLWRGKE 316
           ++KI+  ++W  K+
Sbjct: 841 LEKIILHFIWNQKK 852

BLAST of MELO3C013341 vs. TrEMBL
Match: O64612_ARATH (Putative reverse transcriptase OS=Arabidopsis thaliana GN=At2g18820 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.6e-77
Identity = 166/398 (41.71%), Postives = 223/398 (56.03%), Query Frame = 1

Query: 5    KAPGSDGFSVGFF-------------------------KGVNATAITLIPKHNGAKRLED 64
            K+PG DG++V FF                         KG+N+T + LIPK   AK ++D
Sbjct: 735  KSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKD 794

Query: 65   FRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLN 124
            +RPISCCNVLYK ISK+L +RL   LP FI+ NQSAFI  R ++EN+LL  ELV  YH +
Sbjct: 795  YRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKD 854

Query: 125  SGKPRCTLKVDLQKAYDSVNWIIFCNPL-------------------------------- 184
               PRC +K+DL KA+DSV W    N L                                
Sbjct: 855  GLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNGLRQG 914

Query: 185  ---SPFLFVMVMEVLSRMLNK--IPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIR 244
               SP+LFV+ M VLS ML+K  + + F +H RC  + LTHL FADD+M+F A    S+ 
Sbjct: 915  CSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLE 974

Query: 245  FIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTG 304
             +    + F   SGL  +  KS +F+A +++E  + + A   F  G+LPVRYLGLPL+T 
Sbjct: 975  GVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTK 1034

Query: 305  RLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEV 341
            R+   DC P++++I SRI SW  R LS+AGRLQL+ SV+ SL  +W S F LP     E+
Sbjct: 1035 RMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREI 1094

BLAST of MELO3C013341 vs. TrEMBL
Match: Q9LRQ9_ARATH (Reverse transcriptase-like protein OS=Arabidopsis thaliana PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.1e-73
Identity = 170/419 (40.57%), Postives = 233/419 (55.61%), Query Frame = 1

Query: 14  VGFF-KGVNATAITLIPKHNGAKRLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSN 73
           +GF  KGVN+T + LIPK   +K + D+RPISCCNVLYK ISKI+ +RL   LP FIS N
Sbjct: 467 IGFLPKGVNSTILALIPKKKESKEMRDYRPISCCNVLYKVISKIIANRLKRILPKFISGN 526

Query: 74  QSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWIIFCNPLSPFLF 133
           QSAF+  R +IEN+LL  ELV  YH  S   +  +  +L   + S   I     LSP+LF
Sbjct: 527 QSAFVKDRLLIENVLLATELVKDYHKTSFSVQ--VNGELAGYFRSARGIRQGCALSPYLF 586

Query: 134 VMVMEVLSRMLNKIP--QSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIRECLQK 193
           V+ MEVLS+ML++    + F FH +C+ + LTHL FADDLMI       S+  I E +  
Sbjct: 587 VISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNL 646

Query: 194 FGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCA 253
           F + SGL  N  K+ ++ AGV++ N   + +   F    LPVRYLGLPL+T RL   D +
Sbjct: 647 FAKRSGLKINMEKTTLYTAGVSDHNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLS 706

Query: 254 PMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYL 313
           P+ ++I +RI +W +R LSFAGRL L+ SVL S   +W S F LP+    E++ I  ++L
Sbjct: 707 PLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFL 766

Query: 314 WRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLKIL---------------- 373
           W G E  R   KV+W D+C P ++G L +R     N+ S LK++                
Sbjct: 767 WSGPELNRRKAKVSWDDICKP-KQGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSK 826

Query: 374 -----------------VGRSWCLRAILRKREKLKHHVRMKVGNGNRCRVWLDPWLHWG 397
                            +G SW  + +L+ RE  K   R++V NG R   W D W   G
Sbjct: 827 MNLLKQESFWSLKPNSSLG-SWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMG 881

BLAST of MELO3C013341 vs. TrEMBL
Match: F4NCG1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.3e-54
Identity = 150/440 (34.09%), Postives = 215/440 (48.86%), Query Frame = 1

Query: 5   KAPGSDGFSVGFFKG-------------------------VNATAITLIPKHNGAKRLED 64
           KAPG DGF+  FFK                          +N   +TL+PK   A R+++
Sbjct: 454 KAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKE 513

