MELO3C013240 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013240
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRNA-binding protein 4.1
Locationchr1 : 14644204 .. 14644407 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCGTGGGTTGACGGCGTTCTTCGAGTTCTTCGAAGGAGGGGTCATGGTTCTTCGAGTTCTTTGGCGTTATTCAGCAGAGGAGTCGTGGGTCGACAACGTTCTTCAACGAAGGGGTTCTTTGCCGGAGGGGTTTTCGTCGGAGGGGTTTTCACCAGTTCGTCACAGTGTGGGGGCGTGGGTCTTTGTGAGAGAGATGGGA

mRNA sequence

ATGGGTCGTGGGTTGACGGCGTTCTTCGAGTTCTTCGAAGGAGGGGTCATGGTTCTTCGAGTTCTTTGGCGTTATTCAGCAGAGGAGTCGTGGGTCGACAACGTTCTTCAACGAAGGGGTTCTTTGCCGGAGGGGTTTTCGTCGGAGGGGTTTTCACCAGTTCGTCACAGTGTGGGGGCGTGGGTCTTTGTGAGAGAGATGGGA

Coding sequence (CDS)

ATGGGTCGTGGGTTGACGGCGTTCTTCGAGTTCTTCGAAGGAGGGGTCATGGTTCTTCGAGTTCTTTGGCGTTATTCAGCAGAGGAGTCGTGGGTCGACAACGTTCTTCAACGAAGGGGTTCTTTGCCGGAGGGGTTTTCGTCGGAGGGGTTTTCACCAGTTCGTCACAGTGTGGGGGCGTGGGTCTTTGTGAGAGAGATGGGA

Protein sequence

MGRGLTAFFEFFEGGVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRHSVGAWVFVREMG
Homology
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BLAST of MELO3C013240 vs. NCBI nr
Match: gi|659094515|ref|XP_008448103.1| (PREDICTED: wall-associated receptor kinase 2-like [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-24
Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MGRGLTAFFEFFEGGVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRHSV 59
          MGRGLTAFFEFFEGGVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRH++
Sbjct: 1  MGRGLTAFFEFFEGGVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRHNL 58

The following BLAST results are available for this feature:
BLAST of MELO3C013240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094515|ref|XP_008448103.1|1.9e-2496.55PREDICTED: wall-associated receptor kinase 2-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013240T1MELO3C013240T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013240Cucurbita maxima (Rimu)cmameB015
MELO3C013240Cucurbita moschata (Rifu)cmomeB004
MELO3C013240Cucurbita pepo (Zucchini)cpemeB499
MELO3C013240Cucurbita pepo (Zucchini)cpemeB711
MELO3C013240Bottle gourd (USVL1VR-Ls)lsimeB094
MELO3C013240Silver-seed gourdcarmeB1000