MELO3C012882.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012882.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	cytoplasmic tRNA 2-thiolation protein 1-like
Location	chr04 : 13921905 .. 13922278 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTTTTTCTCCTGAAGGCCCTTGATAGAGTTGTTGCATTGTTGAAAGTAGTCAGGCTAGCCACGGGGCACAATGCAATTGATATGGTTGGAACAATTCTATTAAATATATTACGAGGTGATATTGCAAGGTATTTTAATAGTAAGACTTTTTTTTTCAATTACTTTATCCCTCATTTGGGTTGTATTAGACTAAAGTGATGCTTTGTATTTGTAGATTGAGTAGATGTACTAAATTAATTACCGATGAAGATGGACCAATTCCAAGATGCAAACCTTTCAAGTACACATATGGAAAGAAGATAGTAATATATTTTATATTTTGGTCTCATAGCTCTAGAGCAAGTCTTGCATCATGTAGCTTATTTTGA

mRNA sequence

ATGGAATTTTTTCTCCTGAAGGCCCTTGATAGAGTTGTTGCATTGTTGAAAGTAGTCAGGCTAGCCACGGGGCACAATGCAATTGATATGGTTGGAACAATTCTATTAAATATATTACGAGGTGATATTGCAAGATTGAGTAGATGTACTAAATTAATTACCGATGAAGATGGACCAATTCCAAGATGCAAACCTTTCAAGTACACATATGGAAAGAAGATAGTAATATATTTTATATTTTGGTCTCATAGCTCTAGAGCAAGTCTTGCATCATGTAGCTTATTTTGA

Coding sequence (CDS)

ATGGAATTTTTTCTCCTGAAGGCCCTTGATAGAGTTGTTGCATTGTTGAAAGTAGTCAGGCTAGCCACGGGGCACAATGCAATTGATATGGTTGGAACAATTCTATTAAATATATTACGAGGTGATATTGCAAGATTGAGTAGATGTACTAAATTAATTACCGATGAAGATGGACCAATTCCAAGATGCAAACCTTTCAAGTACACATATGGAAAGAAGATAGTAATATATTTTATATTTTGGTCTCATAGCTCTAGAGCAAGTCTTGCATCATGTAGCTTATTTTGA

Protein sequence

MEFFLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRCKPFKYTYGKKIVIYFIFWSHSSRASLASCSLF

Homology

[Close]

BLAST of MELO3C012882.2 vs. NCBI nr
Match: XP_008447661.1 (PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 8   ALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRCKPFK 67
           ALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRCKPFK
Sbjct: 80  ALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRCKPFK 139

[Close]

BLAST of MELO3C012882.2 vs. NCBI nr
Match: KVH95408.1 (Rossmann-like alpha/beta/alpha sandwich fold, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 116.7 bits (291), Expect = 4.3e-23
Identity = 60/79 (75.95%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +LATGHNA D+  T+LLNILRGDIARLSRCT +IT EDGPIPRC
Sbjct: 215 FRRQALDRGAALLKVDKLATGHNADDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRC 274

Query: 64  KPFKYTYGKKIVIY-FIFW 82
           KPFKYTY K+IVIY  IFW
Sbjct: 275 KPFKYTYEKEIVIYPSIFW 293

[Close]

BLAST of MELO3C012882.2 vs. NCBI nr
Match: XP_011649473.1 (PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Cucumis sativus] >KGN62283.1 hypothetical protein Csa_2G348210 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 9.6e-23
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +LATGHNA DM  T+LLNILRGDIARLSRCT +IT EDGPIPRC
Sbjct: 157 FRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRC 216

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 217 KPFKYTYEKEIVMYAYF 233

[Close]

BLAST of MELO3C012882.2 vs. NCBI nr
Match: XP_022144278.1 (cytoplasmic tRNA 2-thiolation protein 1 [Momordica charantia])

HSP 1 Score: 115.5 bits (288), Expect = 9.6e-23
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +LATGHNA DM  T+LLNILRGDIARLSRCT +IT EDGPIPRC
Sbjct: 157 FRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRC 216