Query: 65  FRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLN 124
           FRPI+CC V+YK ISK+L +R+   +   ++  QS FI GR I +NILL  EL+ GY   
Sbjct: 514 FRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRK 573

Query: 125 SGKPRCTLKVDLQKAYDSVNWIIFCNPLSPFLFV-----MVMEVLSR-----MLNKIP-Q 184
              PRC +KVD++KAYDSV W      L  F F       +ME +S      ++N IP Q
Sbjct: 574 HMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQ 633

Query: 185 SFQFH---HRCEKVKLTHLTFADDLMIFCAAD---EPSIRFIRECLQK------------ 244
            FQ      + + +         + +  C  +    P   F  +C +             
Sbjct: 634 PFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLL 693

Query: 245 -------------------FGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLP 304
                              F   SGL A+  KS I+  GV++E A +LA  +    G LP
Sbjct: 694 MFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELP 753

Query: 305 VRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASV 364
            RYLG+PL + +L    C P+++ IT+R ++W+A++LS+AGRLQL+ S+L S+Q YWA +
Sbjct: 754 FRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHI 813

Query: 365 FVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTL 372
           F L   V   V+K+ R +LW GK E      VAW  +  P   G  ++ +   WN A+ L
Sbjct: 814 FPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAML 873

BLAST of MELO3C013341 vs. TrEMBL
Match: Q9ZUF0_ARATH (Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g05980 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 152/465 (32.69%), Postives = 222/465 (47.74%), Query Frame = 1

Query: 2    DSGKAPGSDGFSVGFFK-------------------------GVNATAITLIPKHNGAKR 61
            ++ K+PG DG++V FFK                         G+N T + LI K +    
Sbjct: 613  EAHKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEVSG 672

Query: 62   LEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGY 121
            ++D+RPISCCNVLYK +SK++ +RL   LP+ I+ NQSAFI  R ++EN+LL  ELV  Y
Sbjct: 673  MKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDY 732

Query: 122  HLNSGKPRCTLKVDLQKAYDSVNWIIFCNPLS----PFLFVMVMEV---LSRMLNKIPQS 181
            H  S   R  LK+D+ KA+D V W    N L     P +F+  +E+    +    ++   
Sbjct: 733  HKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGE 792

Query: 182  FQFHHRCEKVKLTHLTFADDLMIFC----------AADEPSIRFIREC------------ 241
                 R E+      + +  L + C          AA E  I +   C            
Sbjct: 793  LSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFAD 852

Query: 242  -LQKFGE-----LSGLFA-------------NPRKSFIFVAGVNNENASQLAACMGFVRG 301
             +  F +     + G  A             +  KS IF+AG++    + +     F  G
Sbjct: 853  DIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELG 912

Query: 302  NLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYW 361
             LPV+YLGLPLLT R+  +D  P++++I +RI SW  R LSFAGRLQL+ SVL S+  +W
Sbjct: 913  TLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFW 972

Query: 362  ASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIA 394
             SVF LP     E++K+  ++LW G +      K+AW +VC   EEG L ++     N  
Sbjct: 973  LSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEV 1032

BLAST of MELO3C013341 vs. TrEMBL
Match: A0A0V0IYZ4_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 102/248 (41.13%), Postives = 150/248 (60.48%), Query Frame = 1

Query: 125 NPLSPFLFVMVMEVLSRMLNKIPQS-FQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRF 184
           +PLSP+LFV+ ME  +R+L  +  S F+FH RC K ++  L+FADDL++FC  D  S   
Sbjct: 294 DPLSPYLFVLAMEYFTRLLKSLRDSKFKFHPRCHKQQIIQLSFADDLLLFCRGDVQSTVL 353

Query: 185 IRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGR 244
           + EC Q+F ++SGL AN  KS ++  GV+ +    +    GF +GNLP RYLG+PL + +
Sbjct: 354 LYECFQQFSQVSGLIANQAKSCVYFGGVSKQEQQLILQHTGFTKGNLPFRYLGVPLSSKK 413

Query: 245 LRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVD 304
           L  + C P++ R+   I +W  + LS+AGRLQLV SVL S+Q +WA +F+LP  V  +V+
Sbjct: 414 LSISQCQPLLDRMLGIINTWTVKFLSYAGRLQLVQSVLTSIQAFWAQIFLLPKKVFQQVE 473

