MELO3C013241.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013241.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Carotenoid cleavage dioxygenase
Location	chr01 : 15484222 .. 15485364 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCCAGATTGGTGATCTGAAAGGGTTATTTGGTTTAATAATGGTTAACATGCAAATGCTGAGAGCAAAGTTAAAAGTGTTAGATGTTTCGTATGAAACTGGGACAGGTAGGGTTTTATTTACTTTTTGTTTTTTTTAATTTGTTGGAGTCCTCGTCATTTTTTTTTGGTAAAATTTTCTTCAGATTCATAAATGCCCTATTAAACTATTCCAAACATTGTCATCCTTCAATATTGCATTCTCTGTTTTCAACTTTGTTTGGGATCGATGATGATAGTTAGACTCGAAATCCTTGATCATTTTGGTGACTCTACATGGTATGGTTTTGGTATGCCACCCATGTTAAATTGTATACATGATCGTTATCATTTTTGGCATTGTCAAATTCTCCATGTGATTGAGATACACTGGGGTCGGGCATCCTGAAAAGCTCAGGTTTAGTCCTGCTTATTTTCATTTTCCACTGATGATAGTGTAGCTCTCTCTATTAGATATTATGATCAAATATGCATGTACTCTTTTTACTTCTTTCCTTTTTATGGAACTTAAATTTTAAATTGTTTGAAGTTAATAATCAATAACTTATCTAGGTAACACGACTCTCATATATCACCATGGAAAGCTGCTAACACTTTCGAAGGGAGATAAACCTTGTAAGTTTTATCTTCTCTCTTTCAAGTTCCGATATTTTCTCCTCAAACATCAGTCTCAAGATCTTGATGGGAAAGGAAAAATCAATTGTCCTCCCCCAATCACCCTATGGCTACTGAATAACAAAATTAGAAGCACAAACACCATTGAGTAGTTGGTTTTGCTTTATGTAGATGTTATAAAAGTGTTGGAGGGTGGAGATCTGCAGATGCTTGGTCTGCTGGATTATGACAAGAAATTGACACACACCTTCACTGCTCATCCAAAGGTTAATCCAGTCACTGGTATAAGCACCATAAAAGACACCAATTAAGTTTGGTGAAATATGATGAAGTGCTCAATGCTGATTAATTTTCTGCATGCAGGTGAAATGTTTACATTTGGTTATTCTCATTCACCGCCATATGTTACCTACAGAGTTATTTCCAAGGACGGTCTCATGCATGATCCCGTACCAATCACAATTCCAGCTCCGGTCATGATGTGA

mRNA sequence

ATGTCATTCCAGATTGGTGATCTGAAAGGGTTATTTGGTTTAATAATGGTTAACATGCAAATGCTGAGAGCAAAGTTAAAAGTGTTAGATGTTTCGTATGAAACTGGGACAGGTAACACGACTCTCATATATCACCATGGAAAGCTGCTAACACTTTCGAAGGGAGATAAACCTTATGTTATAAAAGTGTTGGAGGGTGGAGATCTGCAGATGCTTGGTCTGCTGGATTATGACAAGAAATTGACACACACCTTCACTGCTCATCCAAAGGTTAATCCAGTCACTGGTGAAATGTTTACATTTGGTTATTCTCATTCACCGCCATATGTTACCTACAGAGTTATTTCCAAGGACGGTCTCATGCATGATCCCGTACCAATCACAATTCCAGCTCCGGTCATGATGTGA

Coding sequence (CDS)

ATGTCATTCCAGATTGGTGATCTGAAAGGGTTATTTGGTTTAATAATGGTTAACATGCAAATGCTGAGAGCAAAGTTAAAAGTGTTAGATGTTTCGTATGAAACTGGGACAGGTAACACGACTCTCATATATCACCATGGAAAGCTGCTAACACTTTCGAAGGGAGATAAACCTTATGTTATAAAAGTGTTGGAGGGTGGAGATCTGCAGATGCTTGGTCTGCTGGATTATGACAAGAAATTGACACACACCTTCACTGCTCATCCAAAGGTTAATCCAGTCACTGGTGAAATGTTTACATTTGGTTATTCTCATTCACCGCCATATGTTACCTACAGAGTTATTTCCAAGGACGGTCTCATGCATGATCCCGTACCAATCACAATTCCAGCTCCGGTCATGATGTGA

Protein sequence

MSFQIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKVLEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHDPVPITIPAPVMM

Homology

[Close]

