MELO3C012870.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C012870.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionalanine--tRNA ligase-like
Locationchr04 : 13673891 .. 13675635 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACACTTTACTCTTTTCTCCTTTCTTCTCTACCAAACCCTACGAAGGTTTTCTCTCAACATTTCTTCCCTTTCTTGCTTTCTCAATCTCATCACTTTCTCCCCTCTCTTCTCTGATCAGTCGCCAACGCGTGTGAACTCGATCGCCGTGCTATCATCGGAGGCAGCTTCTTCCGTTGCCGCATCGCGCTCGTGCCTCACGTGGAACACTCACCCTCCTCACCACCGGCACGTTACTGGCTCGGGATGTCTGGTAAATGAATATAGAAAATATTAAATATTATATTTCTTGCGTATTGTGTGGTTCTGGATTGAGAGAGTGGAAGAATTCAGTGTATGGGGTTGTGGAATTTAATGGGGTTTAATGGGTTTTACGAAGATTCTTTATTGAATGTATACATGAATTGATTGTTGTGCTTGAGACAGATGGGTTTCTGTTGTAGGTATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACACAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCTGGGAACTTCTTACTCAGGTTAGTCGACTTTTACACTCAGAAATAATTGTTTTTCTGAAATTGTGTAATGTTGAGAGTTATTATTTTAGCTTTATAGTTTACGAGTCATAATTTACAATTCTACTTCTTGTATCGCCTTCTCACAAACAGTGTGGTTTGATGCAGTCCATTAGTCCTTTTGTTTTGCTACTTTTCAGCTTGCGAACAACCCTTCTACTTATTACACGTGCTAGCTACTGTAATGTAGAAATCATTTTATCTGTCTTGTACAATACAGTCCATCAGTCTTTTTGTTTGTAGCAAATGTTTCTGGGGTAGGGAATGCGTGTAATGAAGCTTAAGGGCATAGATAAGAGAGAAAGGATCACCAGCTTTGCAATTGAACTTGTGTAATGTCAAATTATAAAAAGCTCCTAGATCATCCTCAATACAATGATTGTGGAAATTGCATTGCTCTGTAATTGTGGTATGGCTGAATTTATATCAGTTGATTGTGTTTTCTCATAATCGTTGCGCTTGTGAACCGATAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATATGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGTAAGATTACCTAACAATTTCTCTTTCTTTTTTGGTCTTGCAAGCTACAACTACAAATGTCTTGTTATCTATCTGAAATCTGAAGCTGGTATAAAAAATATGTTAAACTTCTCGTTTCTTTATGCTGCAGAAGCTTCAATTATCAAAGAAAACAAAAATCAGTGAACAATTGTGTCCATCTCTGTGTGTGTGTTTGTGTGTGTGTATGTGTGTGTGTGTTCAATTCATGTCAGCTCTTGGAACTTTTGTCTAATTTTATTCTTTGATTTTGAGCAGGACAATTTCTGGGAGATGGGTGATACTGGCCCTTGTGGATAGACTATTAGAAAGTAAATTATTCTTATTAGTTGCACAATTAATTATTAACAATATGGGTGATAGTTGCTTCTCTTATCATTGTTAAATATTGAT

mRNA sequence

CTACACTTTACTCTTTTCTCCTTTCTTCTCTACCAAACCCTACGAAGGTTTTCTCTCAACATTTCTTCCCTTTCTTGCTTTCTCAATCTCATCACTTTCTCCCCTCTCTTCTCTGATCAGTCGCCAACGCGTGTGAACTCGATCGCCGTGCTATCATCGGAGGCAGCTTCTTCCGTTGCCGCATCGCGCTCGTGCCTCACGTGGAACACTCACCCTCCTCACCACCGGCACGTTACTGGCTCGGGATGTCTGGTAAATGAATATAGAAAATATTAAATATTATATTTCTTGCGTATTGTGTGGTTCTGGATTGAGAGAGTGGAAGAATTCAGTGTATGGGGTTGTGGAATTTAATGGGGTTTAATGGGTTTTACGAAGATTCTTTATTGAATGTATACATGAATTGATTGTTGTGCTTGAGACAGATGGGTTTCTGTTGTAGGTATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACACAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCTGGGAACTTCTTACTCAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATATGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGACAATTTCTGGGAGATGGGTGATACTGGCCCTTGTGGATAGACTATTAGAAAGTAAATTATTCTTATTAGTTGCACAATTAATTATTAACAATATGGGTGATAGTTGCTTCTCTTATCATTGTTAAATATTGAT