Query: 305 KILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLKILVGRSWCLRA 364
            I + +LW G  + +    VAW  +C     G L+I D   WN A+ L  L    W L  
Sbjct: 474 AICKRFLWNGDTQTKGKALVAWDTICCLKVAGGLNITDVYVWNKAAILNYL----WDL-- 533

Query: 365 ILRKREKL 372
             +K++KL
Sbjct: 534 -AKKKDKL 534

BLAST of MELO3C013341 vs. TAIR10
Match: AT3G24255.1 (AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 146.0 bits (367), Expect = 5.2e-35
Identity = 78/191 (40.84%), Postives = 104/191 (54.45%), Query Frame = 1

Query: 208 VAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARV 267
           +AGV + + + +     F  G LPVRYLGLPLLT ++ ++D  P++++I  RI  W AR 
Sbjct: 1   MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60

Query: 268 LSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVD 327
           LSFAGRLQL+ SV+ SL  +W S F LP+    E+D I  S+LW G E      KVAW D
Sbjct: 61  LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSD 120

Query: 328 VCLPFEEGDLDIRD------GPSWNIASTLKILVGRSWCLRAILRKREKLKHHVRMKVGN 387
           VC P +EG L IR       G  W+I+    +    SW  + IL+ R      V+  + N
Sbjct: 121 VCTPKDEGGLGIRSLKEANKGSFWSISGNTTL---GSWMWKKILKHRALASGFVKHDIHN 180

Query: 388 GNRCRVWLDPW 393
           G+    W D W
Sbjct: 181 GSNTSFWFDNW 188

BLAST of MELO3C013341 vs. TAIR10
Match: AT1G43760.1 (AT1G43760.1 DNAse I-like superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-07
Identity = 32/79 (40.51%), Postives = 35/79 (44.30%), Query Frame = 1

Query: 1   MDSGKAPGSDGFSVGFF-------------------------KGVNATAITLIPKHNGAK 55
           M   KAPG D F+  FF                         K  NATAITLIPK  G  
Sbjct: 543 MPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVD 602

BLAST of MELO3C013341 vs. NCBI nr
Match: gi|659102432|ref|XP_008452126.1| (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])

HSP 1 Score: 532.3 bits (1370), Expect = 7.3e-148
Identity = 298/447 (66.67%), Postives = 313/447 (70.02%), Query Frame = 1

Query: 1   MDSGKAPGSDGFSVGFFKG-------------------------VNATAITLIPKHNGAK 60
           MDSGKAPG DGFSVGFFKG                         VNATAITLIPKHNGA+
Sbjct: 338 MDSGKAPGPDGFSVGFFKGAWSVIGEDFCDAVLHFFETYYLPVGVNATAITLIPKHNGAE 397

Query: 61  RLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGG 120
           RLEDFRPISCCNVLYKCISKIL DRL VWLPSFISSNQSAFILGRSIIENILLCQELVGG
Sbjct: 398 RLEDFRPISCCNVLYKCISKILADRLRVWLPSFISSNQSAFILGRSIIENILLCQELVGG 457

Query: 121 YHLNSGKPRCTLKVDLQKAYDSVNWIIFC-----------------NPLSPFLFVMVMEV 180
           YHLNSGKPRCTLKVDLQKAYDSVNW                     +PLS FLFVMVMEV
Sbjct: 458 YHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLQISISTPLKKGVRQGDPLSLFLFVMVMEV 517

Query: 181 LSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLF 240
           LSRMLNKIPQSFQFHHRCEK                               +FGELSGLF
Sbjct: 518 LSRMLNKIPQSFQFHHRCEK-------------------------------RFGELSGLF 577

Query: 241 ANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITS 300
           ANPRKS IF+AGVNNENAS+LAACMGFVRGNLPVRYLGLPLLTGRLRSNDC P+IQRITS
Sbjct: 578 ANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRITS 637

Query: 301 RIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILR-SYLWRGKEEG 360
           RIRS  ARVLSFAGRLQLVCSVL SLQVYWA VFVLPAYVHNE    +R    W+     
Sbjct: 638 RIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEGGLGIRDGTAWKFAST- 697

Query: 361 RLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLK--------ILVGRSWCLRAILRKRE 397
              +K+ W+   +    G L +    +W  A  LK          VGRSWCLRAILRK+E
Sbjct: 698 ---LKILWL---MLTNSGSLWV----AWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQE 742

BLAST of MELO3C013341 vs. NCBI nr
Match: gi|659126450|ref|XP_008463188.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 498.0 bits (1281), Expect = 1.5e-137
Identity = 261/335 (77.91%), Postives = 266/335 (79.40%), Query Frame = 1

Query: 110 DLQKAYDSVNWIIFC-----------------NPLSPFLFVMVMEVLSRMLNKIPQSFQF 169
           DLQKAYDSVNW                     +PLSPFLFVMVMEVLSRMLNKIPQSFQF
Sbjct: 48  DLQKAYDSVNWDFLFGLLIAIGTLLKKGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQF 107

Query: 170 HHRCEKVKLTHLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSFIFVAGVN 229
           HHRCEKVKLTHLTFADDLMIFCAADE SIRFIR+CLQKFGELSGLFANPRKS IFVAGVN
Sbjct: 108 HHRCEKVKLTHLTFADDLMIFCAADELSIRFIRDCLQKFGELSGLFANPRKSSIFVAGVN 167

Query: 230 NENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAG 289
           NENAS LAACMGFVRGNL VRYLGLPLLTGRL SNDCAP+IQRITS+IRSW ARVLSFAG
Sbjct: 168 NENASHLAACMGFVRGNLSVRYLGLPLLTGRLCSNDCAPLIQRITSQIRSWTARVLSFAG 227

Query: 290 RLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPF 349
           R+QLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGR GIKVAWVDVCLPF
Sbjct: 228 RMQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPF 287

Query: 350 EEGDLDIRDGPSWNIASTLKIL------VGRSWCLR------------------------ 397
           EEG L IRDGPSWNIASTLKIL       G  W                           
Sbjct: 288 EEGGLGIRDGPSWNIASTLKILWLMLTNSGSLWVAWVEAYILKRRSLWDVDSRVGRSWCL 347

BLAST of MELO3C013341 vs. NCBI nr
Match: gi|659126450|ref|XP_008463188.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 84.0 bits (206), Expect = 6.8e-13
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 1

Query: 1  MDSGKAPGSDGFSVGFFK-GVNATAITLIPKHNGAKRLEDFRPISC 46
          MDSGKAPG DGFS+GFFK  VNATAITLIPKHNGA+RLEDFRPISC
Sbjct: 1  MDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDFRPISC 46


HSP 2 Score: 464.5 bits (1194), Expect = 1.9e-127
Identity = 244/303 (80.53%), Postives = 247/303 (81.52%), Query Frame = 1

Query: 125 NPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIRFI 184
           +PLS FLFVMVMEVLSRMLNKIPQSF FHHRCEKVKLTHLTFADDLMIFCAA+EPSIRFI
Sbjct: 24  DPLSTFLFVMVMEVLSRMLNKIPQSFHFHHRCEKVKLTHLTFADDLMIFCAANEPSIRFI 83

Query: 185 RECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRL 244
           RECLQKFGELSGLFANPRKS IFVAGVNNENAS LA CMGFVRGNL VRYLGLPLL GRL
Sbjct: 84  RECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNLSVRYLGLPLLAGRL 143

Query: 245 RSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDK 304
           RSND AP+IQRITSRIRSW ARVLSFAGRLQLV SVLRS QVYWASVFVLPAYVHNEVDK
Sbjct: 144 RSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWASVFVLPAYVHNEVDK 203

Query: 305 ILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNIASTLKIL------VGRS 364
           ILRSYLWRGKEEGR GIKVAWVDVCLPFEEG L IRDGPSWNIASTLKIL       G  
Sbjct: 204 ILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSL 263

Query: 365 WCLR-------------------------AILRKREKLKHHVRMKVGNGNRCRVWLDPWL 397
           W                            AILRKREKLKH VRMKVGNGN  RVWLDPWL
Sbjct: 264 WVAWVEAYILKGRSLWDVDSRVGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWL 323

BLAST of MELO3C013341 vs. NCBI nr
Match: gi|685299360|ref|XP_009140437.1| (PREDICTED: uncharacterized protein LOC103864439 [Brassica rapa])

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 174/503 (34.59%), Postives = 249/503 (49.50%), Query Frame = 1