BLAST of MELO3C013241.2 vs. NCBI nr
Match: ABB82946.1 (carotenoid cleavage dioxygenase, partial [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 5.5e-64
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQMLRAKLKVLDVSY TGTGNT LIYHHGKLL LS+GDKPYVIKV
Sbjct: 140 KIGDLKGFFGLIMVNMQMLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEGDKPYVIKV 199

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+LTHTFTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 200 LEDGDLQTLGLLDYDKRLTHTFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 259

Query: 124 PVPITIPAPVMM 136
           PVPITIPAPVMM
Sbjct: 260 PVPITIPAPVMM 271

[Close]

BLAST of MELO3C013241.2 vs. NCBI nr
Match: XP_008461300.1 (PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 5.5e-64
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQMLRAKLKVLDVSY TGTGNT LIYHHGKLL LS+GDKPYVIKV
Sbjct: 144 KIGDLKGFFGLIMVNMQMLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEGDKPYVIKV 203

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+LTHTFTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 204 LEDGDLQTLGLLDYDKRLTHTFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 263

Query: 124 PVPITIPAPVMM 136
           PVPITIPAPVMM
Sbjct: 264 PVPITIPAPVMM 275

[Close]

BLAST of MELO3C013241.2 vs. NCBI nr
Match: XP_004135934.1 (PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X1 [Cucumis sativus] >KGN45124.1 hypothetical protein Csa_7G428120 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 6.0e-63
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQ+LRAKLKVLDVSY TGTGNT LIYHHGKLL LS+GDKPYVIKV
Sbjct: 144 KIGDLKGFFGLIMVNMQLLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEGDKPYVIKV 203

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+L HTFTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 204 LEDGDLQTLGLLDYDKRLKHTFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 263

Query: 124 PVPITIPAPVMM 136
           PVPITIPAPVMM
Sbjct: 264 PVPITIPAPVMM 275

[Close]

BLAST of MELO3C013241.2 vs. NCBI nr
Match: XP_011659448.1 (PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 6.0e-63
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQ+LRAKLKVLDVSY TGTGNT LIYHHGKLL LS+GDKPYVIKV
Sbjct: 37  KIGDLKGFFGLIMVNMQLLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEGDKPYVIKV 96

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+L HTFTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 97  LEDGDLQTLGLLDYDKRLKHTFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 156

Query: 124 PVPITIPAPVMM 136
           PVPITIPAPVMM
Sbjct: 157 PVPITIPAPVMM 168

[Close]

BLAST of MELO3C013241.2 vs. NCBI nr
Match: AFU91489.1 (carotenoid cleavage dioxygenase 1 [Momordica charantia])

HSP 1 Score: 246.5 bits (628), Expect = 5.1e-62
Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQMLRAKLKVLDVSY TGTGNT LIYHHGKLL LS+ DKPYVIKV
Sbjct: 144 KIGDLKGFFGLIMVNMQMLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEADKPYVIKV 203

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+LTH+FTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 204 LEDGDLQTLGLLDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 263

Query: 124 PVPITIPAPVMM 136
           P+PITIP PVMM
Sbjct: 264 PIPITIPNPVMM 275

[Close]

BLAST of MELO3C013241.2 vs. TAIR10
Match: AT3G63520.1 (carotenoid cleavage dioxygenase 1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-58
Identity = 101/132 (76.52%), Postives = 117/132 (88.64%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGL+MVN+Q LR KLK+LD +Y  GT NT L+YHHGKLL L + DKPYVIKV
Sbjct: 138 KIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYHHGKLLALQEADKPYVIKV 197

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LG++DYDK+LTH+FTAHPKV+PVTGEMFTFGYSH+PPY+TYRVISKDG+MHD
Sbjct: 198 LEDGDLQTLGIIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPYLTYRVISKDGIMHD 257

Query: 124 PVPITIPAPVMM 136
           PVPITI  P+MM
Sbjct: 258 PVPITISEPIMM 269

[Close]

BLAST of MELO3C013241.2 vs. TAIR10
Match: AT3G14440.1 (nine-cis-epoxycarotenoid dioxygenase 3)

HSP 1 Score: 97.4 bits (241), Expect = 7.0e-21
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 5   IGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKVL 64
           IG+L G  G+  + +   RA   ++D ++ TG  N  L+Y +G+LL +S+ D PY +++ 
Sbjct: 214 IGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQIT 273

Query: 65  EGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYS-HSPPYVTYRVISKDGLMHD 124
             GDL+ +G  D+D +L  T  AHPKV+P +GE+F   Y   S PY+ Y   S DG    
Sbjct: 274 PNGDLKTVGRFDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSP 333

