MELO3C013298 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013298
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	NAD kinase 2
Location	chr1 : 15145705 .. 15146923 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCCTTTGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGTGGCTCCAGAAACAGTCGACAAAGTAGAGCTGACTGAAGTTTTGATTAAGGTGAAGGTTAACTACACGGGGTTTTTACCAGCATTTATTAAAATCTATGATGAAGAAGGAAGCGATTTCACTATCCATACAGTAACACATCTAGAAGAAAGATGGTTGAGAGAAAGGAACCCCAGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAAGTTTCAATGAATACAACCCACAAGCTGAACAATATACCTTTGATAGGAATCTCGCTGTTGTAAGTCAAAAAGACTCGTCGGAAACATCAAAGAGCAGAAACTACAAGATGAACACAAAAATTGGGCCTACAAAAATGAATAAAAAATTGAACAATGCTGTAAGTTTTTTGAATTTGAATTATGAGGGTGACAGCGACAACAGTAACCAATCAGAAAAGTGATGATAAAGCTGATAGTTGACATGACTGATAAGGAAAAAGGGAAACAAATCTGTCATGATGAATCTCCTCTTAAGCTTCCCCCTATCAACACAGAGAGAAAAGTCTCTTTTAGCTCCCAAAAAATGAAAATTTTCATTATACCCAAAACGCCCCCACAAAAGCTCTGAAGATTGGAAGCCCAATGGGTTATGCCAAAAAATTTGTCGGGAAGCAAAAATTAAAAGGACTGAATCTCTTTAAAAAAAAGAAAGTTTATAGAGTGAAGAATCGGGAAACAGAAGGAGAAGCTTCTAAGGCTGAAAGGCAGAATTTGAAGGGAAGGAAAGAACTTAATGAGATAAACTTGGTCATGGATCTTGGCCATATATCTCCTCTATCTGATACAAATTTTTCTAGTCCTGAGGGATCATCATACACACCATCACCATTATCACCAATTGAGTCCGAAATGATGAAGGATAGCTTGGGAAATATGGTCATGAGTGACCAAAAAGAATGGGAAAAACAGAGCTTGAAGAAACAAGGCGAAGAGAATGATGAAGAAGCAAATTTCAAGAGGAAACTGACTAAGTGGTTGAAAAATACTAATATTAGATTGTCTTCTGAATTTAATTCTACCTGTGATGATGTTGTAGGCCCTTTACAAATTGTTCCCCCGAATTTAAACTTTGAAAAAATGAATGACGATGTAATAGATGGTGAGGAGCAAGACACCATGGGGCAGACTGTTTTGCCATGA

mRNA sequence

ATGTCTGCCTTTGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGTGGCTCCAGAAACAGTCGACAAAGTAGAGCTGACTGAAGTTTTGATTAAGGTGAAGGTTAACTACACGGGGTTTTTACCAGCATTTATTAAAATCTATGATGAAGAAGGAAGCGATTTCACTATCCATACAGTAACACATCTAGAAGAAAGATGGTTGAGAGAAAGGAACCCCAGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAAGTTTCAATGAATACAACCCACAAGCTGAACAATATACCTTTGATAGGAATCTCGCTGTTGTAAGTCAAAAAGACTCGTCGGAAACATCAAAGAGCAGAAACTACAAGATGAACACAAAAATTGGGCCTACAAAAATGAATAAAAAATTGAACAATGCTAAAGTTTATAGAGTGAAGAATCGGGAAACAGAAGGAGAAGCTTCTAAGGCTGAAAGGCAGAATTTGAAGGGAAGGAAAGAACTTAATGAGATAAACTTGGTCATGGATCTTGGCCATATATCTCCTCTATCTGATACAAATTTTTCTAGTCCTGAGGGATCATCATACACACCATCACCATTATCACCAATTGAGTCCGAAATGATGAAGGATAGCTTGGGAAATATGGTCATGAGTGACCAAAAAGAATGGGAAAAACAGAGCTTGAAGAAACAAGGCGAAGAGAATGATGAAGAAGCAAATTTCAAGAGGAAACTGACTAAGTGGTTGAAAAATACTAATATTAGATTGTCTTCTGAATTTAATTCTACCTGTGATGATGTTGTAGGCCCTTTACAAATTGTTCCCCCGAATTTAAACTTTGAAAAAATGAATGACGATGTAATAGATGGTGAGGAGCAAGACACCATGGGGCAGACTGTTTTGCCATGA

Coding sequence (CDS)

ATGTCTGCCTTTGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGTGGCTCCAGAAACAGTCGACAAAGTAGAGCTGACTGAAGTTTTGATTAAGGTGAAGGTTAACTACACGGGGTTTTTACCAGCATTTATTAAAATCTATGATGAAGAAGGAAGCGATTTCACTATCCATACAGTAACACATCTAGAAGAAAGATGGTTGAGAGAAAGGAACCCCAGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAAGTTTCAATGAATACAACCCACAAGCTGAACAATATACCTTTGATAGGAATCTCGCTGTTGTAAGTCAAAAAGACTCGTCGGAAACATCAAAGAGCAGAAACTACAAGATGAACACAAAAATTGGGCCTACAAAAATGAATAAAAAATTGAACAATGCTAAAGTTTATAGAGTGAAGAATCGGGAAACAGAAGGAGAAGCTTCTAAGGCTGAAAGGCAGAATTTGAAGGGAAGGAAAGAACTTAATGAGATAAACTTGGTCATGGATCTTGGCCATATATCTCCTCTATCTGATACAAATTTTTCTAGTCCTGAGGGATCATCATACACACCATCACCATTATCACCAATTGAGTCCGAAATGATGAAGGATAGCTTGGGAAATATGGTCATGAGTGACCAAAAAGAATGGGAAAAACAGAGCTTGAAGAAACAAGGCGAAGAGAATGATGAAGAAGCAAATTTCAAGAGGAAACTGACTAAGTGGTTGAAAAATACTAATATTAGATTGTCTTCTGAATTTAATTCTACCTGTGATGATGTTGTAGGCCCTTTACAAATTGTTCCCCCGAATTTAAACTTTGAAAAAATGAATGACGATGTAATAGATGGTGAGGAGCAAGACACCATGGGGCAGACTGTTTTGCCATGA

Protein sequence

MSAFVQIGEACGGFIEVAPETVDKVELTEVLIKVKVNYTGFLPAFIKIYDEEGSDFTIHTVTHLEERWLRERNPRIHGSFTRNAAESFNEYNPQAEQYTFDRNLAVVSQKDSSETSKSRNYKMNTKIGPTKMNKKLNNAKVYRVKNRETEGEASKAERQNLKGRKELNEINLVMDLGHISPLSDTNFSSPEGSSYTPSPLSPIESEMMKDSLGNMVMSDQKEWEKQSLKKQGEENDEEANFKRKLTKWLKNTNIRLSSEFNSTCDDVVGPLQIVPPNLNFEKMNDDVIDGEEQDTMGQTVLP*

Homology

[Close]

BLAST of MELO3C013298 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.0e-25
Identity = 62/136 (45.59%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 1   MSAFVQIGEACGGFIEVAPETVDKVELTEVLIKVKVNYTGFLPAFIKIYDEEGSDFTIHT 60
           + +FVQIG+ACGGF+EVA ET +  +L E  I+VK NY+GF+PAFIK+ D+E   + I  
Sbjct: 230 LESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQV 289

Query: 61  VTHLEERWLRERNPRIHGSFTRNAAESFNEYNPQAEQYTFDRNLAVVSQKDSSETSKSRN 120
           +   E +W   RNP IHG+FTR AA  F+E+N  +EQY F+ NLA+  +K  S      +
Sbjct: 290 IVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLAISPEKAVSMVIGKED 349

Query: 121 YKMNTKIGPTKMNKKL 137
           +K        + NKKL
Sbjct: 350 WKKKGNGPLLENNKKL 365

[Close]

BLAST of MELO3C013298 vs. TrEMBL
Match: A0A0A0KFP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1


Query: 1   MSAFVQIGEACGGFIEVAPETVDKVELTEVLIKVKVNYTGFLPAFIKIYDEEGSDFTIHT 60
           M  F QIGEACG FIE+  E   +VE+ + ++KVK N+TGF+PAFI ++D++G+ F + +
Sbjct: 84  METFTQIGEACGSFIEITREIKKQVEIRQAMLKVKENFTGFIPAFINVFDKKGNSFLVQS 143

Query: 61  VTHLE 66
           +   E
Sbjct: 144 IVQAE 148

[Close]

BLAST of MELO3C013298 vs. TrEMBL
Match: A0A0A0LH82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.3e-09
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 1


Query: 41  FLPAFIKIYDEEGSDFTIHTVTHLEERWLRERNPRIHGSFTRNAAESFNEYNPQAEQYTF 100
           F+PA+I+I D+ G+ F I  V+H + +WL ERN R HG F   A  SF E+NP A+Q+TF
Sbjct: 8   FVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNAKQFTF 67

Query: 101 DRNLAVVSQKDSSETSKSRNYK----MNTKIGPTKMNK 135
             +  +  +  +S  +K  N +    +N K G     K
Sbjct: 68  IGSEGLPPKHPTSSKNKVLNDEIKNGLNAKFGVLSTQK 105

[Close]

