MELO3C012949 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C012949
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUbiquitin carboxyl-terminal hydrolase 7
Locationchr4 : 15017197 .. 15017628 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACCTCATTGAAGTTAAGGTCAAAGTTAGATATAACTACGCAGGATTTGTGCCAGCATCCGTTCTTATCTCTGATGATCAAGGAGTAGAATATGTTGTATACATTGTTCCTCCACCTGATGGTAGGTGGTTTGTGGAAAGGAATGTTAGTTTCCATGGTTCTTTCAAAACTAAAGCAACTGATGAATTTGATGAACACAATCCTCAAGCTAAAGCATATTCCTTTGTCCGAATTCATGCAGTGCCATTGGAAACAACCAAGTTTGAAACGAGAACCAAATCTGTTAAGTTTGACTGGCCATCTGATTTGGATCCCCCACAAACCAAGAAAGACAGCTCGTCTGATTTAGAATATGACCCCTTTGATCAACAAATCTGTGATAGAAGGAAAGAGAAAGGGAAAGCAATTATGTCCATTAATGAATAG

mRNA sequence

ATGGAAAACCTCATTGAAGTTAAGGTCAAAGTTAGATATAACTACGCAGGATTTGTGCCAGCATCCGTTCTTATCTCTGATGATCAAGGAGTAGAATATGTTGTATACATTGTTCCTCCACCTGATGGTAGGTGGTTTGTGGAAAGGAATGTTAGTTTCCATGGTTCTTTCAAAACTAAAGCAACTGATGAATTTGATGAACACAATCCTCAAGCTAAAGCATATTCCTTTGTCCGAATTCATGCAGTGCCATTGGAAACAACCAAGTTTGAAACGAGAACCAAATCTGTTAAGTTTGACTGGCCATCTGATTTGGATCCCCCACAAACCAAGAAAGACAGCTCGTCTGATTTAGAATATGACCCCTTTGATCAACAAATCTGTGATAGAAGGAAAGAGAAAGGGAAAGCAATTATGTCCATTAATGAATAG

Coding sequence (CDS)

ATGGAAAACCTCATTGAAGTTAAGGTCAAAGTTAGATATAACTACGCAGGATTTGTGCCAGCATCCGTTCTTATCTCTGATGATCAAGGAGTAGAATATGTTGTATACATTGTTCCTCCACCTGATGGTAGGTGGTTTGTGGAAAGGAATGTTAGTTTCCATGGTTCTTTCAAAACTAAAGCAACTGATGAATTTGATGAACACAATCCTCAAGCTAAAGCATATTCCTTTGTCCGAATTCATGCAGTGCCATTGGAAACAACCAAGTTTGAAACGAGAACCAAATCTGTTAAGTTTGACTGGCCATCTGATTTGGATCCCCCACAAACCAAGAAAGACAGCTCGTCTGATTTAGAATATGACCCCTTTGATCAACAAATCTGTGATAGAAGGAAAGAGAAAGGGAAAGCAATTATGTCCATTAATGAATAG

Protein sequence

MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFDWPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE*
Homology
[Close]
BLAST of MELO3C012949 vs. TrEMBL
Match: A0A0A0LH82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-08
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 1 

Query: 18 FVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSF 77
          FVPA + I+DD G  + + IV    G+W VERNV  HG FK++AT  F E NP AK ++F
Sbjct: 8  FVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNAKQFTF 67

Query: 78 VRIHAVP 85
          +    +P
Sbjct: 68 IGSEGLP 74

[Close]
BLAST of MELO3C012949 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-08
Identity = 27/77 (35.06%), Postives = 48/77 (62.34%), Query Frame = 1 

Query: 1   MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTK 60
           + +LIE  ++V+ NY+GF+PA + + D +   Y++ ++   +G+W + RN S HG+F  +
Sbjct: 253 LTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTRE 312

Query: 61  ATDEFDEHNPQAKAYSF 78
           A   FDE N  ++ Y F
Sbjct: 313 AARRFDEFNLNSEQYFF 329

[Close]
BLAST of MELO3C012949 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-16
Identity = 48/114 (42.11%), Postives = 73/114 (64.04%), Query Frame = 1 

Query: 2   ENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKA 61
           +NLIE K+K+RYNY+GF+PA+V I D++G ++ + +V  P+G+W +ERNV  HG+FK +A
Sbjct: 327 KNLIEAKIKIRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQA 386

Query: 62  TDEFDEHNPQAKAYSFVRIHAVPLE--TTKFETRTKSVKFDWPSDLDPPQTKKD 114
              FDE NP+++ + F  + A+  +   T  + R KS   D PS L     K D
Sbjct: 387 AAAFDEFNPESEQFFFEGMEAISPDFLATSSDGR-KSSTPDQPSALKSVIIKPD 439

[Close]
BLAST of MELO3C012949 vs. NCBI nr
Match: gi|700205999|gb|KGN61118.1| (hypothetical protein Csa_2G055060 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-08
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 1 

Query: 18 FVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSF 77
          FVPA + I+DD G  + + IV    G+W VERNV  HG FK++AT  F E NP AK ++F
Sbjct: 8  FVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNAKQFTF 67

Query: 78 VRIHAVP 85
          +    +P
Sbjct: 68 IGSEGLP 74

[Close]
BLAST of MELO3C012949 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-08
Identity = 27/77 (35.06%), Postives = 48/77 (62.34%), Query Frame = 1 

Query: 1   MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTK 60
           + +LIE  ++V+ NY+GF+PA + + D +   Y++ ++   +G+W + RN S HG+F  +
Sbjct: 253 LTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTRE 312

Query: 61  ATDEFDEHNPQAKAYSF 78
           A   FDE N  ++ Y F
Sbjct: 313 AARRFDEFNLNSEQYFF 329

The following BLAST results are available for this feature:
BLAST of MELO3C012949 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH82_CUCSA1.2e-0846.27Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1[more]
E5GB30_CUCME1.6e-0835.06Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C012949 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071590|ref|XP_008460776.1|1.8e-1642.11PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me... [more]
gi|700205999|gb|KGN61118.1|1.8e-0846.27hypothetical protein Csa_2G055060 [Cucumis sativus][more]
gi|307135793|gb|ADN33672.1|2.3e-0835.06hypothetical protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012949T1MELO3C012949T1mRNA