Query: 125 PVPITIPAPVMM 136
            V I +  P MM
Sbjct: 334 DVEIQLDQPTMM 345

[Close]

BLAST of MELO3C013241.2 vs. TAIR10
Match: AT1G30100.1 (nine-cis-epoxycarotenoid dioxygenase 5)

HSP 1 Score: 91.3 bits (225), Expect = 5.0e-19
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 5   IGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKVL 64
           IG+L G  G+  + +   R    +L+    TG  N  L+Y H +LL +S+ D PY ++V 
Sbjct: 204 IGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVT 263

Query: 65  EGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYS-HSPPYVTYRVISKDGLMHD 124
           + GDL+ +G  D+D +L+    AHPK++PVT E+F   Y     PY+ Y   S +G    
Sbjct: 264 DNGDLETIGRFDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSP 323

Query: 125 PVPITIPAPVMM 136
            V I + +P MM
Sbjct: 324 DVEIPLASPTMM 335

[Close]

BLAST of MELO3C013241.2 vs. TAIR10
Match: AT1G78390.1 (nine-cis-epoxycarotenoid dioxygenase 9)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-17
Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 5   IGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKVL 64
           IG+L G  G+  + +   R    ++D +   G  N  L+Y +G LL +S+ D PY +KV 
Sbjct: 274 IGELHGHLGIAKLMLFNTRGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPYHVKVT 333

Query: 65  EGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYS-HSPPYVTYRVISKDGLMHD 124
           + GDL+  G  D+D +L  T  AHPK++P T E+F   Y   S PY+ Y   + DG    
Sbjct: 334 QTGDLETSGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSP 393

Query: 125 PVPITIPAPVMM 136
            V I +  P M+
Sbjct: 394 DVEIPLDQPTMI 405

[Close]

BLAST of MELO3C013241.2 vs. TAIR10
Match: AT4G19170.1 (nine-cis-epoxycarotenoid dioxygenase 4)

HSP 1 Score: 85.1 bits (209), Expect = 3.6e-17
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 36  GTGNTTLIYHHGKLLTLSKGDKPYVIKVLEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVT 95
           G  NT+L +   +L  L + D PY +++ E GD++ +G  D+D KL  + TAHPK +P+T
Sbjct: 235 GLANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPIT 294

Query: 96  GEMFTFGYSHSPPYVTYRVISKDGLMHDPVPI 128
           GE F F Y   PP++TY      G     VPI
Sbjct: 295 GETFAFRYGPVPPFLTYFRFDSAGKKQRDVPI 326

[Close]

BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|Q84KG5|CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus OX=82528 GN=CCD PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-58
Identity = 106/132 (80.30%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGL MV MQ+LRAKLKV+DVSY  GTGNT LIYHHGKLL LS+ DKPYV+KV
Sbjct: 142 KIGDLKGFFGLFMVQMQLLRAKLKVIDVSYGVGTGNTALIYHHGKLLALSEADKPYVVKV 201

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+L+H+FTAHPKV+P T EMFTFGY+H+PPYVTYRVISKDG+M D
Sbjct: 202 LEDGDLQTLGLLDYDKRLSHSFTAHPKVDPFTDEMFTFGYAHTPPYVTYRVISKDGVMRD 261

Query: 124 PVPITIPAPVMM 136
           PVPITIPA VMM
Sbjct: 262 PVPITIPASVMM 273

[Close]

BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|O65572|CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=CCD1 PE=1 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 2.0e-57
Identity = 101/132 (76.52%), Postives = 117/132 (88.64%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGL+MVN+Q LR KLK+LD +Y  GT NT L+YHHGKLL L + DKPYVIKV
Sbjct: 138 KIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYHHGKLLALQEADKPYVIKV 197

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LG++DYDK+LTH+FTAHPKV+PVTGEMFTFGYSH+PPY+TYRVISKDG+MHD
Sbjct: 198 LEDGDLQTLGIIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPYLTYRVISKDGIMHD 257

Query: 124 PVPITIPAPVMM 136
           PVPITI  P+MM
Sbjct: 258 PVPITISEPIMM 269

[Close]

BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|Q8LP17|CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum OX=3888 GN=CCD1 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-56
Identity = 105/132 (79.55%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKGLFGL+MVNMQMLRAKLK+LDVSY  GT NT L+YHH KLL LS+GDKPY IKV
Sbjct: 138 KIGDLKGLFGLLMVNMQMLRAKLKILDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKV 197