Coding sequence (CDS)

ATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACACAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCTGGGAACTTCTTACTCAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATATGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGACAATTTCTGGGAGATGGGTGATACTGGCCCTTGTGGATAG

Protein sequence

MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERVLPFGCKDNFWEMGDTGPCG
Homology
[Close]
BLAST of MELO3C012870.2 vs. NCBI nr
Match: XP_008461868.1 (PREDICTED: alanine--tRNA ligase-like [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 8.6e-81
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV
Sbjct: 186 FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 245

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 246 LPFGCKDNFWEMGDTGPCG 264

[Close]
BLAST of MELO3C012870.2 vs. NCBI nr
Match: XP_022153157.1 (alanine--tRNA ligase [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 3.6e-79
Identity = 134/139 (96.40%), Postives = 135/139 (97.12%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGT DPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTADPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLTQVYKLPTDR YATYFGGDEKAGLAPDNEARDIWLKFLPAERV
Sbjct: 186 FGDYFKKEAIEWAWELLTQVYKLPTDRFYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 245

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 246 LPFGCKDNFWEMGDTGPCG 264

[Close]
BLAST of MELO3C012870.2 vs. NCBI nr
Match: XP_016900399.1 (PREDICTED: alanine--tRNA ligase-like [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 6.2e-79
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV
Sbjct: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120

Query: 121 LPFGCKDNFWEMGDT 136
           LPFGCKDNFWEMGDT
Sbjct: 121 LPFGCKDNFWEMGDT 135

[Close]
BLAST of MELO3C012870.2 vs. NCBI nr
Match: XP_004148575.2 (PREDICTED: alanine--tRNA ligase [Cucumis sativus] >KGN58521.1 hypothetical protein Csa_3G656490 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 1.8e-78
Identity = 133/139 (95.68%), Postives = 135/139 (97.12%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLP DRIYATYFGGDEKAGLAPD EARD+WL FLPAERV
Sbjct: 186 FGDYFKKEAITWAWELLTQVYKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNFLPAERV 245

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 246 LPFGCKDNFWEMGDTGPCG 264

[Close]
BLAST of MELO3C012870.2 vs. NCBI nr
Match: XP_022934816.1 (alanine--tRNA ligase-like [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 5.2e-78
Identity = 131/139 (94.24%), Postives = 135/139 (97.12%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGT DPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 131 MNQFKPIFLGTADPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 190

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLPTDR YATYFGGDEKAGLAPD E+RD+WL+FLPAERV
Sbjct: 191 FGDYFKKEAITWAWELLTQVYKLPTDRFYATYFGGDEKAGLAPDTESRDMWLEFLPAERV 250

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 251 LPFGCKDNFWEMGDTGPCG 269

[Close]
BLAST of MELO3C012870.2 vs. TAIR10
Match: AT1G50200.1 (Alanyl-tRNA synthetase)

HSP 1 Score: 288.1 bits (736), Expect = 2.9e-78
Identity = 126/139 (90.65%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGT DPNT LSKL+RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 100 MNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 159

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLT+VY LPTDRIYATYFGGDEKAGL PDNEARDIWLK LP+ RV
Sbjct: 160 FGDYFKKEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRV 219

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 220 LPFGCKDNFWEMGDTGPCG 238

[Close]
BLAST of MELO3C012870.2 vs. TAIR10
Match: AT5G22800.1 (Alanyl-tRNA synthetase, class IIc)

HSP 1 Score: 117.5 bits (293), Expect = 6.7e-27
Identity = 64/135 (47.41%), Postives = 80/135 (59.26%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           M QFKPIFLG V       ++  A   Q+CI    R NDL++VGK   HHTFFEMLGN+S
Sbjct: 118 MLQFKPIFLGKVP-----REVPCATTAQRCI----RTNDLENVGKTARHHTFFEMLGNFS 177