BLAST of MELO3C013298 vs. TrEMBL
Match: A0A0A0KDP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367100 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.2e-06
Identity = 36/123 (29.27%), Postives = 70/123 (56.91%), Query Frame = 1


Query: 131 KMNKKLNNAKVYRVKNRETEGEASKAER--------QNLKGRKELNEINLVMDLGHISPL 190
           + N+     ++Y V++   +   +KA+         Q  + ++E+ ++ LV+DLG +SPL
Sbjct: 11  RQNEMEKRKQIYIVRSPVKQAHLAKAKNERNTKLKIQPKEDKEEMADLKLVVDLGPLSPL 70

Query: 191 SDTNFSSPEGSSYTPSPLSPIESEMMKDSLGNMVMSDQKEWEKQSLKKQGEENDEEANFK 246
           SD   SS +  + + SP SP +  ++K ++  M++SDQ+E      K++ ++ +EE  FK
Sbjct: 71  SDEFLSSSDLFTPSLSPTSPTQPYIVKGNIAPMMISDQEE------KEKSDKEEEETTFK 127

[Close]

BLAST of MELO3C013298 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 97/334 (29.04%), Postives = 160/334 (47.90%), Query Frame = 1


Query: 1   MSAFVQIGEACGGFIEVAPETVDKVELTEVLIKVKVNYTGFLPAFIKIYDEEGSDFTIHT 60
           M  F QIG+ACGG I+VA ET     L E  IK++ NY+GFLPA ++I+D EG+ F+I  
Sbjct: 303 MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPANVRIFDNEGNKFSIQV 362

Query: 61  VTHLEERWLRERNPRIHGSFTRNAAESFNEYNPQAEQYTFDRN-------LAVVSQKDSS 120
           VTH E +WL ERN R+HG+F R AA +F+E+NP++EQ+ F+         LA  S    S
Sbjct: 363 VTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLATSSDGRKS 422

Query: 121 ETSKSRNYKMNTKIGPTKM--------NKKLNNAKVYRVKNR---------ETEGEASKA 180
            T    +   +  I P K+         + +N++ V+   N+           +G   K 
Sbjct: 423 STPDQPSALKSVIIKPDKIATSPSLLNEEAVNDSNVHATANKSGLEILPGISNDGVLDKG 482

Query: 181 ERQ---NLKGRKELNEINLVMDLGHISPLSDTNFSSPEG--SSYTPSPLSPIESEMMKDS 240
           +++    L     LN       +   SP + TN  +P+   ++++PS  SP + +     
Sbjct: 483 KQKVDIQLPPFSALNLDKSKRKVSFYSPCNKTNIFNPDSAPANHSPSLSSPEKKQK---- 542

Query: 241 LGNMVMSDQKEWEKQ--SLKKQGEENDEEANFKRKLTKWLKNTNIRLSSEFNSTCDDVVG 300
                +S ++  +K+  S +   + N ++     +  + + +           T D  +G
Sbjct: 543 -----VSRERSIKKRLPSTQPNSKANQKKGELNIQPIQMMAHEGEASKKGLLLTVD--LG 602

[Close]

BLAST of MELO3C013298 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 123.6 bits (309), Expect = 5.8e-25
Identity = 62/136 (45.59%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 1   MSAFVQIGEACGGFIEVAPETVDKVELTEVLIKVKVNYTGFLPAFIKIYDEEGSDFTIHT 60
           + +FVQIG+ACGGF+EVA ET +  +L E  I+VK NY+GF+PAFIK+ D+E   + I  
Sbjct: 230 LESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQV 289

Query: 61  VTHLEERWLRERNPRIHGSFTRNAAESFNEYNPQAEQYTFDRNLAVVSQKDSSETSKSRN 120
           +   E +W   RNP IHG+FTR AA  F+E+N  +EQY F+ NLA+  +K  S      +
Sbjct: 290 IVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLAISPEKAVSMVIGKED 349

Query: 121 YKMNTKIGPTKMNKKL 137
           +K        + NKKL
Sbjct: 350 WKKKGNGPLLENNKKL 365

[Close]

BLAST of MELO3C013298 vs. NCBI nr
Match: gi|700192460|gb|KGN47664.1| (hypothetical protein Csa_6G367105 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-10
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1


Query: 1   MSAFVQIGEACGGFIEVAPETVDKVELTEVLIKVKVNYTGFLPAFIKIYDEEGSDFTIHT 60
           M  F QIGEACG FIE+  E   +VE+ + ++KVK N+TGF+PAFI ++D++G+ F + +
Sbjct: 84  METFTQIGEACGSFIEITREIKKQVEIRQAMLKVKENFTGFIPAFINVFDKKGNSFLVQS 143

Query: 61  VTHLE 66
           +   E
Sbjct: 144 IVQAE 148

[Close]