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 217 KPFKYTYEKEIVMYAYF 233

[Close]

BLAST of MELO3C012882.2 vs. NCBI nr
Match: XP_022951723.1 (cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita moschata])

HSP 1 Score: 115.5 bits (288), Expect = 9.6e-23
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +LATGHNA DM  T+LLNILRGDIARLSRCT +IT EDGPIPRC
Sbjct: 157 FRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRC 216

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 217 KPFKYTYEKEIVMYAYF 233

[Close]

BLAST of MELO3C012882.2 vs. TAIR10
Match: AT1G76170.1 (2-thiocytidine tRNA biosynthesis protein, TtcA)

HSP 1 Score: 109.8 bits (273), Expect = 9.5e-25
Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +L TGHNA D+  T++LNILRGDIARLSRCT + T EDGPIPRC
Sbjct: 133 FRRQALDRGAALLKVDKLVTGHNADDIAETVVLNILRGDIARLSRCTSITTGEDGPIPRC 192

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 193 KPFKYTYEKEIVMYAYF 209

[Close]

BLAST of MELO3C012882.2 vs. TAIR10
Match: AT2G44270.2 (repressor of lrx1)

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-21
Identity = 48/67 (71.64%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +L TGHNA D+  T+LLNILRGDIARLSRCT + T EDGPIPRC
Sbjct: 165 FRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRC 224

Query: 64  KPFKYTY 71
           KPF +TY
Sbjct: 225 KPFNFTY 231

[Close]

BLAST of MELO3C012882.2 vs. Swiss-Prot
Match: sp|O64862|CTU1_ARATH (Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana OX=3702 GN=NCS6 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-24
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +L TGHNA D+  T+LLNILRGDIARLSRCT + T EDGPIPRC
Sbjct: 155 FRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRC 214

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 215 KPFKYTYEKEIVMYAYF 231

[Close]

BLAST of MELO3C012882.2 vs. Swiss-Prot
Match: sp|Q6Z6G6|CTU1_ORYSJ (Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NCS6 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.9e-23
Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV ++ TGHNA D+  T+LLNILRGDIARLSRCT + T EDGPIPRC
Sbjct: 161 FRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIPRC 220

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 221 KPFKYTYEKEIVMYAYF 237

[Close]

BLAST of MELO3C012882.2 vs. Swiss-Prot
Match: sp|Q05AW7|CTU1_XENLA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.3e-18
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR   +L + ++ TGHNA D+  T+L+N LRGDIARL RCT + T  +G IPRC
Sbjct: 146 FRRQALDRGAMMLGINKICTGHNADDIAETVLMNFLRGDIARLRRCTAITTGSEGAIPRC 205

Query: 64  KPFKYTYGKKIVIYFIF 81
           KP KYTY K+IV+Y  F
Sbjct: 206 KPLKYTYEKEIVLYAYF 222

[Close]

BLAST of MELO3C012882.2 vs. Swiss-Prot
Match: sp|Q94480|CTU1_DICDI (Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum OX=44689 GN=ctu1 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-17
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR   +LK  ++ TGHNA D+  T+L+N+LRGDI RL RC  +IT  +G +PR 
Sbjct: 154 FRRQALDRGAVMLKANKIVTGHNADDIAETVLMNLLRGDIPRLQRCVNIITGSEGALPRS 213

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 214 KPFKYTYQKEIVMYAYF 230

[Close]

BLAST of MELO3C012882.2 vs. Swiss-Prot
Match: sp|Q5FW05|CTU1_XENTR (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-17
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR   +L V ++ TGHNA D+  T+L+N LRGDIARL RCT + T  +G IPRC
Sbjct: 146 FRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGDIARLRRCTSITTGSEGAIPRC 205

Query: 64  KPFKYTYGKKIVIYFIF 81
           KP KY Y K+IV+Y  F
Sbjct: 206 KPLKYAYEKEIVLYAYF 222

[Close]

