MELO3C012892 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C012892
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZeaxanthin epoxidase, chloroplastic
Locationchr4 : 14083929 .. 14084659 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACCTTTCTTCAAATAGGAAATGCATGCGGGGGTCTGCAGGAAGTCGACAAAACAATGATGAACATGGACAACCTCCTTGAGGCAAAGATTAAGGTTAGATACAACTATAATGGATTCATCCCAACTGCCATTAGAATCAAAGACAAAGATGGTCATTTTTTTGTGGTAAACACTAGGGGTGAGCATGGTAGGTCGAAAAACCGAAACGAACGACCGAAACCGAACAAATCGACGTCGATCAGGCAAAAAAGCAATGCAGGTCGGTCGGATTCGGTTTATTAAAATTTGTGAACTGGGTTTTTCGGCCGGTTTAAAGCTTAGGGTCGGTTGGTTTACCAAACTGACCAAACCGACCCTTTTTTTAAAAAAAATTATATATATATTATTTTATAAAATTAGGTTATAATTTTTTCTCTCCCTCGCCAGTCGTCGCCTCCCTCCCTCACGCTCGCCAAATCGCCATCACCATCTCCCTCACGCTTTCGCCGGTGAAAAGTTCGTCATCTCCTTCACAATATCCTACCGTTCGTCATTTCACTGCCGGCCGTTCCAAGTTGCAGGTTTCGTTCGTCATTCCGTCGTCGGTTGTCCCTCAAAATCATCCCGCCGTTCGTCATCTCCCTCACAGTCATCTCCAATCGCAAGTTACAGTCGGTCGTTCATCATCTGCCGTCGATCGTTCATCATCTCCAATCGCAAGTTGCCCTCTTCGCCGCTGTTGGTAA

mRNA sequence

ATGGACACCTTTCTTCAAATAGGAAATGCATGCGGGGGTCTGCAGGAAGTCGACAAAACAATGATGAACATGGACAACCTCCTTGAGGCAAAGATTAAGGTTAGATACAACTATAATGGATTCATCCCAACTGCCATTAGAATCAAAGACAAAGATGGTCATTTTTTTGTGGTAAACACTAGGGGTGAGCATGGTAGGTCGAAAAACCGAAACGAACGACCGAAACCGAACAAATCGACGTCGATCAGGCAAAAAAGCAATGCAGTCGTCGCCTCCCTCCCTCACGCTCGCCAAATCGCCATCACCATCTCCCTCACGCTTTCGCCGGTGAAAAGTTCGTCATCTCCTTCACAATATCCTACCGTTCGTCATTTCACTGCCGGCCGTTCCAAGTTGCAGGTTTCGTTCGTCATTCCGTCGTCGGTTGTCCCTCAAAATCATCCCGCCGTTCGTCATCTCCCTCACAGTCATCTCCAATCGCAAGTTACAGTCGGTCGTTCATCATCTGCCGTCGATCGTTCATCATCTCCAATCGCAAGTTGCCCTCTTCGCCGCTGTTGGTAA

Coding sequence (CDS)

ATGGACACCTTTCTTCAAATAGGAAATGCATGCGGGGGTCTGCAGGAAGTCGACAAAACAATGATGAACATGGACAACCTCCTTGAGGCAAAGATTAAGGTTAGATACAACTATAATGGATTCATCCCAACTGCCATTAGAATCAAAGACAAAGATGGTCATTTTTTTGTGGTAAACACTAGGGGTGAGCATGGTAGGTCGAAAAACCGAAACGAACGACCGAAACCGAACAAATCGACGTCGATCAGGCAAAAAAGCAATGCAGTCGTCGCCTCCCTCCCTCACGCTCGCCAAATCGCCATCACCATCTCCCTCACGCTTTCGCCGGTGAAAAGTTCGTCATCTCCTTCACAATATCCTACCGTTCGTCATTTCACTGCCGGCCGTTCCAAGTTGCAGGTTTCGTTCGTCATTCCGTCGTCGGTTGTCCCTCAAAATCATCCCGCCGTTCGTCATCTCCCTCACAGTCATCTCCAATCGCAAGTTACAGTCGGTCGTTCATCATCTGCCGTCGATCGTTCATCATCTCCAATCGCAAGTTGCCCTCTTCGCCGCTGTTGGTAA

Protein sequence

MDTFLQIGNACGGLQEVDKTMMNMDNLLEAKIKVRYNYNGFIPTAIRIKDKDGHFFVVNTRGEHGRSKNRNERPKPNKSTSIRQKSNAVVASLPHARQIAITISLTLSPVKSSSSPSQYPTVRHFTAGRSKLQVSFVIPSSVVPQNHPAVRHLPHSHLQSQVTVGRSSSAVDRSSSPIASCPLRRCW*
Homology
[Close]
BLAST of MELO3C012892 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 25/58 (43.10%), Postives = 42/58 (72.41%), Query Frame = 1 

Query: 1   MDTFLQIGNACGGLQEVDKTMMNMDNLLEAKIKVRYNYNGFIPTAIRIKDKDGHFFVV 59
           +++F+QIG+ACGG  EV K    + +L+EA I+V+ NY+GFIP  I++ DK+   +++
Sbjct: 230 LESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYII 287

[Close]
BLAST of MELO3C012892 vs. NCBI nr
Match: gi|659113935|ref|XP_008456828.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 75/126 (59.52%), Postives = 88/126 (69.84%), Query Frame = 1 

Query: 60  TRGEHGRSKNRNERPKPNKSTSIRQKSNAVVASLPHARQIAITISLTLSPV-------KS 119
           +RGEHGRSKNRNERPKPN++ S+ +K   + +S P    + +T S + SP+        S
Sbjct: 79  SRGEHGRSKNRNERPKPNETMSVGRKR--MQSSPP---SLTLTKSPSPSPILPHGFATAS 138

Query: 120 SSSPSQYPTVRHFTAGRSKLQVSFVIPSSVVPQNHPAVRHLPHSHLQSQVTVGRSSSAVD 179
           SSSP QYP VR+  AGRSKLQ  FVIPSSVVP NHP VRHL HSHLQSQ  VGR SS VD
Sbjct: 139 SSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVD 198

[Close]
BLAST of MELO3C012892 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 2.8e-09
Identity = 50/143 (34.97%), Postives = 69/143 (48.25%), Query Frame = 1 

Query: 1   MDTFLQIGNACGGLQEVDKTMMNMDNLLEAKIKVRYNYNGFIPTAIRIKDKDGHFFVVNT 60
           M TF QIG ACGGL +V +   +  NL+EAKIK+RYNY+GF+P  +RI D +G+ F +  
Sbjct: 303 MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPANVRIFDNEGNKFSIQV 362

Query: 61  RGEHGRSKNRNERPKPNKSTSIRQKSNAVVASLPHARQ--------IAITISLTLSPVKS 120
              H   K   ER      T  RQ + A     P + Q        I+     T S  + 
Sbjct: 363 -VTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLATSSDGRK 422

Query: 121 SSSPSQYPTVRHFTAGRSKLQVS 136
           SS+P Q   ++       K+  S
Sbjct: 423 SSTPDQPSALKSVIIKPDKIATS 444

[Close]
BLAST of MELO3C012892 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 25/58 (43.10%), Postives = 42/58 (72.41%), Query Frame = 1 

Query: 1   MDTFLQIGNACGGLQEVDKTMMNMDNLLEAKIKVRYNYNGFIPTAIRIKDKDGHFFVV 59
           +++F+QIG+ACGG  EV K    + +L+EA I+V+ NY+GFIP  I++ DK+   +++
Sbjct: 230 LESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYII 287

The following BLAST results are available for this feature:
BLAST of MELO3C012892 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GB30_CUCME2.0e-0643.10Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C012892 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113935|ref|XP_008456828.1|1.0e-2759.52PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo][more]
gi|659071590|ref|XP_008460776.1|2.8e-0934.97PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me... [more]
gi|307135793|gb|ADN33672.1|2.9e-0643.10hypothetical protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012892T1MELO3C012892T1mRNA