BLAST of MELO3C013298 vs. NCBI nr
Match: gi|700205999|gb|KGN61118.1| (hypothetical protein Csa_2G055060 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 7.6e-09
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 1


Query: 41  FLPAFIKIYDEEGSDFTIHTVTHLEERWLRERNPRIHGSFTRNAAESFNEYNPQAEQYTF 100
           F+PA+I+I D+ G+ F I  V+H + +WL ERN R HG F   A  SF E+NP A+Q+TF
Sbjct: 8   FVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNAKQFTF 67

Query: 101 DRNLAVVSQKDSSETSKSRNYK----MNTKIGPTKMNK 135
             +  +  +  +S  +K  N +    +N K G     K
Sbjct: 68  IGSEGLPPKHPTSSKNKVLNDEIKNGLNAKFGVLSTQK 105

[Close]

BLAST of MELO3C013298 vs. NCBI nr
Match: gi|700192459|gb|KGN47663.1| (hypothetical protein Csa_6G367100 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 6.0e-06
Identity = 36/123 (29.27%), Postives = 70/123 (56.91%), Query Frame = 1


Query: 131 KMNKKLNNAKVYRVKNRETEGEASKAER--------QNLKGRKELNEINLVMDLGHISPL 190
           + N+     ++Y V++   +   +KA+         Q  + ++E+ ++ LV+DLG +SPL
Sbjct: 11  RQNEMEKRKQIYIVRSPVKQAHLAKAKNERNTKLKIQPKEDKEEMADLKLVVDLGPLSPL 70

Query: 191 SDTNFSSPEGSSYTPSPLSPIESEMMKDSLGNMVMSDQKEWEKQSLKKQGEENDEEANFK 246
           SD   SS +  + + SP SP +  ++K ++  M++SDQ+E      K++ ++ +EE  FK
Sbjct: 71  SDEFLSSSDLFTPSLSPTSPTQPYIVKGNIAPMMISDQEE------KEKSDKEEEETTFK 127

The following BLAST results are available for this feature:

BLAST of MELO3C013298 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GB30_CUCME	4.0e-25	45.59	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KFP0_CUCSA	2.1e-10	46.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1	[more]
A0A0A0LH82_CUCSA	5.3e-09	37.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1	[more]
A0A0A0KDP8_CUCSA	4.2e-06	29.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367100 PE=4 SV=1	[more]

BLAST of MELO3C013298 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071590\|ref\|XP_008460776.1\|	1.2e-25	29.04	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me...	[more]
gi\|307135793\|gb\|ADN33672.1\|	5.8e-25	45.59	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|700192460\|gb\|KGN47664.1\|	3.1e-10	46.15	hypothetical protein Csa_6G367105 [Cucumis sativus]	[more]
gi\|700205999\|gb\|KGN61118.1\|	7.6e-09	37.76	hypothetical protein Csa_2G055060 [Cucumis sativus]	[more]
gi\|700192459\|gb\|KGN47663.1\|	6.0e-06	29.27	hypothetical protein Csa_6G367100 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013298T1	MELO3C013298T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 139..159 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013298	Silver-seed gourd	carmeB0354
MELO3C013298	Silver-seed gourd	carmeB1016
MELO3C013298	Cucumber (Chinese Long) v3	cucmeB549
MELO3C013298	Watermelon (97103) v2	mewmbB179
MELO3C013298	Wax gourd	mewgoB213
MELO3C013298	Cucumber (Gy14) v1	cgymeB120
MELO3C013298	Cucurbita maxima (Rimu)	cmameB092
MELO3C013298	Cucurbita maxima (Rimu)	cmameB462
MELO3C013298	Cucurbita maxima (Rimu)	cmameB511
MELO3C013298	Cucurbita maxima (Rimu)	cmameB565
MELO3C013298	Cucurbita moschata (Rifu)	cmomeB091
MELO3C013298	Cucurbita moschata (Rifu)	cmomeB453
MELO3C013298	Cucurbita moschata (Rifu)	cmomeB554
MELO3C013298	Wild cucumber (PI 183967)	cpimeB539
MELO3C013298	Cucumber (Chinese Long) v2	cumeB531
MELO3C013298	Watermelon (Charleston Gray)	mewcgB196
MELO3C013298	Watermelon (97103) v1	mewmB239
MELO3C013298	Cucurbita pepo (Zucchini)	cpemeB224
MELO3C013298	Cucurbita pepo (Zucchini)	cpemeB274
MELO3C013298	Cucurbita pepo (Zucchini)	cpemeB610
MELO3C013298	Bottle gourd (USVL1VR-Ls)	lsimeB096
MELO3C013298	Cucumber (Gy14) v2	cgybmeB469