MELO3C013142 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013142
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProbable cysteine desulfurase 2
Locationchr1 : 12381593 .. 12381928 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAGAAGCGAATTGAGGAGAAACTCGAAGCAGTTGATCAAGACACTTCGAGCATAAGAGTGGAATTACACAAGTTGTCAACGATAGAGGAGAATTTGGCATCCATGGCTAAGAGCATTGAACGATTGGGTATTCAGGCTGAGAAACAACATCAACAGCAGTTGCTACTGAAATGCATAGAAGGAATAATGAAGGAGAAGTCAACGATGATTGAAGGGCCTGAGGGATCATCAAGTAAAGGATCACGGATTGCCAGTATGATGGATGGGGGAAATCCTTCTATCCAAGAGATCAAGACTGCAACGAAGACATGCCAAATGCAGCTAGGGTAA

mRNA sequence

ATGGCACAGAAGCGAATTGAGGAGAAACTCGAAGCAGTTGATCAAGACACTTCGAGCATAAGAGTGGAATTACACAAGTTGTCAACGATAGAGGAGAATTTGGCATCCATGGCTAAGAGCATTGAACGATTGGGTATTCAGGCTGAGAAACAACATCAACAGCAGTTGCTACTGAAATGCATAGAAGGAATAATGAAGGAGAAGTCAACGATGATTGAAGGGCCTGAGGGATCATCAAGTAAAGGATCACGGATTGCCAGTATGATGGATGGGGGAAATCCTTCTATCCAAGAGATCAAGACTGCAACGAAGACATGCCAAATGCAGCTAGGGTAA

Coding sequence (CDS)

ATGGCACAGAAGCGAATTGAGGAGAAACTCGAAGCAGTTGATCAAGACACTTCGAGCATAAGAGTGGAATTACACAAGTTGTCAACGATAGAGGAGAATTTGGCATCCATGGCTAAGAGCATTGAACGATTGGGTATTCAGGCTGAGAAACAACATCAACAGCAGTTGCTACTGAAATGCATAGAAGGAATAATGAAGGAGAAGTCAACGATGATTGAAGGGCCTGAGGGATCATCAAGTAAAGGATCACGGATTGCCAGTATGATGGATGGGGGAAATCCTTCTATCCAAGAGATCAAGACTGCAACGAAGACATGCCAAATGCAGCTAGGGTAA

Protein sequence

MAQKRIEEKLEAVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEKQHQQQLLLKCIEGIMKEKSTMIEGPEGSSSKGSRIASMMDGGNPSIQEIKTATKTCQMQLG*
Homology
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BLAST of MELO3C013142 vs. NCBI nr
Match: gi|659109397|ref|XP_008454696.1| (PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-07
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 1 

Query: 1  MAQKRIEEKLEAVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEKQHQQQLLLKC 60
          M Q RIEE+LE +DQ+ + ++ EL K+  IE +L+ +AKS+E + +Q+EK  QQQLL   
Sbjct: 1  MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEK--QQQLLFTI 60

Query: 61 IEGIMKEKSTM 72
          IE   KE+STM
Sbjct: 61 IETNSKERSTM 69

The following BLAST results are available for this feature:
BLAST of MELO3C013142 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109397|ref|XP_008454696.1|1.2e-0749.30PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013142T1MELO3C013142T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013142Cucumber (Chinese Long) v3cucmeB552
MELO3C013142Watermelon (97103) v2mewmbB228
MELO3C013142Wax gourdmewgoB255
MELO3C013142Cucurbita maxima (Rimu)cmameB018
MELO3C013142Cucurbita maxima (Rimu)cmameB395
MELO3C013142Cucurbita moschata (Rifu)cmomeB007
MELO3C013142Cucurbita moschata (Rifu)cmomeB386
MELO3C013142Wild cucumber (PI 183967)cpimeB542
MELO3C013142Cucumber (Chinese Long) v2cumeB534
MELO3C013142Watermelon (Charleston Gray)mewcgB180
MELO3C013142Watermelon (97103) v1mewmB201
MELO3C013142Cucurbita pepo (Zucchini)cpemeB503
MELO3C013142Cucurbita pepo (Zucchini)cpemeB713
MELO3C013142Bottle gourd (USVL1VR-Ls)lsimeB188
MELO3C013142Cucumber (Gy14) v2cgybmeB472
MELO3C013142Silver-seed gourdcarmeB0872
MELO3C013142Silver-seed gourdcarmeB0890