MELO3C012988 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTACCTTAGCAGGCTCTTAAGTCATTTGGAGTCCACTGGCGCCATCAAAGGAGTGTGCCTTGCCAATGATTGCAACATCTCGCATATCCTCTTCGCCGATGACATTCTTCTTTTTGTCGAAGATAATGACCTTTATCTGAAAAATCTTAGAATGGCTATTTCTTTGTTTGAAAAGGCATCTGGGCTCAAAATTAATTTATCAAAATCAGTTATGGTTCCAGTTAATGTCCCATGGCCTAGAGCTTTGGAGTGTGCTTCCTCTTGGGAAATATCTTGCCACACGCTTCCTCTAACCTACTTAGGTGTCCCCCTTGGAGGAAACCCAAAATCCAAACTTTTCTGGAGGAATATTGAGGACAGAATTCAAAAAAAGCTTAGCAACTGGAAATATGCTCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAATCTACTCTCAGTAGTCTCCCGATTTACCAACTATCTGTTTTCCAAGCTCCATCCTCCACGTATAAAAACATTGAAAAACTTTGGAGAAATTTCCTCTGGAAAGGTAGCTGCGGTTCAAAGGGGTCTCACTTAATCAACTGGGCAATAGTTACAAAGCCTAAAGAGGAAGGTGAGCTGGGCATCTCGAAACTCCAAATAACAAATCAAGCTCTCTTATCGAAGTGGCTTTGGCGCTACTATTCGGAGCCTAATTCTCTTTGGAGGAGACTCATCCATATTAAGTATCAAGGTAAACACCCAGGGGATATTCCTTCAAACATTTCCTCTAGCTCCCCTAAAGCTCCGTGGAGATCCATTATTAACAACATAGATTGGTTCAAAAGAAATCAAGGATGGGATTTGAACAATGGAGATCAAATCTCCTTCTGGTTTTCTAACTGGTCTCCAGAAGGTTGTCTTTTTACTGCCTATCCCAGACTCTTTGCCCTCTCTATCGACAAAGATTCCTCAATCAAAGATGTGTGGAACCCAAACAACAATCAATGGGAAATTACTTTTAGAAGAAAGTTGAATGATAGAGAAATTAGTACATGGTAGAGAATTTTAGGGAATCTTCCAGTTCCAAGAACAAACAGAGGTCCAAGTAAACCTACCTGGATTCCCGACAGCAAGAAATCCTTCTTTATCGCCTCTGCTAAAAGTTGTATCTACCATCAGCCGGAGCTTTCGATAGCGAATCCTCGAGTAAAGCTGCTTGATCTTATCTGGAAATCATTCATTCCTATGAAGATAAAATTCTTCCTGTGGTGCCTGGTTCAAAGAAAGCTAAACACAATGGAGGTCATTCAGCAAAGAATGCCAAATTCGCTTCTTCAACCAAATTGGTGTGTGCTTTGCAAGAAAGATAGCGAAACGGGAGCTCACCTGTTCTTCCATTGTGATCTGGTGAAACACCTGTGGTCCCTCCTCCAGCGATCTCTCAATTTTGCCCCTTTTTCCGATGACTTTGAAGCGTTGTTCTCCTTCTTCCTCTCCCTAAATCAATCCCTCCCAAAGCATAAGGTCGTTTTCTGTGGTTTGATAGCTGTCCTTTGGGGCATTTGGGCAGAGAGAAATAATAGAATTTTTGATACTTTAAGTTATCAAAAATCTATTAATAATTTATGGGAAGACTACAAAATTCTCATAGGAAATTGGTGTAGTAGGGATCCTACTTTCAAAAATTATTCAGCAACTACTATCGCTCTTAATCTTAATGCTCTATGTAATTAG ATGGATTACCTTAGCAGGCTCTTAAGTCATTTGGAGTCCACTGGCGCCATCAAAGGAGTGTGCCTTGCCAATGATTGCAACATCTCGCATATCCTCTTCGCCGATGACATTCTTCTTTTTGTCGAAGATAATGACCTTTATCTGAAAAATCTTAGAATGGCTATTTCTTTGTTTGAAAAGGCATCTGGGCTCAAAATTAATTTATCAAAATCAGTTATGGTTCCAGTTAATGTCCCATGGCCTAGAGCTTTGGAGTGTGCTTCCTCTTGGGAAATATCTTGCCACACGCTTCCTCTAACCTACTTAGGTGTCCCCCTTGGAGGAAACCCAAAATCCAAACTTTTCTGGAGGAATATTGAGGACAGAATTCAAAAAAAGCTTAGCAACTGGAAATATGCTCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAATCTACTCTCAGTAGTCTCCCGATTTACCAACTATCTGTTTTCCAAGCTCCATCCTCCACGTATAAAAACATTGAAAAACTTTGGAGAAATTTCCTCTGGAAAGGTAGCTGCGGTTCAAAGGGGTCTCACTTAATCAACTGGGCAATAGTTACAAAGCCTAAAGAGGAAGGTGAGCTGGGCATCTCGAAACTCCAAATAACAAATCAAGCTCTCTTATCGAAGTGGCTTTGGCGCTACTATTCGGAGCCTAATTCTCTTTGGAGGAGACTCATCCATATTAAGTATCAAGGTAAACACCCAGGGGATATTCCTTCAAACATTTCCTCTAGCTCCCCTAAAGCTCCGTGGAGATCCATTATTAACAACATAGATTGGTTCAAAAGAAATCAAGGATGGGATTTGAACAATGGAGATCAAATCTCCTTCTGGTTTTCTAACTGGTCTCCAGAAGCAACTACTATCGCTCTTAATCTTAATGCTCTATGTAATTAG ATGGATTACCTTAGCAGGCTCTTAAGTCATTTGGAGTCCACTGGCGCCATCAAAGGAGTGTGCCTTGCCAATGATTGCAACATCTCGCATATCCTCTTCGCCGATGACATTCTTCTTTTTGTCGAAGATAATGACCTTTATCTGAAAAATCTTAGAATGGCTATTTCTTTGTTTGAAAAGGCATCTGGGCTCAAAATTAATTTATCAAAATCAGTTATGGTTCCAGTTAATGTCCCATGGCCTAGAGCTTTGGAGTGTGCTTCCTCTTGGGAAATATCTTGCCACACGCTTCCTCTAACCTACTTAGGTGTCCCCCTTGGAGGAAACCCAAAATCCAAACTTTTCTGGAGGAATATTGAGGACAGAATTCAAAAAAAGCTTAGCAACTGGAAATATGCTCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAATCTACTCTCAGTAGTCTCCCGATTTACCAACTATCTGTTTTCCAAGCTCCATCCTCCACGTATAAAAACATTGAAAAACTTTGGAGAAATTTCCTCTGGAAAGGTAGCTGCGGTTCAAAGGGGTCTCACTTAATCAACTGGGCAATAGTTACAAAGCCTAAAGAGGAAGGTGAGCTGGGCATCTCGAAACTCCAAATAACAAATCAAGCTCTCTTATCGAAGTGGCTTTGGCGCTACTATTCGGAGCCTAATTCTCTTTGGAGGAGACTCATCCATATTAAGTATCAAGGTAAACACCCAGGGGATATTCCTTCAAACATTTCCTCTAGCTCCCCTAAAGCTCCGTGGAGATCCATTATTAACAACATAGATTGGTTCAAAAGAAATCAAGGATGGGATTTGAACAATGGAGATCAAATCTCCTTCTGGTTTTCTAACTGGTCTCCAGAAGCAACTACTATCGCTCTTAATCTTAATGCTCTATGTAATTAG MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLKNLRMAISLFEKASGLKINLSKSVMVPVNVPWPRALECASSWEISCHTLPLTYLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHLINWAIVTKPKEEGELGISKLQITNQALLSKWLWRYYSEPNSLWRRLIHIKYQGKHPGDIPSNISSSSPKAPWRSIINNIDWFKRNQGWDLNNGDQISFWFSNWSPEATTIALNLNALCN*