Query: 1   MDSGKAPGSDGFSVGFFK-------------------------GVNATAITLIPKHNGAK 60
           ++  K+PG DG + GFFK                           NAT +TL+PK  GA 
Sbjct: 330 LNQNKSPGPDGLTSGFFKHAWQVVGAEFIRSIQSFFVSGFLPPAANATILTLVPKTIGAS 389

Query: 61  RLEDFRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGG 120
            + D+RPISCCN ++K ISK+LV RL   LPS I  NQ+AFI GR ++EN +L  E++ G
Sbjct: 390 AITDYRPISCCNTIFKVISKLLVKRLKPLLPSLILPNQTAFIQGRLLVENTVLASEIIHG 449

Query: 121 YHLNSGKPRCTLKVDLQKAYDSVNWIIFCN------------------------------ 180
           YH + G  R TLKVD+ KA+D+VNW    N                              
Sbjct: 450 YHKDRGPKRITLKVDIAKAFDTVNWNFIFNLLQDLDIPHDFLAWAYPCVTTPSFMIGFNG 509

Query: 181 ----------------PLSPFLFVMVMEVLSRMLNKIPQS--FQFHHRCEKVKLTHLTFA 240
                           PLSP+LFV+ M  LS +LNK  +   F +HH C + KLTHL FA
Sbjct: 510 TVQGYFRSNRGLRQGDPLSPYLFVIAMNYLSLLLNKAAEEGEFGYHHHCRESKLTHLCFA 569

Query: 241 DDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVR 300
           DDL+IFC     S++ I   L +F  +SGL  N  K+  F  G+     +Q+    G  +
Sbjct: 570 DDLLIFCDGSVNSVKNILSVLDRFALVSGLSVNISKTSFFTCGLTPAEVAQITTETGLTQ 629

Query: 301 GNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVY 360
             LPVRYLG+PL T +L  ++C P+IQ++  ++ SW A+ LSFAGRL L+  V+  +  +
Sbjct: 630 DTLPVRYLGVPLCTKKLSLSNCEPLIQQVKQKVNSWTAKSLSFAGRLLLINIVIAGISNF 689

Query: 361 WASVFVLPAYVHNEVDKILRSYLWRGKEEGRLGIKVAWVDVCLPFEEGDLDIRDGPSWNI 398
           W + F +P    N ++ +  +YLWRG  EG    +VAW  + L   EG L +RD   WN 
Sbjct: 690 WCATFTIPKQCINAINSLCGAYLWRGTTEGHHSARVAWETITLSKAEGGLGVRDLVHWNR 749

BLAST of MELO3C013341 vs. NCBI nr
Match: gi|4185148|gb|AAD08951.1| (putative reverse transcriptase [Arabidopsis thaliana])

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 166/398 (41.71%), Postives = 223/398 (56.03%), Query Frame = 1

Query: 5    KAPGSDGFSVGFF-------------------------KGVNATAITLIPKHNGAKRLED 64
            K+PG DG++V FF                         KG+N+T + LIPK   AK ++D
Sbjct: 735  KSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKD 794

Query: 65   FRPISCCNVLYKCISKILVDRLHVWLPSFISSNQSAFILGRSIIENILLCQELVGGYHLN 124
            +RPISCCNVLYK ISK+L +RL   LP FI+ NQSAFI  R ++EN+LL  ELV  YH +
Sbjct: 795  YRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKD 854

Query: 125  SGKPRCTLKVDLQKAYDSVNWIIFCNPL-------------------------------- 184
               PRC +K+DL KA+DSV W    N L                                
Sbjct: 855  GLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNGLRQG 914

Query: 185  ---SPFLFVMVMEVLSRMLNK--IPQSFQFHHRCEKVKLTHLTFADDLMIFCAADEPSIR 244
               SP+LFV+ M VLS ML+K  + + F +H RC  + LTHL FADD+M+F A    S+ 
Sbjct: 915  CSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLE 974

Query: 245  FIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTG 304
             +    + F   SGL  +  KS +F+A +++E  + + A   F  G+LPVRYLGLPL+T 
Sbjct: 975  GVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTK 1034

Query: 305  RLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEV 341
            R+   DC P++++I SRI SW  R LS+AGRLQL+ SV+ SL  +W S F LP     E+
Sbjct: 1035 RMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREI 1094

