MELO3C012980 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCTTAA ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCTTAA ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAGTGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGACTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGTAGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGATTCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCTTAA MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCP*
BLAST of MELO3C012980 vs. TrEMBL
Match: A0A061DM48_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_002389 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.0e-22 Identity = 69/190 (36.32%), Postives = 100/190 (52.63%), Query Frame = 1
BLAST of MELO3C012980 vs. TrEMBL
Match: A0A061E8N3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010930 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.9e-21 Identity = 69/190 (36.32%), Postives = 98/190 (51.58%), Query Frame = 1
BLAST of MELO3C012980 vs. TrEMBL
Match: A0A061EFL3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_018989 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 9.6e-21 Identity = 67/190 (35.26%), Postives = 98/190 (51.58%), Query Frame = 1
BLAST of MELO3C012980 vs. TrEMBL
Match: A0A061DPM2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_003960 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19 Identity = 64/198 (32.32%), Postives = 106/198 (53.54%), Query Frame = 1
BLAST of MELO3C012980 vs. TrEMBL
Match: A0A061EFF5_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_010953 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.4e-19 Identity = 62/197 (31.47%), Postives = 104/197 (52.79%), Query Frame = 1
BLAST of MELO3C012980 vs. NCBI nr
Match: gi|659093710|ref|XP_008447676.1| (PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo]) HSP 1 Score: 332.0 bits (850), Expect = 5.9e-88 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of MELO3C012980 vs. NCBI nr
Match: gi|659130442|ref|XP_008465174.1| (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]) HSP 1 Score: 298.9 bits (764), Expect = 5.5e-78 Identity = 150/165 (90.91%), Postives = 154/165 (93.33%), Query Frame = 1
BLAST of MELO3C012980 vs. NCBI nr
Match: gi|659114599|ref|XP_008457136.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496882 [Cucumis melo]) HSP 1 Score: 282.7 bits (722), Expect = 4.1e-73 Identity = 144/168 (85.71%), Postives = 152/168 (90.48%), Query Frame = 1
BLAST of MELO3C012980 vs. NCBI nr
Match: gi|659102853|ref|XP_008452348.1| (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo]) HSP 1 Score: 259.2 bits (661), Expect = 4.8e-66 Identity = 139/172 (80.81%), Postives = 144/172 (83.72%), Query Frame = 1
BLAST of MELO3C012980 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo]) HSP 1 Score: 222.2 bits (565), Expect = 6.5e-55 Identity = 124/172 (72.09%), Postives = 130/172 (75.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |