MELO3C013038 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013038
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLeucine--tRNA ligase
Locationchr4 : 16382402 .. 16382557 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCGCAACTGGGTTGAAAGACACATAGGGATATTGGTTCAAGGTTGGAGGTCAGACGGTCTAACCGAAAAGGTTAAGCAAACTCTATGGCTTCGGGAGCTGAGAGATTTTCCAGTTGAGATGTCAATGCCTAAAAGTGGTGAGATAGGGTAG

mRNA sequence

ATGGTCCGCAACTGGGTTGAAAGACACATAGGGATATTGGTTCAAGGTTGGAGGTCAGACGGTCTAACCGAAAAGGTTAAGCAAACTCTATGGCTTCGGGAGCTGAGAGATTTTCCAGTTGAGATGTCAATGCCTAAAAGTGGTGAGATAGGGTAG

Coding sequence (CDS)

ATGGTCCGCAACTGGGTTGAAAGACACATAGGGATATTGGTTCAAGGTTGGAGGTCAGACGGTCTAACCGAAAAGGTTAAGCAAACTCTATGGCTTCGGGAGCTGAGAGATTTTCCAGTTGAGATGTCAATGCCTAAAAGTGGTGAGATAGGGTAG

Protein sequence

MVRNWVERHIGILVQGWRSDGLTEKVKQTLWLRELRDFPVEMSMPKSGEIG*
Homology
[Close]
BLAST of MELO3C013038 vs. NCBI nr
Match: gi|659093722|ref|XP_008447683.1| (PREDICTED: uncharacterized protein LOC103490094 [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MVRNWVERHIGILVQGWRSDGLTEKVKQTLWLRELRDFPVEMSMPKSGEIG 52
          MVRNWVERHIGILVQGWRSDGLTEKVKQTLWLRELRDFPVEMSMPKSGEIG
Sbjct: 1  MVRNWVERHIGILVQGWRSDGLTEKVKQTLWLRELRDFPVEMSMPKSGEIG 51

The following BLAST results are available for this feature:
BLAST of MELO3C013038 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093722|ref|XP_008447683.1|1.5e-21100.00PREDICTED: uncharacterized protein LOC103490094 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013038T1MELO3C013038T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013038Silver-seed gourdcarmeB0125
MELO3C013038Silver-seed gourdcarmeB0204
MELO3C013038Silver-seed gourdcarmeB0742
MELO3C013038Silver-seed gourdcarmeB0997
MELO3C013038Cucumber (Chinese Long) v3cucmeB068
MELO3C013038Cucumber (Chinese Long) v3cucmeB223
MELO3C013038Cucumber (Chinese Long) v3cucmeB572
MELO3C013038Watermelon (97103) v2mewmbB329
MELO3C013038Watermelon (97103) v2mewmbB344
MELO3C013038Watermelon (97103) v2mewmbB359
MELO3C013038Wax gourdmewgoB397
MELO3C013038Wax gourdmewgoB439
MELO3C013038Wax gourdmewgoB442
MELO3C013038Melon (DHL92) v3.5.1memeB086
MELO3C013038Melon (DHL92) v3.5.1memeB102
MELO3C013038Cucumber (Gy14) v1cgymeB560
MELO3C013038Cucumber (Gy14) v1cgymeB582
MELO3C013038Cucurbita maxima (Rimu)cmameB125
MELO3C013038Cucurbita maxima (Rimu)cmameB230
MELO3C013038Cucurbita maxima (Rimu)cmameB332
MELO3C013038Cucurbita maxima (Rimu)cmameB427
MELO3C013038Cucurbita maxima (Rimu)cmameB840
MELO3C013038Cucurbita moschata (Rifu)cmomeB118
MELO3C013038Cucurbita moschata (Rifu)cmomeB216
MELO3C013038Cucurbita moschata (Rifu)cmomeB325
MELO3C013038Cucurbita moschata (Rifu)cmomeB417
MELO3C013038Cucurbita moschata (Rifu)cmomeB823
MELO3C013038Wild cucumber (PI 183967)cpimeB066
MELO3C013038Wild cucumber (PI 183967)cpimeB220
MELO3C013038Wild cucumber (PI 183967)cpimeB561
MELO3C013038Cucumber (Chinese Long) v2cumeB065
MELO3C013038Cucumber (Chinese Long) v2cumeB228
MELO3C013038Cucumber (Chinese Long) v2cumeB554
MELO3C013038Watermelon (Charleston Gray)mewcgB307
MELO3C013038Watermelon (Charleston Gray)mewcgB329
MELO3C013038Watermelon (Charleston Gray)mewcgB342
MELO3C013038Watermelon (97103) v1mewmB339
MELO3C013038Watermelon (97103) v1mewmB356
MELO3C013038Watermelon (97103) v1mewmB363
MELO3C013038Cucurbita pepo (Zucchini)cpemeB132
MELO3C013038Cucurbita pepo (Zucchini)cpemeB306
MELO3C013038Cucurbita pepo (Zucchini)cpemeB518
MELO3C013038Cucurbita pepo (Zucchini)cpemeB573
MELO3C013038Bottle gourd (USVL1VR-Ls)lsimeB214
MELO3C013038Bottle gourd (USVL1VR-Ls)lsimeB411
MELO3C013038Bottle gourd (USVL1VR-Ls)lsimeB436
MELO3C013038Cucumber (Gy14) v2cgybmeB060
MELO3C013038Cucumber (Gy14) v2cgybmeB189
MELO3C013038Cucumber (Gy14) v2cgybmeB490