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
            E GDLQ LG+LDYDK+L H FTAHPKV+P TGEMFTFGYSH+ PYVTYRVISKDG M D
Sbjct: 198 FEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHTAPYVTYRVISKDGFMQD 257

Query: 124 PVPITIPAPVMM 136
           PVPITI  PVMM
Sbjct: 258 PVPITISDPVMM 269

[Close]

BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|Q94IR2|CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris OX=3885 GN=CCD1 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-55
Identity = 100/132 (75.76%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKGLFGL+MVN+ MLR KLKVLD+SY  GT NT L+YHHGKLL LS+ DKPY IKV
Sbjct: 140 KIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYHHGKLLALSEADKPYAIKV 199

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
            E GDLQ LG+LDYDK+L H+FTAHPKV+P TGEMF+FGY+H+PPY+TYRVISKDG MHD
Sbjct: 200 FEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGEMFSFGYAHTPPYITYRVISKDGYMHD 259

Query: 124 PVPITIPAPVMM 136
           PVPITI  P+MM
Sbjct: 260 PVPITISDPIMM 271

[Close]

BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|C3VEQ4|CCD1_ONCHC (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar OX=141207 GN=CCD1 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.4e-55
Identity = 100/132 (75.76%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKGLFGL MV M++LRAKLK+LDVSY   T NT +IYHHGKLL LS+GDKPYVIKV
Sbjct: 159 KIGDLKGLFGLFMVQMELLRAKLKILDVSYGRSTANTAMIYHHGKLLALSEGDKPYVIKV 218

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDY+K+L H+FTAHPKV+P T EMFTFGYSH+ PY+TYRVI+KDG+M +
Sbjct: 219 LEDGDLQTLGLLDYNKRLAHSFTAHPKVDPFTDEMFTFGYSHTSPYITYRVITKDGVMLN 278

Query: 124 PVPITIPAPVMM 136
           PVPITIP P+MM
Sbjct: 279 PVPITIPEPIMM 290

[Close]

BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|A0A1S3CFM3|A0A1S3CFM3_CUCME (carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Cucumis melo OX=3656 GN=LOC103499930 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQMLRAKLKVLDVSY TGTGNT LIYHHGKLL LS+GDKPYVIKV
Sbjct: 144 KIGDLKGFFGLIMVNMQMLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEGDKPYVIKV 203

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+LTHTFTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 204 LEDGDLQTLGLLDYDKRLTHTFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 263

Query: 124 PVPITIPAPVMM 136
           PVPITIPAPVMM
Sbjct: 264 PVPITIPAPVMM 275

[Close]

BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|Q0H394|Q0H394_CUCME (Carotenoid cleavage dioxygenase (Fragment) OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQMLRAKLKVLDVSY TGTGNT LIYHHGKLL LS+GDKPYVIKV
Sbjct: 140 KIGDLKGFFGLIMVNMQMLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEGDKPYVIKV 199

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+LTHTFTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 200 LEDGDLQTLGLLDYDKRLTHTFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 259

Query: 124 PVPITIPAPVMM 136
           PVPITIPAPVMM
Sbjct: 260 PVPITIPAPVMM 271

[Close]

BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|A0A0A0K8B3|A0A0A0K8B3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428120 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.0e-63
Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQ+LRAKLKVLDVSY TGTGNT LIYHHGKLL LS+GDKPYVIKV
Sbjct: 144 KIGDLKGFFGLIMVNMQLLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEGDKPYVIKV 203

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+L HTFTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 204 LEDGDLQTLGLLDYDKRLKHTFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 263

Query: 124 PVPITIPAPVMM 136
           PVPITIPAPVMM
Sbjct: 264 PVPITIPAPVMM 275

[Close]

BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|K4K0F3|K4K0F3_MOMCH (Carotenoid cleavage dioxygenase 1 OS=Momordica charantia OX=3673 GN=CCD1 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.4e-62
Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGLIMVNMQMLRAKLKVLDVSY TGTGNT LIYHHGKLL LS+ DKPYVIKV
Sbjct: 144 KIGDLKGFFGLIMVNMQMLRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEADKPYVIKV 203

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+LTH+FTAHPKV+PVTGEMFTFGYSHSPPYVTYRVISKDGLMHD
Sbjct: 204 LEDGDLQTLGLLDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 263

Query: 124 PVPITIPAPVMM 136
           P+PITIP PVMM
Sbjct: 264 PIPITIPNPVMM 275

[Close]

BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|G3LUM8|G3LUM8_CUCMO (Carotenoid cleavage dioxygenase (Fragment) OS=Cucurbita moschata OX=3662 GN=CCD PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.2e-61
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 4   QIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKV 63
           +IGDLKG FGL+MVNMQ+LRAKLKVLDVSY TGTGNT LIYHHGKLL LS+ DKPYVIKV
Sbjct: 39  KIGDLKGFFGLVMVNMQILRAKLKVLDVSYGTGTGNTALIYHHGKLLALSEADKPYVIKV 98

Query: 64  LEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHD 123
           LE GDLQ LGLLDYDK+LTH+FTAHPKV+PVTGEMFTFGYSH+PPYVTYRVISKDGLMHD
Sbjct: 99  LEDGDLQTLGLLDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPYVTYRVISKDGLMHD 158

Query: 124 PVPITIPAPVMM 136
           PVPITIP PVMM
Sbjct: 159 PVPITIPNPVMM 170

The following BLAST results are available for this feature:

BLAST of MELO3C013241.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ABB82946.1	5.5e-64	92.42	carotenoid cleavage dioxygenase, partial [Cucumis melo]	[more]
XP_008461300.1	5.5e-64	92.42	PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Cucumis melo]	[more]
XP_004135934.1	6.0e-63	90.91	PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X1 [Cucumis sa...	[more]
XP_011659448.1	6.0e-63	90.91	PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis sa...	[more]
AFU91489.1	5.1e-62	89.39	carotenoid cleavage dioxygenase 1 [Momordica charantia]	[more]

BLAST of MELO3C013241.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63520.1	1.1e-58	76.52	carotenoid cleavage dioxygenase 1	[more]
AT3G14440.1	7.0e-21	37.88	nine-cis-epoxycarotenoid dioxygenase 3	[more]
AT1G30100.1	5.0e-19	35.61	nine-cis-epoxycarotenoid dioxygenase 5	[more]
AT1G78390.1	2.1e-17	35.61	nine-cis-epoxycarotenoid dioxygenase 9	[more]
AT4G19170.1	3.6e-17	40.22	nine-cis-epoxycarotenoid dioxygenase 4	[more]

BLAST of MELO3C013241.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84KG5\|CCD_CROSA	4.0e-58	80.30	Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus OX=82528 GN=CCD P...	[more]
sp\|O65572\|CCD1_ARATH	2.0e-57	76.52	Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q8LP17\|CCD1_PEA	1.3e-56	79.55	Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum OX=3888 GN=CCD1 ...	[more]
sp\|Q94IR2\|CCD1_PHAVU	1.1e-55	75.76	Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris OX=3885 GN=...	[more]
sp\|C3VEQ4\|CCD1_ONCHC	5.4e-55	75.76	Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar OX=14...	[more]

BLAST of MELO3C013241.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CFM3\|A0A1S3CFM3_CUCME	3.6e-64	92.42	carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|Q0H394\|Q0H394_CUCME	3.6e-64	92.42	Carotenoid cleavage dioxygenase (Fragment) OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
tr\|A0A0A0K8B3\|A0A0A0K8B3_CUCSA	4.0e-63	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428120 PE=3 SV=1	[more]
tr\|K4K0F3\|K4K0F3_MOMCH	3.4e-62	89.39	Carotenoid cleavage dioxygenase 1 OS=Momordica charantia OX=3673 GN=CCD1 PE=2 SV...	[more]
tr\|G3LUM8\|G3LUM8_CUCMO	2.2e-61	87.88	Carotenoid cleavage dioxygenase (Fragment) OS=Cucurbita moschata OX=3662 GN=CCD ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR004294	Carotenoid_Oase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013241.2.1	MELO3C013241.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004294	Carotenoid oxygenase	PFAM	PF03055	RPE65	coord: 36..135 e-value: 3.9E-17 score: 62.5
IPR004294	Carotenoid oxygenase	PANTHER	PTHR10543	BETA-CAROTENE DIOXYGENASE	coord: 4..135
None	No IPR available	PANTHER	PTHR10543:SF37	CAROTENOID 9,10 9',10' -CLEAVAGE DIOXYGENASE 1	coord: 4..135

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013241.2	Cucurbita maxima (Rimu)	cmamedB015
MELO3C013241.2	Cucurbita moschata (Rifu)	cmomedB003
MELO3C013241.2	Cucurbita pepo (Zucchini)	cpemedB591
MELO3C013241.2	Cucurbita pepo (Zucchini)	cpemedB844
MELO3C013241.2	Silver-seed gourd	carmedB1012