MELO3C012884.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012884.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	rho-N domain-containing protein 1, chloroplastic isoform X9
Location	chr04 : 13933833 .. 13935308 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATAGCAGATGCCTACCATGCTCTAGAGTTTTAGTACGAGCAACCCGTTCTCTTTTTGCTCTTTATGTGCTAAACATGGAATCAATATACCAGTCAAATTTAGACCTCCAAATTGTACTTCGTTAGGGGGGTCTTTTACGTACAAAGCCAGCTCAGGTCACAGGAGAAACCCAGATTTCCCAAAGCAATATAGGTATGGTTTCTCAAGAAGCAGAAATAGGAAAAATGAGGAGAGAGAGAGAGAGTCTTGAAAATGTTGATGAATCGGATTTATTATCGTCCAAGAATGGACCATTACTTTCCATCTCTAGTACCCAAAAATCTTAGGCCACTGCTACATCAGGCCCAATGGAAAAGGAAATTGTTTTGAACTTTTCAAAAAGGTTCAAGCTCAGCTTCGATAATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACGAAAGGAAGCAAGACAGTAGATTCTCTTCTTAAGCTATTGTGAAAGCATGCGGTGGAACAAGGGAAGAGAAGTAGTGGTGCGGGTGGTAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGGATGGTCCTTATGATGAAGGAAGAGGCTCAAGCACTTTTAGCCTAGGTCCCAATTTGAGAGAGAAGGCCTAAGAACTTACAGGTTCTTTCAATAGACCTACATCAAATTTTCAACGTAGATCTACCATTCCTCGGGTGAGGTATCAACCAATTTACCCTGGGAAAGTATTGTTGACTCAACCAACTGTATGAATTCGAAAGGTGTAAAACTTAATGGAACTAAAACATGTTCTCAAGTGAAAGCAAATGTATGGACTCGACAGGAGTCAGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAAAAGGACAAAACAGAAGCTAGAGGTAGACCAAGAGTTTGAAATGGAACCAGATGAGGAAACATATGATCTAGAGCATGAAGCTGATGAAATGGTGCCTGAACTTATTAATTTGTTAGGCGTGTCATCAGACGTCGATGACACGTTTGAGGATGATATTAAAGACACTGAGGAATTTTCAAAGCATGGTGAACATGAGAACTTAAACTCATGGAAACTTGCTAAACTAAGGGTGATTGCTAAATCTCGTAGTTTGAAAGGGTTTTCGAAGATGAAGAAGAGCAAGCTTATGCAATTGTTAAGCAAAGATCATTGAGGATGTCATGCTGGATAGGAACCTCTGGATTTAGAATGTTTAGGTATCTTTTTTTACTTTTTTTTATTTTATTTTTCTTGTGCTTATCAATCTGTTTGACCAATTTTGAGTTAGAAACTGGTATTAGCTTTACAAACTCTTTACCATATTGTATATTAGGCTAATTTTTGCAGGCTCGGAGTATATGTCAACTTTAGTTTTTTCTATTCTATTCAGATTCTTGTTCACTTATACGAACCATTTTTTAATTGCTAACATGGTTCTCAAGCCTTTCCATCATGTTGGTCTGT

mRNA sequence

AGATAGCAGATGCCTACCATGCTCTAGAGTTTTAGTACGAGCAACCCGTTCTCTTTTTGCTCTTTATGTGCTAAACATGGAATCAATATACCAGTCAAATTTAGACCTCCAAATTGTACTTCGTTAGGGGGGTCTTTTACGTACAAAGCCAGCTCAGGTCACAGGAGAAACCCAGATTTCCCAAAGCAATATAGGTATGGTTTCTCAAGAAGCAGAAATAGGAAAAATGAGGAGAGAGAGAGAGAGTCTTGAAAATGTTGATGAATCGGATTTATTATCGTCCAAGAATGGACCATTACTTTCCATCTCTAGTACCCAAAAATCTTAGGCCACTGCTACATCAGGCCCAATGGAAAAGGAAATTGTTTTGAACTTTTCAAAAAGGTTCAAGCTCAGCTTCGATAATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACGAAAGGAAGCAAGACAGTAGATTCTCTTCTTAAGCTATTGTGAAAGCATGCGGTGGAACAAGGGAAGAGAAGTAGTGGTGCGGGTGGTAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGGATGGTCCTTATGATGAAGGAAGAGGCTCAAGCACTTTTAGCCTAGGTCCCAATTTGAGAGAGAAGGCCTAAGAACTTACAGGTTCTTTCAATAGACCTACATCAAATTTTCAACGTAGATCTACCATTCCTCGGGTGAGGTATCAACCAATTTACCCTGGGAAAGTATTGTTGACTCAACCAACTGTATGAATTCGAAAGGTGTAAAACTTAATGGAACTAAAACATGTTCTCAAGTGAAAGCAAATGTATGGACTCGACAGGAGTCAGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAAAAGGACAAAACAGAAGCTAGAGGTAGACCAAGAGTTTGAAATGGAACCAGATGAGGAAACATATGATCTAGAGCATGAAGCTGATGAAATGGTGCCTGAACTTATTAATTTGTTAGGCGTGTCATCAGACGTCGATGACACGTTTGAGGATGATATTAAAGACACTGAGGAATTTTCAAAGCATGGTGAACATGAGAACTTAAACTCATGGAAACTTGCTAAACTAAGGGTGATTGCTAAATCTCGTAGTTTGAAAGGGTTTTCGAAGATGAAGAAGAGCAAGCTTATGCAATTGTTAAGCAAAGATCATTGAGGATGTCATGCTGGATAGGAACCTCTGGATTTAGAATGTTTAGGTATCTTTTTTTACTTTTTTTTATTTTATTTTTCTTGTGCTTATCAATCTGTTTGACCAATTTTGAGTTAGAAACTGGTATTAGCTTTACAAACTCTTTACCATATTGTATATTAGGCTAATTTTTGCAGGCTCGGAGTATATGTCAACTTTAGTTTTTTCTATTCTATTCAGATTCTTGTTCACTTATACGAACCATTTTTTAATTGCTAACATGGTTCTCAAGCCTTTCCATCATGTTGGTCTGT

