MELO3C013105 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013105
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUDP-N-acetylenolpyruvoylglucosamine reductase
Locationchr1 : 11612287 .. 11612490 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGTTATCTCCTTCATAATTTAATAAATCGGGAGATGACTTACATCGAAGAATTGGATGATGAAGACGATGGTGACTCGACACATGCAACTACTAGTGGGGACGACATCACATACATTGAGCCCTCAAATGAATGGACTGAATGGCGTGATGCGCTTGCTTCGTCGATGTTCACGGAATGGCAGTTGTGTAATCAGTAG

mRNA sequence

ATGGCTTGTTATCTCCTTCATAATTTAATAAATCGGGAGATGACTTACATCGAAGAATTGGATGATGAAGACGATGGTGACTCGACACATGCAACTACTAGTGGGGACGACATCACATACATTGAGCCCTCAAATGAATGGACTGAATGGCGTGATGCGCTTGCTTCGTCGATGTTCACGGAATGGCAGTTGTGTAATCAGTAG

Coding sequence (CDS)

ATGGCTTGTTATCTCCTTCATAATTTAATAAATCGGGAGATGACTTACATCGAAGAATTGGATGATGAAGACGATGGTGACTCGACACATGCAACTACTAGTGGGGACGACATCACATACATTGAGCCCTCAAATGAATGGACTGAATGGCGTGATGCGCTTGCTTCGTCGATGTTCACGGAATGGCAGTTGTGTAATCAGTAG

Protein sequence

MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ*
Homology
[Close]
BLAST of MELO3C013105 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-18
Identity = 43/64 (67.19%), Postives = 56/64 (87.50%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHA-TTSGDDITYIEPSNEWTEWRDALASSMF 60
           +AC LLHNLINREMTY  +++DED+GDST+A TT+ +DI YIE +NEW++WRD LA+SMF
Sbjct: 270 LACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMF 329

Query: 61  TEWQ 64
           T+WQ
Sbjct: 330 TDWQ 333

[Close]
BLAST of MELO3C013105 vs. TrEMBL
Match: A0A0A0M0G4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690220 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-14
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 1 

Query: 1  MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT 60
          MAC LLHNLINRE+T ++ L D D+ D  +ATT G++I Y E SN+W++WRD L  +MF 
Sbjct: 1  MACCLLHNLINREITNVKILKDVDEVDLNYATTEGNNINYNEASNKWSQWRDDLVEAMFN 60

Query: 61 EWQLCN 67
           WQLCN
Sbjct: 61 GWQLCN 66

[Close]
BLAST of MELO3C013105 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-13
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT 60
           +AC LLHNLINREMT  +  D+ D+ DSTHATT+ DDI YIE SNEW++WRD LA  + T
Sbjct: 298 LACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMT 357

[Close]
BLAST of MELO3C013105 vs. TrEMBL
Match: A0A061FVT5_THECC (Retrotransposon protein, putative OS=Theobroma cacao GN=TCM_043444 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-06
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDD---ITYIEPSNEWTEWRDALASS 60
           +AC LLHN I REMT+  +L +++ G+  H  T+ ++   I  I P++ WT WR  LA+ 
Sbjct: 242 IACCLLHNFIRREMTF--DLIEDEVGEYLHDNTTPEEEDVIGAINPTDAWTNWRMQLANE 301

Query: 61  MFTEWQLCNQ 68
           +FTEWQ   Q
Sbjct: 302 IFTEWQTSRQ 309

[Close]
BLAST of MELO3C013105 vs. NCBI nr
Match: gi|659086609|ref|XP_008444024.1| (PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 2.5e-29
Identity = 63/67 (94.03%), Postives = 64/67 (95.52%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT 60
           MAC LLHNLINRE+TYI ELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT
Sbjct: 228 MACCLLHNLINREITYINELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT 287

Query: 61  EWQLCNQ 68
           EWQL NQ
Sbjct: 288 EWQLRNQ 294

[Close]
BLAST of MELO3C013105 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 98.6 bits (244), Expect = 4.5e-18
Identity = 43/64 (67.19%), Postives = 56/64 (87.50%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHA-TTSGDDITYIEPSNEWTEWRDALASSMF 60
           +AC LLHNLINREMTY  +++DED+GDST+A TT+ +DI YIE +NEW++WRD LA+SMF
Sbjct: 270 LACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMF 329