BLAST of MELO3C012882.2 vs. TrEMBL
Match: tr|A0A1S3BIV7|A0A1S3BIV7_CUCME (cytoplasmic tRNA 2-thiolation protein 1-like OS=Cucumis melo OX=3656 GN=LOC103490070 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 8   ALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRCKPFK 67
           ALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRCKPFK
Sbjct: 80  ALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRCKPFK 139

[Close]

BLAST of MELO3C012882.2 vs. TrEMBL
Match: tr|A0A103XR73|A0A103XR73_CYNCS (Rossmann-like alpha/beta/alpha sandwich fold (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_002507 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-23
Identity = 60/79 (75.95%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +LATGHNA D+  T+LLNILRGDIARLSRCT +IT EDGPIPRC
Sbjct: 215 FRRQALDRGAALLKVDKLATGHNADDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRC 274

Query: 64  KPFKYTYGKKIVIY-FIFW 82
           KPFKYTY K+IVIY  IFW
Sbjct: 275 KPFKYTYEKEIVIYPSIFW 293

[Close]

BLAST of MELO3C012882.2 vs. TrEMBL
Match: tr|A0A0A0LKF0|A0A0A0LKF0_CUCSA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis sativus OX=3659 GN=NCS6 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.3e-23
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +LATGHNA DM  T+LLNILRGDIARLSRCT +IT EDGPIPRC
Sbjct: 157 FRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRC 216

Query: 64  KPFKYTYGKKIVIYFIF 81
           KPFKYTY K+IV+Y  F
Sbjct: 217 KPFKYTYEKEIVMYAYF 233

[Close]

BLAST of MELO3C012882.2 vs. TrEMBL
Match: tr|A0A251RKY3|A0A251RKY3_HELAN (Putative 2-thiocytidine tRNA biosynthesis protein, TtcA OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0533361 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F  +ALDR  ALLKV +LATGHNA D+  T+LLNILRGDIARLSRCT +IT EDGPIPRC
Sbjct: 155 FRRQALDRGAALLKVDKLATGHNADDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRC 214

Query: 64  KPFKYTYGKKIVIY 78
           KPFKYTY K+IVIY
Sbjct: 215 KPFKYTYEKEIVIY 228

[Close]

BLAST of MELO3C012882.2 vs. TrEMBL
Match: tr|A0A0D3D124|A0A0D3D124_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 4   FLLKALDRVVALLKVVRLATGHNAIDMVGTILLNILRGDIARLSRCTKLITDEDGPIPRC 63
           F +KALDR  ALLKV +L TGHNA D+  T+LLNILRGDIARLSRCT + T EDGPIPRC
Sbjct: 132 FFVKALDRGAALLKVDKLVTGHNADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRC 191

Query: 64  KPFKYTYGKKIVIY 78
           KPFKYTY K+IVIY
Sbjct: 192 KPFKYTYEKEIVIY 205

The following BLAST results are available for this feature:

BLAST of MELO3C012882.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447661.1	2.3e-24	100.00	PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis melo]	[more]
KVH95408.1	4.3e-23	75.95	Rossmann-like alpha/beta/alpha sandwich fold, partial [Cynara cardunculus var. s...	[more]
XP_011649473.1	9.6e-23	75.32	PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Cucumis sativus] >KGN62283.1...	[more]
XP_022144278.1	9.6e-23	75.32	cytoplasmic tRNA 2-thiolation protein 1 [Momordica charantia]	[more]
XP_022951723.1	9.6e-23	75.32	cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita moschata]	[more]

BLAST of MELO3C012882.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76170.1	9.5e-25	70.13	2-thiocytidine tRNA biosynthesis protein, TtcA	[more]
AT2G44270.2	1.7e-21	71.64	repressor of lrx1	[more]

BLAST of MELO3C012882.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O64862\|CTU1_ARATH	5.9e-24	71.43	Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana OX=3702 GN=NCS6 ...	[more]
sp\|Q6Z6G6\|CTU1_ORYSJ	2.9e-23	70.13	Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica OX=39947...	[more]
sp\|Q05AW7\|CTU1_XENLA	6.3e-18	55.84	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 S...	[more]
sp\|Q94480\|CTU1_DICDI	1.4e-17	54.55	Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum OX=44689 GN=...	[more]
sp\|Q5FW05\|CTU1_XENTR	1.4e-17	55.84	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE...	[more]