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLK--FLPAE 120
           FGDYFKKEAI WAWEL T  + LP +R++ + +          D+EA +IW     +  E
Sbjct: 178 FGDYFKKEAIKWAWELSTIEFGLPANRVWVSIY--------EDDDEAFEIWKNEVGVSVE 235

Query: 121 RVLPFGCKDNFWEMG 134
           R+   G  DNFW  G
Sbjct: 238 RIKRMGEADNFWTSG 235

[Close]
BLAST of MELO3C012870.2 vs. Swiss-Prot
Match: sp|P36428|SYA_ARATH (Alanine--tRNA ligase OS=Arabidopsis thaliana OX=3702 GN=ALATS PE=1 SV=3)

HSP 1 Score: 288.1 bits (736), Expect = 5.2e-77
Identity = 126/139 (90.65%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGT DPNT LSKL+RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 100 MNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 159

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLT+VY LPTDRIYATYFGGDEKAGL PDNEARDIWLK LP+ RV
Sbjct: 160 FGDYFKKEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRV 219

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 220 LPFGCKDNFWEMGDTGPCG 238

[Close]
BLAST of MELO3C012870.2 vs. Swiss-Prot
Match: sp|Q54Y20|SYAC_DICDI (Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=alaS PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.3e-63
Identity = 104/139 (74.82%), Postives = 120/139 (86.33%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLG V+P +  +KL RA N+QKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 43  MNQFKPIFLGQVNPKSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 102

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FG+YFKKEAITWAWELLT+VYKL  +R+Y TYF GD + GL  D EA+++WL++LP ERV
Sbjct: 103 FGNYFKKEAITWAWELLTEVYKLDKERLYVTYFRGDPEKGLEADLEAKNLWLQYLPEERV 162

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFG K+NFWEMGD GPCG
Sbjct: 163 LPFGMKENFWEMGDQGPCG 181

[Close]
BLAST of MELO3C012870.2 vs. Swiss-Prot
Match: sp|O01541|SYAC_CAEEL (Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=aars-2 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.0e-61
Identity = 102/140 (72.86%), Postives = 115/140 (82.14%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKP+FLG  DPN+ L+KL RA NTQKCI AGG+HNDLDDVGKD YHHT+FEMLGNWS
Sbjct: 46  MNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWS 105

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKF-LPAER 120
           FGDYFKKE ITWAWELLT VY +P +R+Y + FGGDE  G+  D+EARDIW    +P ER
Sbjct: 106 FGDYFKKEIITWAWELLTTVYGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDER 165

Query: 121 VLPFGCKDNFWEMGDTGPCG 140
           +L FG KDNFWEMGD GPCG
Sbjct: 166 ILNFGMKDNFWEMGDVGPCG 185

[Close]
BLAST of MELO3C012870.2 vs. Swiss-Prot
Match: sp|Q9VLM8|SYAC_DROME (Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Aats-ala PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 8.3e-59
Identity = 99/140 (70.71%), Postives = 109/140 (77.86%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGT DPN+ +SK  R  NTQKCI AGG+HNDLDDVGKD YHHTFFEMLGNWS
Sbjct: 45  MNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWS 104

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKF-LPAER 120
           FGDYFKKE  +WAWE LTQ   LP DR+Y TYFGGD  +GL PD E + +WL   L  E 
Sbjct: 105 FGDYFKKEICSWAWEFLTQRLALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEH 164

Query: 121 VLPFGCKDNFWEMGDTGPCG 140
           +LP   KDNFWEMG+TGPCG
Sbjct: 165 ILPGSMKDNFWEMGETGPCG 184

[Close]
BLAST of MELO3C012870.2 vs. Swiss-Prot
Match: sp|Q5A8K2|SYA_CANAL (Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ALA1 PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58
Identity = 98/140 (70.00%), Postives = 116/140 (82.86%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGTVDP +  + L RA N+QKCI AGG+HNDL+DVG+D+YHHTFFEMLGNWS
Sbjct: 65  MNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWS 124

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKF-LPAER 120
           FGDYFKKEAI ++WELLT+VY L  DR+Y TYFGGDEK GL PD EA++ WLK  +P + 
Sbjct: 125 FGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDH 184