Query: 61  TEWQ 64
           T+WQ
Sbjct: 330 TDWQ 333

[Close]
BLAST of MELO3C013105 vs. NCBI nr
Match: gi|659112451|ref|XP_008456228.1| (PREDICTED: uncharacterized protein LOC103496233 [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 3.8e-17
Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT 60
           + C LLHNLINREMT  + +DD D+ DSTHAT++ DDI YIE SNEWT WRD LA  MF+
Sbjct: 139 LTCCLLHNLINREMTTFDIVDDIDEVDSTHATSAADDIHYIETSNEWTRWRDDLAKEMFS 198

Query: 61  EWQLCN 67
           EW+L N
Sbjct: 199 EWELRN 204

[Close]
BLAST of MELO3C013105 vs. NCBI nr
Match: gi|659082639|ref|XP_008441953.1| (PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 6.5e-17
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT 60
           MAC LLHNLI REMT  E +DD D+GDST+ATT GD+I YIE SNEW+E RD LA +MF+
Sbjct: 182 MACCLLHNLIKREMTNNEIIDDLDEGDSTYATTGGDEINYIEASNEWSELRDQLAHTMFS 241

Query: 61  EWQLCNQ 68
           +W+L +Q
Sbjct: 242 DWELRDQ 248

[Close]
BLAST of MELO3C013105 vs. NCBI nr
Match: gi|659114872|ref|XP_008457266.1| (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 4.2e-16
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 1 

Query: 1   MACYLLHNLINREMTYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFT 60
           + C LLHNLINREMT  +  D+ D+ DSTHAT + DDI YIE SNEW++WRD LA  MF+
Sbjct: 238 LTCCLLHNLINREMTNFDIQDNIDEVDSTHATIATDDIHYIETSNEWSQWRDDLAEEMFS 297

Query: 61  EWQLCNQ 68
           EW+L NQ
Sbjct: 298 EWELRNQ 304

The following BLAST results are available for this feature:
BLAST of MELO3C013105 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBB2_CUCME3.1e-1867.19Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0M0G4_CUCSA1.2e-1457.58Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690220 PE=4 SV=1[more]
E5GCB5_CUCME2.3e-1363.33Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A061FVT5_THECC1.2e-0642.86Retrotransposon protein, putative OS=Theobroma cacao GN=TCM_043444 PE=4 SV=1[more]
BLAST of MELO3C013105 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086609|ref|XP_008444024.1|2.5e-2994.03PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo][more]
gi|307135889|gb|ADN33754.1|4.5e-1867.19retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659112451|ref|XP_008456228.1|3.8e-1765.15PREDICTED: uncharacterized protein LOC103496233 [Cucumis melo][more]
gi|659082639|ref|XP_008441953.1|6.5e-1765.67PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo][more]
gi|659114872|ref|XP_008457266.1|4.2e-1662.69PREDICTED: putative nuclease HARBI1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013105T1MELO3C013105T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013105Cucurbita pepo (Zucchini)cpemeB503
MELO3C013105Cucurbita pepo (Zucchini)cpemeB713
MELO3C013105Bottle gourd (USVL1VR-Ls)lsimeB188
MELO3C013105Cucumber (Gy14) v2cgybmeB461
MELO3C013105Cucumber (Gy14) v2cgybmeB463
MELO3C013105Silver-seed gourdcarmeB0872
MELO3C013105Silver-seed gourdcarmeB0890
MELO3C013105Cucumber (Chinese Long) v3cucmeB541
MELO3C013105Cucumber (Chinese Long) v3cucmeB544
MELO3C013105Watermelon (97103) v2mewmbB233
MELO3C013105Wax gourdmewgoB255
MELO3C013105Cucurbita maxima (Rimu)cmameB018
MELO3C013105Cucurbita maxima (Rimu)cmameB395
MELO3C013105Cucurbita moschata (Rifu)cmomeB007
MELO3C013105Cucurbita moschata (Rifu)cmomeB386
MELO3C013105Watermelon (Charleston Gray)mewcgB186
MELO3C013105Watermelon (97103) v1mewmB212