Coding sequence (CDS)

ATGAATTCGAAAGGTGTAAAACTTAATGGAACTAAAACATGTTCTCAAGTGAAAGCAAATGTATGGACTCGACAGGAGTCAGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAAAAGGACAAAACAGAAGCTAGAGGTAGACCAAGAGTTTGAAATGGAACCAGATGAGGAAACATATGATCTAGAGCATGAAGCTGATGAAATGGTGCCTGAACTTATTAATTTGTTAGGCGTGTCATCAGACGTCGATGACACGTTTGAGGATGATATTAAAGACACTGAGGAATTTTCAAAGCATGGTGAACATGAGAACTTAAACTCATGGAAACTTGCTAAACTAAGGGTGATTGCTAAATCTCGTAGTTTGAAAGGGTTTTCGAAGATGAAGAAGAGCAAGCTTATGCAATTGTTAAGCAAAGATCATTGA

Protein sequence

MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETYDLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKSRSLKGFSKMKKSKLMQLLSKDH

Homology

[Close]

BLAST of MELO3C012884.2 vs. NCBI nr
Match: XP_008447417.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 3.9e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 287 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 346

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 347 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 406

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 407 RSLRGFSKMKKSELVQLLSNSH 428

[Close]

BLAST of MELO3C012884.2 vs. NCBI nr
Match: XP_008447418.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X5 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 3.9e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 283 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 342

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 343 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 402

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 403 RSLRGFSKMKKSELVQLLSNSH 424

[Close]

BLAST of MELO3C012884.2 vs. NCBI nr
Match: XP_008447419.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X6 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 3.9e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 281 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 340

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 341 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 400

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 401 RSLRGFSKMKKSELVQLLSNSH 422

[Close]

BLAST of MELO3C012884.2 vs. NCBI nr
Match: XP_008447421.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 3.9e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 272 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 331

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 332 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 391

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 392 RSLRGFSKMKKSELVQLLSNSH 413

[Close]

BLAST of MELO3C012884.2 vs. NCBI nr
Match: XP_008447422.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X8 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 3.9e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 270 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 329

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 330 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 389

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 390 RSLRGFSKMKKSELVQLLSNSH 411

[Close]

BLAST of MELO3C012884.2 vs. TAIR10
Match: AT1G06190.1 (Rho termination factor)

HSP 1 Score: 40.8 bits (94), Expect = 8.1e-04
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 104 ENLNSWKLAKLRVIAKSRSLKGFSKMKKSKLMQLLSKD 142
           ++L+  KL +LR IAKSR LKG SKMKK++L++LL  D
Sbjct: 362 KDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGSD 399

[Close]

BLAST of MELO3C012884.2 vs. TrEMBL
Match: tr|A0A1S3BI13|A0A1S3BI13_CUCME (rho-N domain-containing protein 1, chloroplastic isoform X9 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 267 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 326

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 327 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 386

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 387 RSLRGFSKMKKSELVQLLSNSH 408

[Close]

BLAST of MELO3C012884.2 vs. TrEMBL
Match: tr|A0A1S4DXI1|A0A1S4DXI1_CUCME (rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 286 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 345

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 346 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 405

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 406 RSLRGFSKMKKSELVQLLSNSH 427

[Close]

BLAST of MELO3C012884.2 vs. TrEMBL
Match: tr|A0A1S3BIA8|A0A1S3BIA8_CUCME (rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 281 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 340

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 341 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 400

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 401 RSLRGFSKMKKSELVQLLSNSH 422

[Close]