BLAST of MELO3C012882.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BIV7\|A0A1S3BIV7_CUCME	1.5e-24	100.00	cytoplasmic tRNA 2-thiolation protein 1-like OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A103XR73\|A0A103XR73_CYNCS	2.8e-23	75.95	Rossmann-like alpha/beta/alpha sandwich fold (Fragment) OS=Cynara cardunculus va...	[more]
tr\|A0A0A0LKF0\|A0A0A0LKF0_CUCSA	6.3e-23	75.32	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis sativus OX=3659 GN=NCS6 PE=3 ...	[more]
tr\|A0A251RKY3\|A0A251RKY3_HELAN	1.1e-22	77.03	Putative 2-thiocytidine tRNA biosynthesis protein, TtcA OS=Helianthus annuus OX=...	[more]
tr\|A0A0D3D124\|A0A0D3D124_BRAOL	1.1e-22	75.68	Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000049	tRNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0034227	tRNA thio-modification
GO:0002098	tRNA wobble uridine modification

Vocabulary: **INTERPRO**
Term	Definition
IPR000541	Ncs6/Tuc1/Ctu1
IPR014729	Rossmann-like_a/b/a_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0034227	tRNA thio-modification
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0020037	heme binding
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0000049	tRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012882.2.1	MELO3C012882.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 2..88 e-value: 1.3E-10 score: 42.9
IPR000541	Cytoplasmic tRNA 2-thiolation protein 1	PANTHER	PTHR11807:SF12	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1	coord: 4..80
None	No IPR available	PANTHER	PTHR11807	ATPASES OF THE PP SUPERFAMILY-RELATED	coord: 4..80
None	No IPR available	SUPERFAMILY	SSF52402	Adenine nucleotide alpha hydrolases-like	coord: 6..80

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012882.2	Cucumber (Gy14) v2	cgybmedB177
MELO3C012882.2	Cucumber (Gy14) v2	cgybmedB184
MELO3C012882.2	Cucumber (Gy14) v1	cgymedB034
MELO3C012882.2	Cucumber (Gy14) v1	cgymedB428
MELO3C012882.2	Cucurbita maxima (Rimu)	cmamedB545
MELO3C012882.2	Cucurbita maxima (Rimu)	cmamedB648
MELO3C012882.2	Cucurbita moschata (Rifu)	cmomedB532
MELO3C012882.2	Cucurbita moschata (Rifu)	cmomedB636
MELO3C012882.2	Cucurbita pepo (Zucchini)	cpemedB270
MELO3C012882.2	Cucurbita pepo (Zucchini)	cpemedB822
MELO3C012882.2	Wild cucumber (PI 183967)	cpimedB199
MELO3C012882.2	Wild cucumber (PI 183967)	cpimedB204
MELO3C012882.2	Cucumber (Chinese Long) v2	cumedB198
MELO3C012882.2	Cucumber (Chinese Long) v2	cumedB205
MELO3C012882.2	Melon (DHL92) v3.6.1	medmedB135
MELO3C012882.2	Bottle gourd (USVL1VR-Ls)	lsimedB370
MELO3C012882.2	Bottle gourd (USVL1VR-Ls)	lsimedB373
MELO3C012882.2	Watermelon (Charleston Gray)	medwcgB342
MELO3C012882.2	Watermelon (97103) v1	medwmB355
MELO3C012882.2	Watermelon (97103) v1	medwmB367
MELO3C012882.2	Silver-seed gourd	carmedB0757
MELO3C012882.2	Silver-seed gourd	carmedB0785
MELO3C012882.2	Cucumber (Chinese Long) v3	cucmedB203
MELO3C012882.2	Cucumber (Chinese Long) v3	cucmedB209
MELO3C012882.2	Watermelon (97103) v2	medwmbB323
MELO3C012882.2	Watermelon (97103) v2	medwmbB337
MELO3C012882.2	Wax gourd	medwgoB397
MELO3C012882.2	Wax gourd	medwgoB402