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LORF2_HUMAN8.4e-1126.42LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1[more]
LORF2_MOUSE5.4e-1025.26LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2[more]
LIN1_NYCCO7.8e-0925.26LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1[more]
Match NameE-valueIdentityDescription
O64612_ARATH1.6e-7741.71Putative reverse transcriptase OS=Arabidopsis thaliana GN=At2g18820 PE=4 SV=1[more]
Q9LRQ9_ARATH9.1e-7340.57Reverse transcriptase-like protein OS=Arabidopsis thaliana PE=3 SV=1[more]
F4NCG1_BETVU4.3e-5434.09Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1[more]
Q9ZUF0_ARATH1.1e-5232.69Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=A... [more]
A0A0V0IYZ4_SOLCH1.3e-4741.13Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G24255.15.2e-3540.84 RNA-directed DNA polymerase (reverse transcriptase)-related family p... [more]
AT1G43760.12.0e-0740.51 DNAse I-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659102432|ref|XP_008452126.1|7.3e-14866.67PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo][more]
gi|659126450|ref|XP_008463188.1|1.5e-13777.91PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|659126450|ref|XP_008463188.1|6.8e-1389.13PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|685299360|ref|XP_009140437.1|2.2e-8034.59PREDICTED: uncharacterized protein LOC103864439 [Brassica rapa][more]
gi|4185148|gb|AAD08951.1|2.3e-7741.71putative reverse transcriptase [Arabidopsis thaliana][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013341T1MELO3C013341T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 28..120
score: 7.9E-18coord: 126..239
score: 5.3
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 1..272
score: 9.9
NoneNo IPR availablePANTHERPTHR19446:SF368SUBFAMILY NOT NAMEDcoord: 1..272
score: 9.9
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 1..208
score: 3.7

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013341Cucumber (Chinese Long) v3cucmeB106
MELO3C013341Cucumber (Chinese Long) v3cucmeB549
MELO3C013341Watermelon (97103) v2mewmbB179
MELO3C013341Watermelon (97103) v2mewmbB184
MELO3C013341Wax gourdmewgoB213
MELO3C013341Wax gourdmewgoB231
MELO3C013341Melon (DHL92) v3.5.1memeB038
MELO3C013341Cucumber (Gy14) v1cgymeB394
MELO3C013341Cucumber (Gy14) v1cgymeB603
MELO3C013341Cucurbita maxima (Rimu)cmameB092
MELO3C013341Cucurbita maxima (Rimu)cmameB462
MELO3C013341Cucurbita maxima (Rimu)cmameB510
MELO3C013341Cucurbita maxima (Rimu)cmameB565
MELO3C013341Cucurbita moschata (Rifu)cmomeB091
MELO3C013341Cucurbita moschata (Rifu)cmomeB453
MELO3C013341Cucurbita moschata (Rifu)cmomeB503
MELO3C013341Cucurbita moschata (Rifu)cmomeB554
MELO3C013341Wild cucumber (PI 183967)cpimeB102
MELO3C013341Wild cucumber (PI 183967)cpimeB539
MELO3C013341Cucumber (Chinese Long) v2cumeB104
MELO3C013341Cucumber (Chinese Long) v2cumeB531
MELO3C013341Watermelon (Charleston Gray)mewcgB196
MELO3C013341Watermelon (Charleston Gray)mewcgB201
MELO3C013341Watermelon (97103) v1mewmB239
MELO3C013341Watermelon (97103) v1mewmB247
MELO3C013341Cucurbita pepo (Zucchini)cpemeB224
MELO3C013341Cucurbita pepo (Zucchini)cpemeB272
MELO3C013341Cucurbita pepo (Zucchini)cpemeB610
MELO3C013341Bottle gourd (USVL1VR-Ls)lsimeB064
MELO3C013341Bottle gourd (USVL1VR-Ls)lsimeB096
MELO3C013341Cucumber (Gy14) v2cgybmeB088
MELO3C013341Cucumber (Gy14) v2cgybmeB469
MELO3C013341Silver-seed gourdcarmeB0321
MELO3C013341Silver-seed gourdcarmeB0353
MELO3C013341Silver-seed gourdcarmeB0801
MELO3C013341Silver-seed gourdcarmeB0988
MELO3C013341Silver-seed gourdcarmeB1031