BLAST of MELO3C012884.2 vs. TrEMBL
Match: tr|A0A1S3BHF2|A0A1S3BHF2_CUCME (rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 272 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 331

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 332 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 391

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 392 RSLRGFSKMKKSELVQLLSNSH 413

[Close]

BLAST of MELO3C012884.2 vs. TrEMBL
Match: tr|A0A1S3BHD7|A0A1S3BHD7_CUCME (rho-N domain-containing protein 1, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36
Identity = 93/142 (65.49%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MNSKGVKLNGTKTCSQVKANVWTRQESEREHWEELQSQKRTKQKLEVDQEFEMEPDEETY 60
           MNSKG+KLNGT+T SQ+KA VWTRQE                                TY
Sbjct: 287 MNSKGMKLNGTETGSQLKAKVWTRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTY 346

Query: 61  DLEHEADEMVPELINLLGVSSDVDDTFEDDIKDTEEFSKHGEHENLNSWKLAKLRVIAKS 120
           DLEHEADEM PEL+NLLGVSSD+DDTFEDDIKD EEFSKHGEHENLNS KLA+LR IAKS
Sbjct: 347 DLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKS 406

Query: 121 RSLKGFSKMKKSKLMQLLSKDH 143
           RSL+GFSKMKKS+L+QLLS  H
Sbjct: 407 RSLRGFSKMKKSELVQLLSNSH 428

The following BLAST results are available for this feature:

BLAST of MELO3C012884.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447417.1	3.9e-36	65.49	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X3 [Cucumis ...	[more]
XP_008447418.1	3.9e-36	65.49	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X5 [Cucumis ...	[more]
XP_008447419.1	3.9e-36	65.49	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X6 [Cucumis ...	[more]
XP_008447421.1	3.9e-36	65.49	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis ...	[more]
XP_008447422.1	3.9e-36	65.49	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X8 [Cucumis ...	[more]

BLAST of MELO3C012884.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06190.1	8.1e-04	57.89	Rho termination factor	[more]

BLAST of MELO3C012884.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C012884.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BI13\|A0A1S3BI13_CUCME	2.6e-36	65.49	rho-N domain-containing protein 1, chloroplastic isoform X9 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S4DXI1\|A0A1S4DXI1_CUCME	2.6e-36	65.49	rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S3BIA8\|A0A1S3BIA8_CUCME	2.6e-36	65.49	rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S3BHF2\|A0A1S3BHF2_CUCME	2.6e-36	65.49	rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S3BHD7\|A0A1S3BHD7_CUCME	2.6e-36	65.49	rho-N domain-containing protein 1, chloroplastic isoform X3 OS=Cucumis melo OX=3...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012884.2.1	MELO3C012884.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34449	FAMILY NOT NAMED	coord: 29..140

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012884.2	Cucumber (Gy14) v2	cgybmedB177
MELO3C012884.2	Cucumber (Gy14) v2	cgybmedB184
MELO3C012884.2	Cucumber (Gy14) v1	cgymedB034
MELO3C012884.2	Cucumber (Gy14) v1	cgymedB428
MELO3C012884.2	Cucurbita maxima (Rimu)	cmamedB545
MELO3C012884.2	Cucurbita maxima (Rimu)	cmamedB648
MELO3C012884.2	Cucurbita moschata (Rifu)	cmomedB532
MELO3C012884.2	Cucurbita moschata (Rifu)	cmomedB636
MELO3C012884.2	Cucurbita pepo (Zucchini)	cpemedB270
MELO3C012884.2	Cucurbita pepo (Zucchini)	cpemedB822
MELO3C012884.2	Wild cucumber (PI 183967)	cpimedB199
MELO3C012884.2	Wild cucumber (PI 183967)	cpimedB204
MELO3C012884.2	Cucumber (Chinese Long) v2	cumedB198
MELO3C012884.2	Cucumber (Chinese Long) v2	cumedB205
MELO3C012884.2	Melon (DHL92) v3.6.1	medmedB135
MELO3C012884.2	Bottle gourd (USVL1VR-Ls)	lsimedB370
MELO3C012884.2	Bottle gourd (USVL1VR-Ls)	lsimedB373
MELO3C012884.2	Watermelon (Charleston Gray)	medwcgB342
MELO3C012884.2	Watermelon (97103) v1	medwmB355
MELO3C012884.2	Watermelon (97103) v1	medwmB367
MELO3C012884.2	Silver-seed gourd	carmedB0757
MELO3C012884.2	Silver-seed gourd	carmedB0785
MELO3C012884.2	Cucumber (Chinese Long) v3	cucmedB203
MELO3C012884.2	Cucumber (Chinese Long) v3	cucmedB209
MELO3C012884.2	Watermelon (97103) v2	medwmbB323
MELO3C012884.2	Watermelon (97103) v2	medwmbB337
MELO3C012884.2	Wax gourd	medwgoB397
MELO3C012884.2	Wax gourd	medwgoB402