MELO3C013036 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013036
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionOrf101b
Locationchr4 : 16372871 .. 16373062 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

mRNA sequence

ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

Coding sequence (CDS)

ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

Protein sequence

MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWELEDP*
Homology
[Close]
BLAST of MELO3C013036 vs. TrEMBL
Match: G3EU45_CUCME (Putative uncharacterized protein ORF3 OS=Cucumis melo subsp. melo GN=ORF3 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.1e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

[Close]
BLAST of MELO3C013036 vs. TrEMBL
Match: B6VJZ2_VITVI (ORF145 OS=Vitis vinifera GN=orf145 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-15
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPG 120

[Close]
BLAST of MELO3C013036 vs. TrEMBL
Match: F6HWW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0854g00010 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.8e-15
Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF T RGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTSRGTGDGHLEAHHDLQARPARPG 120

[Close]
BLAST of MELO3C013036 vs. TrEMBL
Match: G9HNV3_PHODC (Orf192 OS=Phoenix dactylifera GN=orf192 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.8e-15
Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF T RGT D HLE +HDLQARPAR G
Sbjct: 64  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTSRGTGDGHLEAHHDLQARPARPG 116

[Close]
BLAST of MELO3C013036 vs. TrEMBL
Match: B9TA67_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2058770 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-14
Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVV LP FQRCLEDG DA+ER+PGSGF TGRGT D HLE +HDLQA PAR G
Sbjct: 29 VYVVALPAFQRCLEDGPDASERQPGSGFPTGRGTGDGHLEAHHDLQATPARPG 81

[Close]
BLAST of MELO3C013036 vs. NCBI nr
Match: gi|345034451|gb|AEN56135.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 90.9 bits (224), Expect = 8.8e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

[Close]
BLAST of MELO3C013036 vs. NCBI nr
Match: gi|224365683|ref|YP_002608410.1| (orf145 [Vitis vinifera])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-15
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPG 120

[Close]
BLAST of MELO3C013036 vs. NCBI nr
Match: gi|296083514|emb|CBI14783.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-15
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPG 120

[Close]
BLAST of MELO3C013036 vs. NCBI nr
Match: gi|372450240|ref|YP_005090393.1| (orf192 (mitochondrion) [Phoenix dactylifera])

HSP 1 Score: 87.4 bits (215), Expect = 9.7e-15
Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF T RGT D HLE +HDLQARPAR G
Sbjct: 64  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTSRGTGDGHLEAHHDLQARPARPG 116

[Close]
BLAST of MELO3C013036 vs. NCBI nr
Match: gi|223523941|gb|EEF27242.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-14
Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVV LP FQRCLEDG DA+ER+PGSGF TGRGT D HLE +HDLQA PAR G
Sbjct: 29 VYVVALPAFQRCLEDGPDASERQPGSGFPTGRGTGDGHLEAHHDLQATPARPG 81

The following BLAST results are available for this feature:
BLAST of MELO3C013036 vs. TrEMBL
Match NameE-valueIdentityDescription
G3EU45_CUCME6.1e-1681.13Putative uncharacterized protein ORF3 OS=Cucumis melo subsp. melo GN=ORF3 PE=4 S... [more]
B6VJZ2_VITVI1.4e-1579.25ORF145 OS=Vitis vinifera GN=orf145 PE=4 SV=1[more]
F6HWW2_VITVI6.8e-1577.36Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0854g00010 PE=4 SV=... [more]
G9HNV3_PHODC6.8e-1577.36Orf192 OS=Phoenix dactylifera GN=orf192 PE=4 SV=1[more]
B9TA67_RICCO1.2e-1475.47Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2058770 PE=4 SV=1[more]
BLAST of MELO3C013036 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|345034451|gb|AEN56135.1|8.8e-1681.13hypothetical protein [Cucumis melo subsp. melo][more]
gi|224365683|ref|YP_002608410.1|2.0e-1579.25orf145 [Vitis vinifera][more]
gi|296083514|emb|CBI14783.3|2.0e-1579.25unnamed protein product [Vitis vinifera][more]
gi|372450240|ref|YP_005090393.1|9.7e-1577.36orf192 (mitochondrion) [Phoenix dactylifera][more]
gi|223523941|gb|EEF27242.1|1.7e-1475.47conserved hypothetical protein [Ricinus communis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013036T1MELO3C013036T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013036Watermelon (97103) v1mewmB339
MELO3C013036Watermelon (97103) v1mewmB356
MELO3C013036Watermelon (97103) v1mewmB363
MELO3C013036Cucurbita pepo (Zucchini)cpemeB132
MELO3C013036Cucurbita pepo (Zucchini)cpemeB306
MELO3C013036Cucurbita pepo (Zucchini)cpemeB518
MELO3C013036Cucurbita pepo (Zucchini)cpemeB573
MELO3C013036Bottle gourd (USVL1VR-Ls)lsimeB214
MELO3C013036Bottle gourd (USVL1VR-Ls)lsimeB411
MELO3C013036Bottle gourd (USVL1VR-Ls)lsimeB436
MELO3C013036Cucumber (Gy14) v2cgybmeB060
MELO3C013036Cucumber (Gy14) v2cgybmeB189
MELO3C013036Cucumber (Gy14) v2cgybmeB490
MELO3C013036Silver-seed gourdcarmeB0125
MELO3C013036Silver-seed gourdcarmeB0204
MELO3C013036Silver-seed gourdcarmeB0742
MELO3C013036Silver-seed gourdcarmeB0997
MELO3C013036Cucumber (Chinese Long) v3cucmeB068
MELO3C013036Cucumber (Chinese Long) v3cucmeB223
MELO3C013036Cucumber (Chinese Long) v3cucmeB572
MELO3C013036Watermelon (97103) v2mewmbB329
MELO3C013036Watermelon (97103) v2mewmbB344
MELO3C013036Watermelon (97103) v2mewmbB359
MELO3C013036Wax gourdmewgoB397
MELO3C013036Wax gourdmewgoB439
MELO3C013036Wax gourdmewgoB442
MELO3C013036Melon (DHL92) v3.5.1memeB086
MELO3C013036Melon (DHL92) v3.5.1memeB102
MELO3C013036Cucumber (Gy14) v1cgymeB560
MELO3C013036Cucumber (Gy14) v1cgymeB582
MELO3C013036Cucurbita maxima (Rimu)cmameB125
MELO3C013036Cucurbita maxima (Rimu)cmameB230
MELO3C013036Cucurbita maxima (Rimu)cmameB332
MELO3C013036Cucurbita maxima (Rimu)cmameB427
MELO3C013036Cucurbita maxima (Rimu)cmameB840
MELO3C013036Cucurbita moschata (Rifu)cmomeB118
MELO3C013036Cucurbita moschata (Rifu)cmomeB216
MELO3C013036Cucurbita moschata (Rifu)cmomeB325
MELO3C013036Cucurbita moschata (Rifu)cmomeB417
MELO3C013036Cucurbita moschata (Rifu)cmomeB823
MELO3C013036Wild cucumber (PI 183967)cpimeB066
MELO3C013036Wild cucumber (PI 183967)cpimeB220
MELO3C013036Wild cucumber (PI 183967)cpimeB561
MELO3C013036Cucumber (Chinese Long) v2cumeB065
MELO3C013036Cucumber (Chinese Long) v2cumeB228
MELO3C013036Cucumber (Chinese Long) v2cumeB554
MELO3C013036Watermelon (Charleston Gray)mewcgB307
MELO3C013036Watermelon (Charleston Gray)mewcgB329
MELO3C013036Watermelon (Charleston Gray)mewcgB342