Query: 121 VLPFGCKDNFWEMGDTGPCG 140
           +LP   +DNFWEMGD GPCG
Sbjct: 185 ILPGSVEDNFWEMGDQGPCG 204

[Close]
BLAST of MELO3C012870.2 vs. TrEMBL
Match: tr|A0A1S3CFQ7|A0A1S3CFQ7_CUCME (alanine--tRNA ligase-like OS=Cucumis melo OX=3656 GN=LOC103500363 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 5.7e-81
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV
Sbjct: 186 FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 245

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 246 LPFGCKDNFWEMGDTGPCG 264

[Close]
BLAST of MELO3C012870.2 vs. TrEMBL
Match: tr|A0A1S4DWP3|A0A1S4DWP3_CUCME (alanine--tRNA ligase-like OS=Cucumis melo OX=3656 GN=LOC103490068 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.1e-79
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV
Sbjct: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120

Query: 121 LPFGCKDNFWEMGDT 136
           LPFGCKDNFWEMGDT
Sbjct: 121 LPFGCKDNFWEMGDT 135

[Close]
BLAST of MELO3C012870.2 vs. TrEMBL
Match: tr|A0A0A0LEP6|A0A0A0LEP6_CUCSA (Alanine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_3G656490 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78
Identity = 133/139 (95.68%), Postives = 135/139 (97.12%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLP DRIYATYFGGDEKAGLAPD EARD+WL FLPAERV
Sbjct: 186 FGDYFKKEAITWAWELLTQVYKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNFLPAERV 245

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 246 LPFGCKDNFWEMGDTGPCG 264

[Close]
BLAST of MELO3C012870.2 vs. TrEMBL
Match: tr|A0A251RAC5|A0A251RAC5_PRUPE (Alanine--tRNA ligase OS=Prunus persica OX=3760 GN=PRUPE_1G345900 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.5e-77
Identity = 130/139 (93.53%), Postives = 132/139 (94.96%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLG  DPNT LSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 125 MNQFKPIFLGAADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 184

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLTQVYKLP DRIYATYFGGDEKAGLAPDNEARDIWLKFLP+ RV
Sbjct: 185 FGDYFKKEAIGWAWELLTQVYKLPEDRIYATYFGGDEKAGLAPDNEARDIWLKFLPSARV 244

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 245 LPFGCKDNFWEMGDTGPCG 263

[Close]
BLAST of MELO3C012870.2 vs. TrEMBL
Match: tr|A0A067LGK7|A0A067LGK7_JATCU (Alanine--tRNA ligase OS=Jatropha curcas OX=180498 GN=JCGZ_24210 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 8.6e-77
Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0 

Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGT DPNT+LSKL RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 116 MNQFKPIFLGTADPNTALSKLIRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 175

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLT+VYKLPTDRIYATYFGGD+KAGLAPDNEARDIWL+FLP ER+
Sbjct: 176 FGDYFKKEAIEWAWELLTKVYKLPTDRIYATYFGGDDKAGLAPDNEARDIWLQFLPPERI 235

Query: 121 LPFGCKDNFWEMGDTGPCG 140
           LPFGCKDNFWEMGDTGPCG
Sbjct: 236 LPFGCKDNFWEMGDTGPCG 254

The following BLAST results are available for this feature:
BLAST of MELO3C012870.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461868.18.6e-8198.56PREDICTED: alanine--tRNA ligase-like [Cucumis melo][more]
XP_022153157.13.6e-7996.40alanine--tRNA ligase [Momordica charantia][more]
XP_016900399.16.2e-79100.00PREDICTED: alanine--tRNA ligase-like [Cucumis melo][more]
XP_004148575.21.8e-7895.68PREDICTED: alanine--tRNA ligase [Cucumis sativus] >KGN58521.1 hypothetical prote... [more]
XP_022934816.15.2e-7894.24alanine--tRNA ligase-like [Cucurbita moschata][more]
BLAST of MELO3C012870.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G50200.12.9e-7890.65Alanyl-tRNA synthetase[more]
AT5G22800.16.7e-2747.41Alanyl-tRNA synthetase, class IIc[more]
BLAST of MELO3C012870.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P36428|SYA_ARATH5.2e-7790.65Alanine--tRNA ligase OS=Arabidopsis thaliana OX=3702 GN=ALATS PE=1 SV=3[more]
sp|Q54Y20|SYAC_DICDI3.3e-6374.82Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=alaS P... [more]
sp|O01541|SYAC_CAEEL4.0e-6172.86Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=aars-2 PE... [more]
sp|Q9VLM8|SYAC_DROME8.3e-5970.71Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Aats-ala... [more]
sp|Q5A8K2|SYA_CANAL1.1e-5870.00Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=2375... [more]
BLAST of MELO3C012870.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFQ7|A0A1S3CFQ7_CUCME5.7e-8198.56alanine--tRNA ligase-like OS=Cucumis melo OX=3656 GN=LOC103500363 PE=4 SV=1[more]
tr|A0A1S4DWP3|A0A1S4DWP3_CUCME4.1e-79100.00alanine--tRNA ligase-like OS=Cucumis melo OX=3656 GN=LOC103490068 PE=4 SV=1[more]
tr|A0A0A0LEP6|A0A0A0LEP6_CUCSA1.2e-7895.68Alanine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_3G656490 PE=3 SV=1[more]
tr|A0A251RAC5|A0A251RAC5_PRUPE6.5e-7793.53Alanine--tRNA ligase OS=Prunus persica OX=3760 GN=PRUPE_1G345900 PE=3 SV=1[more]
tr|A0A067LGK7|A0A067LGK7_JATCU8.6e-7792.09Alanine--tRNA ligase OS=Jatropha curcas OX=180498 GN=JCGZ_24210 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004813alanine-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006419alanyl-tRNA aminoacylation
Vocabulary: INTERPRO
TermDefinition
IPR018165Ala-tRNA-synth_IIc_core
IPR018164Ala-tRNA-synth_IIc_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006419 alanyl-tRNA aminoacylation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004813 alanine-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012870.2.1MELO3C012870.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 1..139
e-value: 5.4E-61
score: 206.6
NoneNo IPR availableGENE3DG3DSA:3.30.930.10coord: 1..139
e-value: 1.5E-66
score: 226.4
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 1..139
NoneNo IPR availablePANTHERPTHR11777:SF8ALANINE--TRNA LIGASE, MITOCHONDRIALcoord: 1..139
NoneNo IPR availableSUPERFAMILYSSF55681Class II aaRS and biotin synthetasescoord: 1..139
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..139
score: 28.796

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C012870.2Cucumber (Chinese Long) v3cucmedB203
MELO3C012870.2Cucumber (Chinese Long) v3cucmedB209
MELO3C012870.2Watermelon (97103) v2medwmbB323
MELO3C012870.2Watermelon (97103) v2medwmbB337
MELO3C012870.2Wax gourdmedwgoB397
MELO3C012870.2Wax gourdmedwgoB402
MELO3C012870.2Cucumber (Gy14) v2cgybmedB177
MELO3C012870.2Cucumber (Gy14) v2cgybmedB184
MELO3C012870.2Cucumber (Gy14) v1cgymedB428
MELO3C012870.2Cucurbita maxima (Rimu)cmamedB545
MELO3C012870.2Cucurbita maxima (Rimu)cmamedB648
MELO3C012870.2Cucurbita moschata (Rifu)cmomedB532
MELO3C012870.2Cucurbita moschata (Rifu)cmomedB636
MELO3C012870.2Cucurbita pepo (Zucchini)cpemedB270
MELO3C012870.2Cucurbita pepo (Zucchini)cpemedB822
MELO3C012870.2Wild cucumber (PI 183967)cpimedB199
MELO3C012870.2Wild cucumber (PI 183967)cpimedB204
MELO3C012870.2Cucumber (Chinese Long) v2cumedB198
MELO3C012870.2Cucumber (Chinese Long) v2cumedB205
MELO3C012870.2Melon (DHL92) v3.6.1medmedB135
MELO3C012870.2Bottle gourd (USVL1VR-Ls)lsimedB370
MELO3C012870.2Bottle gourd (USVL1VR-Ls)lsimedB373
MELO3C012870.2Watermelon (Charleston Gray)medwcgB342
MELO3C012870.2Watermelon (97103) v1medwmB355
MELO3C012870.2Watermelon (97103) v1medwmB367
MELO3C012870.2Silver-seed gourdcarmedB0757
MELO3C012870.2Silver-seed gourdcarmedB0785