BLAST of MELO3C012988 vs. Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.2e-27 Identity = 67/178 (37.64%), Postives = 93/178 (52.25%), Query Frame = 1
BLAST of MELO3C012988 vs. Swiss-Prot
Match: LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.1e-10 Identity = 53/223 (23.77%), Postives = 102/223 (45.74%), Query Frame = 1
BLAST of MELO3C012988 vs. TrEMBL
Match: M5XHS0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020085mg PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59 Identity = 119/295 (40.34%), Postives = 170/295 (57.63%), Query Frame = 1
BLAST of MELO3C012988 vs. TrEMBL
Match: M5WKV4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015607mg PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59 Identity = 119/295 (40.34%), Postives = 170/295 (57.63%), Query Frame = 1
BLAST of MELO3C012988 vs. TrEMBL
Match: M5VS59_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016504mg PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.7e-59 Identity = 119/295 (40.34%), Postives = 169/295 (57.29%), Query Frame = 1
BLAST of MELO3C012988 vs. TrEMBL
Match: M5X4S0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021750mg PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.4e-57 Identity = 118/295 (40.00%), Postives = 168/295 (56.95%), Query Frame = 1
BLAST of MELO3C012988 vs. TrEMBL
Match: A5B7T2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013126 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56 Identity = 122/318 (38.36%), Postives = 180/318 (56.60%), Query Frame = 1
BLAST of MELO3C012988 vs. TAIR10
Match: AT3G24255.1 (AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein) HSP 1 Score: 81.6 bits (200), Expect = 9.1e-16 Identity = 44/144 (30.56%), Postives = 71/144 (49.31%), Query Frame = 1
BLAST of MELO3C012988 vs. NCBI nr
Match: gi|659093714|ref|XP_008447678.1| (PREDICTED: uncharacterized protein LOC103490087 [Cucumis melo]) HSP 1 Score: 618.2 bits (1593), Expect = 7.6e-174 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1
BLAST of MELO3C012988 vs. NCBI nr
Match: gi|659130833|ref|XP_008465376.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo]) HSP 1 Score: 350.5 bits (898), Expect = 3.0e-93 Identity = 171/292 (58.56%), Postives = 207/292 (70.89%), Query Frame = 1
BLAST of MELO3C012988 vs. NCBI nr
Match: gi|659086627|ref|XP_008444035.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo]) HSP 1 Score: 292.4 bits (747), Expect = 9.6e-76 Identity = 138/177 (77.97%), Postives = 154/177 (87.01%), Query Frame = 1
BLAST of MELO3C012988 vs. NCBI nr
Match: gi|659096604|ref|XP_008449185.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo]) HSP 1 Score: 262.7 bits (670), Expect = 8.1e-67 Identity = 132/239 (55.23%), Postives = 163/239 (68.20%), Query Frame = 1
BLAST of MELO3C012988 vs. NCBI nr
Match: gi|595831294|ref|XP_007206246.1| (hypothetical protein PRUPE_ppa015607mg, partial [Prunus persica]) HSP 1 Score: 237.3 bits (604), Expect = 3.7e-59 Identity = 119/295 (40.34%), Postives = 170/295 (57.63%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |